Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_024447.1 Length=282356 Score E Sequences producing significant alignments: (Bits) Value seq2467 87.8 3e-12 >seq2467 Length=72583 Score = 87.8 bits (96), Expect = 3e-12 Identities = 113/156 (72%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 58385 TGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCATACTTAGG 58444 |||||||| | | ||||| || || || || | || |||||||||||||| || ||| Sbjct 5092 TGGTGGTATTTCGTCTCTAAGGGCATCGAGTATCTGGACACAGTGTTTTTCATCCTGAGG 5151 Query 58445 AAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGTTTACTTTA 58504 ||||| || || || |||| || || ||||| || || || | || ||||| || | Sbjct 5152 AAAAAATTCAACCAGGTTACTTTCCTGCACGTCTACCACCACTGCACCATGTTCACGCTC 5211 Query 58505 GGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540 | ||| | || || |||||| | |||||||| ||| Sbjct 5212 TGGTGGATCGGCATCAAATGGGTGGCAGGAGGACAG 5247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 903205696537280