Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maccullochella_20peelii_20[genbank_20GCA_5F002120245.1_202017-05-09] 18,198 sequences; 633,241,041 total letters Query= NC_028094.1 Length=473558 Score E Sequences producing significant alignments: (Bits) Value seq2667 248 3e-60 seq4434 149 2e-30 seq3162 145 2e-29 seq6074 140 1e-27 seq2860 114 4e-20 seq290 105 2e-17 seq1043 100 9e-16 seq76 100 9e-16 >seq2667 Length=57246 Score = 248 bits (274), Expect = 3e-60 Identities = 952/1477 (64%), Gaps = 25/1477 (2%) Strand=Plus/Minus Query 349200 CTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGTG 349259 |||| || || ||| | || || || ||||||||||||| ||| || ||| | Sbjct 20756 CTATTGGCATTGATCTGGGCACCACCTATTCTTGTGTTGGGATTTTCCAGCATGGCAAAG 20697 Query 349260 TAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACCG 349319 | || || || || || || || || ||||| || || || || || || ||||||| Sbjct 20696 TTGAGATCATCGCCAACGACCAGGGCAACAGGACCACTCCCAGCTATGTGGCCTTTACCG 20637 Query 349320 AAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAATA 349379 | || ||| | | ||||| ||| ||| || || || | |||| || || | || | Sbjct 20636 ACACAGAGAGGCTCATTGGAGATGGTGCCAAGAACCAGGTTGCTATGAACCCCACCAACA 20577 Query 349380 CGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGA--CAAATCTACACAATC 349437 | | |||||||| || || || ||||| |||| ||| || | | | | || || Sbjct 20576 CAATCTTTGATGCCAAACGGCTAATTGGGAGAAAGTTTAACGATGCCATTGTCCAG--TC 20519 Query 349438 TGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTATTGA 349497 || | |||| | ||||| | || | || | ||| || || || | | | Sbjct 20518 CGACATGAAACTCTGGCCTTTCAAGGT-GATC--AGTGACAATGGAAAGCCCAAAGTCCA 20462 Query 349498 GGTTGAATATAAAGGTGA-ACAAAAACAATTTTTACCC-GAAGAAATTTCATCAATGGTT 349555 ||| || |||||||| || || || | || ||||| || ||||| || || ||||| Sbjct 20461 GGTGGAGTATAAAGGGGAGACCAAGGCC--TTCTACCCAGAGGAAATCTCCTCCATGGTC 20404 Query 349556 TTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGCTGTT 349615 | |||||||||||||| || ||||| || || | || | | || | |||| || Sbjct 20403 CTGGTTAAAATGAAGGAGATCGCTGAGGCCTACCTGGGACAGAGGGTGTCAAATGCAGTC 20344 Query 349616 ATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGGCAGC 349675 || || || ||||| ||||| ||||| | ||| | || || || || || || Sbjct 20343 ATCACAGTTCCAGCTTATTTCAATGACTCTCAGAGGCAAGCCACCAAGGACGCCGGGGTG 20284 Query 349676 ATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGCATAT 349735 || | || | ||||| || || || || || || ||||| || ||||| || || ||| Sbjct 20283 ATCTCTGGACTGAATGTCCTGAGGATCATCAACGAGCCCACAGCAGCAGCCATAGCCTAT 20224 Query 349736 GGGCTTGATAAAA-TGAGTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTGGTGG 349794 || || |||||| | | || | || ||| | || || |||||| | ||||| || Sbjct 20223 GGCCTGGATAAAGGTAAAAGAGGA-GAGCGCAATGTGCTCATCTTTGATCTCGGTGGAGG 20165 Query 349795 TACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAACTGC 349854 || ||||| || || | || || |||| || || || ||||| || ||| | || || Sbjct 20164 CACCTTTGACGTGTCCATTCTGACCATTGAGGACGGCATCTTTGAGGTGAAATCCACCGC 20105 Query 349855 TGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTGTTAA 349914 || || ||||| |||||||| || || ||||| || || | || || ||||| | Sbjct 20104 AGGAGACACACACCTTGGTGGGGAGGACTTTGACAACCGGATGGTCAACCACTTTGTAGA 20045 Query 349915 AGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTCGCCT 349974 |||||||| | || || | || || | | ||| |||||| || | | || Sbjct 20044 GGAATTTAAAAGAAAACACAAGAAGGACATCAGCCAAAATAAGAGAGCAGTGAGGAGACT 19985 Query 349975 AAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTATTGA 350034 | || || ||||| | || ||| | || | || || | ||||| | ||||| Sbjct 19984 GCGTACAGCTTGTGAGAGAGCGAAGAGGACCCTGTCCTCCAGCACCCAGGCTAGCATTGA 19925 Query 350035 AATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGTTTGA 350094 || || ||||| ||| |||| || |||| |||| || ||| | || || ||||| Sbjct 19924 GATCGACTCTCTGTTTGAGGGCATTGACTTCTACACATCCATCACAAGGGCACGCTTTGA 19865 Query 350095 AGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAAAAGA 350154 || ||| || || || |||| |||| |||| || || || || | | |||| Sbjct 19864 GGAGTTAAACTCTGAGCTCTTCAGAGGAACACTGGAACCAGTTGAGAAGGCCCTGCAAGA 19805 Query 350155 TGCAAAAATGTCCAAAAATC--AGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGT 350212 ||| || || | || || |||| |||| | || | |||||||| || ||| | Sbjct 19804 TGCCAAGCTGG--ATAAGTCCAAGATCCATGATATCGTCCTGGTTGGTGGCTCCACAAGA 19747 Query 350213 ATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGATC 350271 ||||| ||| | || || | | || ||||||||||||| ||||| | ||| | Sbjct 19746 ATTCCCAAAATCCAGAAGCTCTTGCAGGACTTTTTTAATGGCAGAGAACTGAACAAGAGC 19687 Query 350272 AATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGCATCTATTTTATCTGG 350331 || || |||||||||||||| || || ||||| || || ||||| |||| | ||| Sbjct 19686 -ATCAACCCAGATGAAGCTGTGGCCTACGGTGCAGCAGTCCAGGCTGCTATCCT-CATGG 19629 Query 350332 AAATAAGAGTTCTAAAA---TTGATGATCTATTACTACTAGATGTAACTCCACTTTCGCT 350388 | | | ||| ||| | | ||||| | || || || || |||| || || || Sbjct 19628 --GTGACACTTCAGAAAACGTCCAAGATCTGCTGCTGCTGGACGTGGCTCCCCTGTCTCT 19571 Query 350389 TGGATTAGAAACTTCTGGTGAAGTAATGACTGTTCTTATTCCTAGAAATAGTACTGTACC 350448 || | || ||| | |||| ||| ||||| ||| || |||||| || | || Sbjct 19570 GGGCATTGAGACTGCAGGTGGAGTTATGACGCCTCTAATCAAACGAAATACCACCATCCC 19511 Query 350449 TACAAAAAAGTCCCAAACTTTTTCTACATTTGCAGATAATCAGCCAGCGGTAACAATTCA 350508 | || || |||| | || || |||| | | ||||| ||||| | || ||||| Sbjct 19510 CAACAAGCAGACCCAGATCTTCTCCACATATTCGGATAACCAGCCTGGTGTGCTGATTCA 19451 Query 350509 AGTATTTGAAGGTGAACGTGCTCGCACTAAAGATAATAATAAACTTGGAGAATTTACCCT 350568 || | ||| ||||| | || || || || || || || ||| | ||| || Sbjct 19450 GGTGTATGAGGGTGAGAGAGCCATGACCAAGGACAACAACCTCCTGGGAAAGTTTGAGCT 19391 Query 350569 AAGTGAAATTCCACCAATGCCTAGAGGAGTTCCTCAGATTGAAGTCTCTTTCGATATTGA 350628 | | || || || || |||| || || ||| | || || ||||||| || || Sbjct 19390 CACAGGTATCCCTCCTGCTCCCCGAGGTGTACCACAGGTGGAGGTAACTTTCGACATCGA 19331 Query 350629 TTCAAATGGTATTTTAAATGTTACCGCAGTTGAAAAA 350665 | | ||||| ||| | ||||| | || || || ||| Sbjct 19330 TGCCAATGGCATTCTGAATGTGTCTGCTGTCGACAAA 19294 Score = 145 bits (160), Expect = 2e-29 Identities = 574/886 (65%), Gaps = 28/886 (3%) Strand=Plus/Plus Query 182919 ACATTTAAAATACCATTAGAGTCAACATCAAATGATACTTCAATCTGTGGAACACCTCGT 182978 ||||| | ||| ||||| | || | || || | ||| || | |||||| |||||||| Sbjct 19310 ACATTCAGAATGCCATTGGCATCGATGTCGAAAGTTACCTCCACCTGTGGTACACCTCGG 19369 Query 182979 GGCATTGGTGGAATTCCAGTTAAAGTAAATTCACCTAATTTATTATTATCTTTAGTTCTT 183038 || || || || || || | ||| | || | || || || || || | Sbjct 19370 GGAGCAGGAGGGATACCTGTGAGCTCAAACTTTCCCAGGAGGTTGTTGTCCTTGGTCATG 19429 Query 183039 GCTCTCTCGCCTTCATATACTTGAATAGTAACTGCTGGCTGATTATCACTATAAGTAGAA 183098 |||||||| || ||||| || ||||| || | ||||| ||||| ||| || || Sbjct 19430 GCTCTCTCACCCTCATACACCTGAATCAGCACACCAGGCTGGTTATCCGAATATGTGGAG 19489 Query 183099 AAAACTTGCTTTTTATTAATAGGAATAGTTGAATTTCGCGGAACAATTACAG---TCATT 183155 || | || | | || | || || || | |||||| | ||| || |||| Sbjct 19490 AAGATCTGGGTCTGCTTGTTGGGGATGGTGGTATTTCGTTTGA---TTAGAGGCGTCATA 19546 Query 183156 ACTTCTCTGGCAGTTTCTAATCCTAATGATAATGGTGCTACATCTAGTAATAATAAATCT 183215 ||| | | ||||| || | || | || | || || || || || | | | |||| Sbjct 19547 ACTCCACCTGCAGTCTCAATGCCCAGAGACAGGGGAGCCACGTCCAGCAGCAGCAGATCT 19606 Query 183216 --GATGTTTTATCTGATTTAATATCAC---TTAAAATTGCAGCTTGAACAGCTGCACCAT 183270 || ||||| |||| | | |||| | | || ||||| || || |||||||| | Sbjct 19607 TGGACGTTTT--CTGA---AGTGTCACCCATGAGGATAGCAGCCTGGACTGCTGCACCGT 19661 Query 183271 ATGCAACAGCTTCATCTGGGTTAATTGAACGAGAT-AATTCTTTGCCATTAAAAAA-TTC 183328 | || ||||||||||||||||| | || | | | | |||| ||||||||||||| | | Sbjct 19662 AGGCCACAGCTTCATCTGGGTTGA-TGCTCTTGTTCAGTTCTCTGCCATTAAAAAAGTCC 19720 Query 183329 TGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAATACTACTTCATC 183388 || ||| | | || ||||| |||||||| || || ||||| || | || | |||| Sbjct 19721 TGCAAG-AGCTTCTGGATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACGATATCATG 19779 Query 183389 GATATT--ACTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAGGGTCCATAGTT 183446 ||| || |||| | | | ||| | ||||| | | || ||||| || |||| ||| Sbjct 19780 GATCTTGGACTTAT-CCAGCTTG-GCATCTTGCAGGGCCTTCTCAACTGGTTCCAGTGTT 19837 Query 183447 TTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAGATGaaaaaaaG 183506 ||| || | || |||||| || || | ||| || || | |||| | ||| Sbjct 19838 CCTCTGAAGAGCTCAGAGTTTAACTCCTCAAAGCGTGCCCTTGTGATGGATGTGTAGAAG 19897 Query 183507 TCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATGATGATAATGTT 183566 ||||| || | | | | || || || ||||| | || || || || | || Sbjct 19898 TCAATGCCCTCAAACAGAGAGTCGATCTCAATGCTAGCCTGGGTGCTGGAGGACAGGGTC 19957 Query 183567 CTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGATCTTGGATTATCTGTAATA 183626 || || |||| ||||| ||||| | |||| | | || ||| ||| | | || Sbjct 19958 CTCTTCGCTCTCTCACAAGCTGTACGCAGTCTCCTCACTGCTCTCTTATTTTGGCTGATG 20017 Query 183627 TCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAAT-GTTGAAGTAATCTTG-TATCAA 183684 || | || ||||||||||||||||| | ||| | ||||| ||| | | |||| Sbjct 20018 TCCTTCTTGTGTTTTCTTTTAAATTCCTCTACAAAGTGGTTGA--CCATCCGGTTGTCAA 20075 Query 183685 AATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAATATTCCGTCTT 183744 | || || ||||| | ||||| || || || || | ||| || ||||| || ||||| | Sbjct 20076 AGTCCTCCCCACCAAGGTGTGTGTCTCCTGCGGTGGATTTCACCTCAAAGATGCCGTCCT 20135 Query 183745 CAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 |||| | | ||| || || ||||| || || ||||| | |||||| Sbjct 20136 CAATGGTCAGAATGGACACGTCAAAGGTGCCTCCACCGAGATCAAA 20181 >seq4434 Length=55202 Score = 149 bits (164), Expect = 2e-30 Identities = 715/1127 (63%), Gaps = 21/1127 (2%) Strand=Plus/Minus Query 349199 GCTATAGGAATCGATTTAGGTACTACTTATTCTTGTGTTGCTGTTTGGCAAAATGATCGT 349258 || || || ||||| | || || || || || ||||| | |||| || ||| Sbjct 2889 GCGATCGGCATCGACCTGGGCACCACCTACTCCTGTGTGGGGGTTTTCCAGCATGGAAAA 2830 Query 349259 GTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTTGCATTTACC 349318 |||||||| || || || || || || ||||| || || || || || || || || Sbjct 2829 GTAGAAATCATCGCCAACGACCAGGGCAACAGGACCACCCCCAGCTATGTGGCGTTCACT 2770 Query 349319 GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTGCTGCTAATCCAAAAAAT 349378 || || ||| | | ||||| || | || || || || | ||| || || | || Sbjct 2769 GACACAGAGAGGCTCATTGGGGACGCAGCCAAGAACCAGGTGGCTTTGAACCCCAGCAAC 2710 Query 349379 ACGGTTTTTGATGCTAAGCGACTTATTGGTAGAAGTTTTTCTGACAAATCTACA----CA 349434 || || ||||| || ||| |||| ||||| |||| |||| ||| | || Sbjct 2709 ACTGTGTTTGACGCCAAGAGACTGATTGGAAGAAAG----CTGAATGATCCAGTGGTGCA 2654 Query 349435 ATCTGATCTAAAACATTTTCCTTTTACTGTTGTTCCAAAAGACGGTGATAAACCAATTAT 349494 |||| | || || | || || | || || | || || | || || | || Sbjct 2653 GGCTGACATGAAGCACTGGCCCTTCAAGGTGGTCGGA---GATGGAGGGAAGCCCAAAAT 2597 Query 349495 TGAGGTTGAATATAAAGGTGA--ACAAAAACAATTTTTACCC-GAAGAAATTTCATCAAT 349551 | |||| ||||| ||||| || |||||| | || ||||| ||||| ||||| || || Sbjct 2596 TCAGGTGGAATACAAAGGGGAGGACAAAACC---TTCTACCCTGAAGAGATTTCCTCCAT 2540 Query 349552 GGTTTTAGTTAAAATGAAGGAAATTGCTGAAGCATATTTAGGTGAAACAGTAACTGATGC 349611 ||| | || |||||||| |||||||| || || | || | | || | | || Sbjct 2539 GGTCCTGACGAAGATGAAGGAGATTGCTGAGGCCTACCTCGGCCACAAGGTGTCCAACGC 2480 Query 349612 TGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATGCTGG 349671 || || || || || || || || || || ||||||| || || ||||| || || Sbjct 2479 GGTCATCACAGTCCCGGCGTACTTCAACGACTCCCAGCGACAGGCGACTAAAGACGCAGG 2420 Query 349672 CAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAATTGC 349731 | ||| | || | ||||| || || || || || || || || || || || || || Sbjct 2419 CGTCATCTCAGGACTGAATGTCCTGAGGATCATCAACGAGCCGACGGCGGCCGCCATCGC 2360 Query 349732 ATATGGGCTTGATAAAATGA-GTGACCAAGaaaaaaaTATTCTTATTTTTGATTTAGGTG 349790 || || || || ||| | | || | | ||| || | || || ||||| || || | Sbjct 2359 GTACGGTCTGGACAAAGTCAAGTCAGGA-GAACGTAACGTCCTGATCTTTGACTTGGGCG 2301 Query 349791 GTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGGGAATTTTTGAAGTTAAAGCAA 349850 | || || || || || || | || || ||||||| || || ||||| || ||||| | Sbjct 2300 GAGGCACCTTCGACGTGTCCATCCTGACCATTGAAGACGGCATCTTTGAGGTCAAAGCCA 2241 Query 349851 CTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATAATCGTCTCGTTTCGCATTTTG 349910 | ||||| || || || || ||||||||||| ||||| || || | || || || Sbjct 2240 CAGCTGGAGACACTCACCTGGGTGGAGAAGACTTTGACAACCGCATGGTGAACCACTTCA 2181 Query 349911 TTAAAGAATTTAAGCGTCAAGCTAAAATTGATATTGGAGATAATCCTAGAGCAATGCGTC 349970 | || || ||| | || || | || || | | || ||||| || | Sbjct 2180 CGGAGGAGTTCAAGAGGAAACACAAGAAGGACATCAGCCAGAACAAGAGAGCCTTGAGGA 2121 Query 349971 GCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTATCATCTACTACCCAAACCTCTA 350030 | || | || || ||||| | || ||| | || | || || | |||| || | Sbjct 2120 GGCTGCGCACAGCTTGTGAGAGGGCCAAGAGAACCCTGTCCTCCAGCTCCCAGGCCAGCA 2061 Query 350031 TTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTTTCATCTATTACACGTGCTCGGT 350090 |||| ||||||||||| ||| |||| || |||| | || || || | ||||| | Sbjct 2060 TTGAGATTGATTCTCTGTTTGAGGGCATCGACTTCTACACCTCCATCACCAGGGCTCGCT 2001 Query 350091 TTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATGGATCCTGTGGAAAAAGTATTAA 350150 |||| || | || || || || || | |||| | || || ||||| |||| | | Sbjct 2000 TTGAGGAGCTGTGCTCCGACCTGTTCAGGGGAACATTAGAGCCGGTGGAGAAAGCCCTGA 1941 Query 350151 AAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTAGTTTTAGTTGGTGGTTCTACAC 350210 || || |||||| ||| ||||| | || | || | || || || || || | Sbjct 1940 GGGACGCCAAAATGGACAAGGCGCAGATCCACGACATCGTCCTGGTCGGAGGCTCCACCC 1881 Query 350211 GTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTTAATGGCAAAGAAC-CTTCTAGA 350269 | || || ||| | || | | || || || || || |||| || | | ||| Sbjct 1880 GGATCCCCAAAATCCAGAAACTCCTGCAGGATTTCTTCAACGGCAGGGAGCTGAACAAGA 1821 Query 350270 TCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTGCTGTTCAGGC 350316 | || || |||||||| || || || || |||||||| || ||||| Sbjct 1820 GC-ATCAACCCAGATGAGGCGGTGGCTTACGGTGCTGCCGTCCAGGC 1775 >seq3162 Length=48913 Score = 145 bits (160), Expect = 2e-29 Identities = 160/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || || || | || || |||||| Sbjct 2571 AGCACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2512 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| ||||| ||||| || ||||| || || || |||||| Sbjct 2511 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGAGGGATGCCCTCCTTATCC 2452 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || ||||| ||||| ||||| | ||| || ||||| || | || | ||| Sbjct 2451 TGGATCTTGGCTTTGACATTTTCAATGGTGTCACTGGGCTCAACCTCCAAAGTGATGGTC 2392 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCATT 140738 || || || || || || ||||||||||||||| Sbjct 2391 TTGCCAGTCAGGGTCTTCACAAAAATCTGCATT 2359 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || || ||||| || || || || || || | || || |||||| Sbjct 2799 AGGACCAGGTGGAGTGTGGATTCTTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2740 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct 2739 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 2680 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || ||||| ||||| | ||| || ||||| || || || | ||| Sbjct 2679 TGGATCTTGGCCTTCACATTCTCAATAGTGTCACTGGGCTCAACCTCCAGGGTGATGGTC 2620 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || |||||||||||||| Sbjct 2619 TTGCCAGTCAGGGTCTTCACAAAAATCTGCAT 2588 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || || || || || || ||||| || || || || || || || | || || |||||| Sbjct 3027 AGGACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCCATCT 2968 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| ||||| ||||| || ||||| || ||||| |||||| Sbjct 2967 TCCAGCTGCTTGCCAGCAAAGATCAGACGCTGCTGGTCTGGAGGGATGCCTTCCTTATCC 2908 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || || || || || || || ||||| | ||| ||| ||||| || || || | ||| Sbjct 2907 TGGATCTTGGCCTTCACGTTCTCAATAGTGTCACTTGGCTCAACCTCCAGGGTGATGGTC 2848 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || || |||||||| Sbjct 2847 TTGCCAGTCAGGGTCTTCACGAAGATCTGCAT 2816 >seq6074 Length=24291 Score = 140 bits (154), Expect = 1e-27 Identities = 158/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || ||||| | || || |||||| Sbjct 4581 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 4640 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 4641 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 4700 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || |||||||| || ||||| ||||| | ||| || || || || || || | ||| Sbjct 4701 TGGATTTTAGCCTTGACATTCTCAATGGTGTCACTGGGCTCGACCTCCAGGGTGATGGTC 4760 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || ||||| |||||||| Sbjct 4761 TTGCCAGTGAGGGTCTTGACAAAGATCTGCAT 4792 Score = 131 bits (144), Expect = 5e-25 Identities = 156/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || ||||| | || || |||||| Sbjct 3746 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 3805 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 3806 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 3865 Query 140646 TGAATTTTAGCTTTTACATTATCAATCGAATCAGATGGTTCAACTTCAAGTGTAACTGTC 140705 || |||||||| || ||||| ||||| | || || || || || || || | ||| Sbjct 3866 TGGATTTTAGCCTTGACATTCTCAATGGTGTCGCTGGGCTCGACCTCCAGGGTGATGGTC 3925 Query 140706 TTTCCGGTTAGTGTTTTTACAAAAATCTGCAT 140737 || || || || || || || || |||||||| Sbjct 3926 TTACCAGTGAGGGTCTTGACGAAGATCTGCAT 3957 Score = 91.5 bits (100), Expect = 4e-13 Identities = 95/125 (76%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 140526 AGAACAAGATGAAGAGTAGACTCTTTTTGAATATTATAATCAGATAATGTTCGCCCATCT 140585 || |||||||| || || ||||| || || || || || ||||| | || || |||||| Sbjct 3974 AGGACAAGATGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCT 4033 Query 140586 TCAAGTTGTTTTCCAGCAAAGATTAGACGTTGCTGATCAGGAGGAATTCCTTCTTTATCC 140645 || || || || ||||||||||| || | ||||| || || ||||| ||||| || ||| Sbjct 4034 TCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCTGGGGGAATGCCTTCCTTGTCC 4093 Query 140646 TGAAT 140650 || || Sbjct 4094 TGGAT 4098 >seq2860 Length=62146 Score = 114 bits (126), Expect = 4e-20 Identities = 110/141 (78%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 349608 ATGCTGTTATTACTGTACCAGCCTATTTTAATGATGCCCAGCGTTCTGCAACAAAAGATG 349667 |||| ||||| ||||| || || || || ||||| |||||||| || || ||||||| Sbjct 60829 ATGCAGTTATCACTGTTCCTGCTTACTTCAATGACTCCCAGCGTCAAGCCACCAAAGATG 60770 Query 349668 CTGGCAGCATTGCGGGGTTAAATGTTCTAAGAATGATTAATGAACCCACTGCTGCAGCAA 349727 |||| | |||||| ||| | ||||| || | || || ||||| |||||||||||||| | Sbjct 60769 CTGGAACCATTGCTGGGCTTAATGTGCTGCGCATCATCAATGAGCCCACTGCTGCAGCCA 60710 Query 349728 TTGCATATGGGCTTGATAAAA 349748 |||| ||||| || || |||| Sbjct 60709 TTGCTTATGGCCTGGACAAAA 60689 >seq290 Length=227343 Score = 105 bits (116), Expect = 2e-17 Identities = 350/539 (65%), Gaps = 4/539 (1%) Strand=Plus/Plus Query 349770 TTCTTATTTTTGATTTAGGTGGTGGTACTTTTGATGTATCACTACTAACACTTGAAGAGG 349829 |||| || |||||| | |||||||| || || ||||| || | | || | || || | Sbjct 45785 TTCTCATCTTTGATCTTGGTGGTGGCACCTTCGATGTTTCCATCTTGACCATCGAGGATG 45844 Query 349830 GAATTTTTGAAGTTAAAGCAACTGCTGGTGATACACATCTTGGTGGAGAAGATTTTGATA 349889 | || ||||| || || | |||||||| ||||| ||||||||||| |||||||| || | Sbjct 45845 GTATCTTTGAGGTCAAGTCCACTGCTGGAGATACTCATCTTGGTGGGGAAGATTTCGACA 45904 Query 349890 ATCGTCTCGTTTCGCATTTTGTTAAAGAATTTAAGCGTCAAG-CTAAAATTGATATTGGA 349948 | || | || || ||| || ||| || || || |||| || | || || | Sbjct 45905 ACCGCATGGTCAACCACTTTATTGCAGAGTTCAAACG-CAAGTACAAGAAGGACATCAGT 45963 Query 349949 GATAATCCTAGAGCAATGCGTCGCCTAAGAACTGCGTGTGAACGTGCTAAGCGTTCCTTA 350008 || || ||||| | ||||| || | || || ||||| | || ||||| || | Sbjct 45964 GACAACAAGAGAGCTGTCCGTCGTCTGCGCACCGCATGTGAGAGGGCAAAGCGCACCCTG 46023 Query 350009 TCATCTACTACCCAAACCTCTATTGAAATTGATTCTCTTGCTGATGGCAAAGATTTCTTT 350068 || || | ||||| || |||||||| || ||||| || || || |||| Sbjct 46024 TCTTCCAGCACCCAGGCCAGCATTGAAATCGACTCTCTGTACGAGGGAGTTGACTTCTAC 46083 Query 350069 TCATCTATTACACGTGCTCGGTTTGAAGAATTATGTATGGATCTTTTTAGAGCAACAATG 350128 | || || || | ||||| ||||| || | || || || | | || || Sbjct 46084 ACCTCAATCACCAGGGCTCGCTTTGAGGAGCTCAACGCTGACCTCTTCCGTGGCACCTTG 46143 Query 350129 GATCCTGTGGAAAAAGTATTAAAAGATGCAAAAATGTCCAAAAATCAGATTGATGAAGTA 350188 || || ||||| || | | || || || ||| ||| |||||| | || | Sbjct 46144 GACCCCGTGGAGAAGTCACTCCGTGACGCCAAGATGGATAAAGGGCAGATTCACGACATC 46203 Query 350189 GTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTATCTGAGTTTTTT 350248 || || || ||||| || || ||||| || || | || || | || || || || Sbjct 46204 GTGTTGGTCGGTGGCTCCACCCGTATCCCCAAGATCCAGAAGCTGCTCCAGGATTTCTTC 46263 Query 350249 AATGGCAAAGAAC-CTTCTAGATCAATTAATCCAGATGAAGCTGTTGCATATGGTGCTG 350306 ||||| || || | | | ||| | || ||||||||||||||||| || || || |||| Sbjct 46264 AATGGAAAGGAGCTCAACAAGAGC-ATCAATCCAGATGAAGCTGTGGCCTACGGAGCTG 46321 >seq1043 Length=203059 Score = 100 bits (110), Expect = 9e-16 Identities = 349/537 (65%), Gaps = 16/537 (3%) Strand=Plus/Plus Query 183262 CTGCACCATATGCAACAGCTTCATCTGGGTTAAT----TGAACGAGATAATTCTTTGCCA 183317 |||||||||| || || ||||| || |||||||| | | ||| | ||| ||| Sbjct 13163 CTGCACCATAGGCCACTGCTTCGTCAGGGTTAATGCTCTTATTGAGCTCCTTC----CCA 13218 Query 183318 TT-AAAAAATTCTGAAAGCATTTGTTGAATTTTTGGAATTCTAGTTGAACCACCGACTAA 183376 || ||||||| ||| || || | || || || ||||| | ||| ||||| || || || Sbjct 13219 TTGAAAAAATCCTGCAA-CAGCTTCTGGATCTTGGGAATACGAGTGGAACCTCCCACCAA 13277 Query 183377 TACTACTTCATCGATATTA-CTTTTACTAATTTGTGAATCTTTTAAAACTTTTTCAACAG 183435 ||| | || | || | | || | | ||| | ||| || | | ||||| |||| Sbjct 13278 TACAATGTCGTGGACTTGGGCCTTGTCCATCTTG-GCATCACGTAGAGCCTTTTCCACAG 13336 Query 183436 GGTCCATAGTTTTTCTAAATAAATCTATACATAACTCTTCTAATCTTGCTCTAGTTAAAG 183495 | |||| ||| || || | ||| | | ||| || || | || || || | | Sbjct 13337 GCTCCAGGGTTCCTCGGAACAGGTCTGCATTCAGCTCCTCAAACCGGGCCCTGGTGATCG 13396 Query 183496 ATGaaaaaaaGTCAATACCATTATATAAGGAATCAATTTCAATCGATGTTTGTGTAGATG 183555 | | | ||||| | || | ||| | ||||| |||||||| | || || | Sbjct 13397 AGGTGTAGAAGTCGACTCCCTCATACAGAGAATCGATTTCAATGCTGGCCTGAGTGCTGG 13456 Query 183556 ATGATAATGTTCTTTTAGCTCGTTCACATGCTGTTCTTAGTCGACGTAATGA--TCTTGG 183613 | || | || | || || | || |||||||| | || ||||| | | ||||| Sbjct 13457 ACGACAGAGTGCGCTTGGCCCTCTCGCATGCTGTACGCAGACGACGCACCGCCCTCTTG- 13515 Query 183614 ATTATCTGTAATATCTTGTTTATGTTTTCTTTTAAATTCAGTAATAAAATGTTGAAGTAA 183673 || || | || |||| || | || | ||| || || | || || || | | | Sbjct 13516 -TTGTCACTGATGTCTTTCTTGTACTTGCGTTTGAACTCGGAGATGAAGTGGTTGACCAT 13574 Query 183674 TCTTGTATCAAAATCTTCACCACCTAAATGTGTATCGCCAGCAGTAGCTTTAACTTCAAA 183733 | ||||||| ||||| ||||| || ||||| ||||| || || | || || ||||| Sbjct 13575 GCGGTTATCAAAGTCTTCTCCACCCAAGTGTGTGTCGCCTGCTGTGGACTTGACCTCAAA 13634 Query 183734 TATTCCGTCTTCAATATTTAAAATTGATACATCAAATGTACCACCACCCAAATCAAA 183790 || || ||||||||| | || || || ||||||||||| |||||||||| ||||| Sbjct 13635 GATGCCATCTTCAATAGTCAAGATGGAGACATCAAATGTGCCACCACCCAGGTCAAA 13691 >seq76 Length=279335 Score = 100 bits (110), Expect = 9e-16 Identities = 106/140 (76%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 350177 ATTGATGAAGTAGTTTTAGTTGGTGGTTCTACACGTATTCCAAAAGTTCAACAGTTACTA 350236 |||||||| | || | |||||||| || || ||||| |||||| | || ||| | | Sbjct 41417 ATTGATGAGATTGTCCTGGTTGGTGGCTCCACCCGTATCCCAAAAATCCAGCAGCTGGTG 41476 Query 350237 TCTGAGTTTTTTAATGGCAAAGAACCTTCTAGATCAATTAATCCAGATGAAGCTGTTGCA 350296 ||||| || ||||||||||| || |||||| || || || ||||| ||||| ||| Sbjct 41477 AAGGAGTTCTTCAATGGCAAAGAGCCCTCTAGAGGCATCAACCCTGATGAGGCTGTGGCA 41536 Query 350297 TATGGTGCTGCTGTTCAGGC 350316 ||||| |||||||| ||||| Sbjct 41537 TATGGAGCTGCTGTGCAGGC 41556 Score = 86.0 bits (94), Expect = 2e-11 Identities = 118/162 (73%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 349250 AATGATCGTGTAGAAATAATTGCAAATGATCAAGGTAACAGAACAACGCCATCATACGTT 349309 |||| ||||| || || || || ||||| || |||||| | | || |||||||| || Sbjct 40081 AATGGCCGTGTGGAGATCATCGCCAATGACCAGGGTAACCGCATCACCCCATCATATGTG 40140 Query 349310 GCATTTACC---GAAACTGAGCGTATGATTGGTGATTCTGCAAAAAATCAAGCTG-CTGC 349365 || || ||| || ||||||| ||||||||||| |||| || || | || || | | Sbjct 40141 GCCTTCACCAGTGAGGGTGAGCGTCTGATTGGTGATGCTGCCAAGAA-CCAGTTGACCTC 40199 Query 349366 TAATCCAAAAAATACGGTTTTTGATGCTAAGCGACTTATTGG 349407 ||| ||| | || || || |||||||| ||| || | ||||| Sbjct 40200 TAACCCAGAGAACACTGTCTTTGATGCCAAGAGATTGATTGG 40241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1514901100442994