Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq3467 98.7 1e-15 >seq3467 Length=3272559 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || ||||| ||||| || ||||||||||| || ||||| ||||||||||||| Sbjct 2317872 GGTCCTTGATGTACGTGTCGATCAGCAGGCTGTACATCTCTGAGTGGATGTTCTCCATGG 2317813 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 | ||||| || ||||| || || ||||| |||| || || |||||| Sbjct 2317812 CGATCTGGAAACCGTAGAAACACCGGGCCTCCGTTACCTGCACTTCC 2317766 Score = 98.7 bits (108), Expect = 1e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 17226 GGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGG 17285 |||| | || ||||| ||||| || ||||||||||| || ||||| ||||||||||||| Sbjct 2329078 GGTCCTTGATGTACGTGTCGATCAGCAGGCTGTACATCTCTGAGTGGATGTTCTCCATGG 2329137 Query 17286 CTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCC 17332 | ||||| || ||||| || || ||||| |||| || || |||||| Sbjct 2329138 CGATCTGGAAACCGTAGAAACACCGGGCCTCCGTTACCTGCACTTCC 2329184 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| ||||||||| |||| |||| Sbjct 2318294 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 2318235 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| || || ||||||||||| || || ||||| || ||||| || | ||||| | Sbjct 2318234 TCAGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGG 2318175 Query 17106 C 17106 | Sbjct 2318174 C 2318174 Score = 96.9 bits (106), Expect = 4e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 16986 CCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCT 17045 |||||||||||||||| || ||||| || || |||| ||||||||| |||| |||| Sbjct 2328656 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 2328715 Query 17046 TTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACG 17105 | | ||| || || ||||||||||| || || ||||| || ||||| || | ||||| | Sbjct 2328716 TCAGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGG 2328775 Query 17106 C 17106 | Sbjct 2328776 C 2328776 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517522601567400