Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_003494.1 Length=111362 Score E Sequences producing significant alignments: (Bits) Value seq2454 165 6e-36 >seq2454 Length=202813 Score = 165 bits (182), Expect = 6e-36 Identities = 179/235 (76%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 91799 CATTTCCCTGTCTTTTCCTGCAAAGAGGACTACAACATCATCATGGACACTGTCAGACAA 91858 || ||||| |||||||||||| ||||||| || ||||||| ||||| | | ||| Sbjct 28261 CACTTCCCCACCTTTTCCTGCAAGGAGGACTGCACGATCATCACAGACACAG-CGTCCAA 28319 Query 91859 -CTGGAACAAAGTGGCTTCTACTGGGGTCCTTTGGGGGTCGAGGAGGCACATCGTATGCT 91917 || || | || | |||||||||||| ||| |||| || ||||| || ||||| ||||| Sbjct 28320 GCTCGAGCGCAGCGCCTTCTACTGGGGCCCTCTGGGAGTGGAGGACGCCCATCGCATGCT 28379 Query 91918 GCGCAACTCGGCACTGGGCAGCTTTCTCATTCGGGATAGCAGGCAAAAGGACGTCTTGTT 91977 ||| || | | ||||||||||| ||||| || || ||| |||| || |||||||| || Sbjct 28380 GCGGGACGCTCCGCTGGGCAGCTTCCTCATCCGCGACAGCCGGCAGAAAGACGTCTTCTT 28439 Query 91978 CACGCTGTCGTATCACTCTGTGACCGGACCCGTCAGTGTGAGGATTGAATACAAG 92032 ||||||||| || ||||| || ||| || ||||| ||| | || || |||||| Sbjct 28440 CACGCTGTCCTACCACTCCAAGAACGGGCCGGTCAGCGTGCGCATCGACTACAAG 28494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 356154591617794