Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq3011 118 8e-22 >seq3011 Length=8691009 Score = 118 bits (130), Expect = 8e-22 Identities = 127/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 101759 TGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCC 101818 || ||||||||| | || | ||| |||||||| || ||||| || ||||||||||| ||| Sbjct 8387932 TGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGCACTCCTAATCCC 8387873 Query 101819 ATATCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGA 101878 ||||||||||| | || ||||| ||||| || |||| || || || || || || || Sbjct 8387872 ATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCACACGTAGAACTGG 8387813 Query 101879 CTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACA 101926 | | | | || || || |||| | |||| |||||| ||||| |||| Sbjct 8387812 CAGAGTGCGTGGCAGGGGGGCAGCGCCATCCTAGGAAGGTCTGCAACA 8387765 Score = 89.7 bits (98), Expect = 4e-13 Identities = 106/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Minus Query 102038 TATTCTGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCT 102097 || ||||| || || ||||||||||| || ||||||||||| || || || || || ||| Sbjct 8387121 TACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTCACCCTCTTCT 8387062 Query 102098 CTGTCATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGC 102157 |||||| || ||||| || || | ||| | ||| || || |||||||| || | | Sbjct 8387061 CTGTCAGTGAACCCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATCCCAGATCTTC 8387002 Query 102158 ACGCCAGCTGCTGATAGCTCTTTG 102181 || || | |||| ||||| ||| Sbjct 8387001 ACTCCTTTTTCTGACAGCTCCTTG 8386978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361235548227305