Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_002593.1
Length=100999
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 104 2e-17
>seq3522
Length=4083170
Score = 104 bits (114), Expect = 2e-17
Identities = 140/193 (73%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || ||| | || |||| ||||||||| || ||
Sbjct 3190499 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 3190440
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| |||| ||||||||| ||| | || |||||||| || ||||| ||| | |
Sbjct 3190439 ATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC--CTGGATTTTGGCCTTCACGT 3190382
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | ||| | | || || || | |||||||| ||||| ||||| |||||||
Sbjct 3190381 TCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGCGTTTTCA 3190322
Query 34377 CAAAGATCTGCAT 34389
|||||||||||||
Sbjct 3190321 CAAAGATCTGCAT 3190309
Score = 102 bits (112), Expect = 5e-17
Identities = 137/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || ||| | || |||| ||||||||| || ||
Sbjct 3191639 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 3191580
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318
|| |||| |||||||||| ||| | || |||||| || ||||| ||| | |
Sbjct 3191579 ATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTC 3191520
Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378
| || | || | | || || |||| |||||||| ||||| ||||| || |||||
Sbjct 3191519 TCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACG 3191460
Query 34379 AAGATCTGCAT 34389
|||||||||||
Sbjct 3191459 AAGATCTGCAT 3191449
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || ||| | || |||| ||||||||| || ||
Sbjct 3190955 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 3190896
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| |||| |||||||||| ||| | || |||||| || || ||||| ||| | |
Sbjct 3190895 ATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC--CTGGATTTTGGCCTTGACGT 3190838
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | || | | || || |||| |||||||| ||||| ||||| || ||||
Sbjct 3190837 TCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCA 3190778
Query 34377 CAAAGATCTGCAT 34389
| |||||||||||
Sbjct 3190777 CGAAGATCTGCAT 3190765
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || ||| | || |||| ||||||||| || ||
Sbjct 3191183 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 3191124
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| |||| |||||||||| ||| | || |||||| || || ||||| ||| | |
Sbjct 3191123 ATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC--CTGGATTTTGGCCTTGACGT 3191066
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | || | | || || |||| |||||||| ||||| ||||| || ||||
Sbjct 3191065 TCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCA 3191006
Query 34377 CAAAGATCTGCAT 34389
| |||||||||||
Sbjct 3191005 CGAAGATCTGCAT 3190993
Score = 100 bits (110), Expect = 2e-16
Identities = 139/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || ||| | || |||| ||||||||| || ||
Sbjct 3219821 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAG 3219762
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| |||| |||||||||| ||| | || |||||| || || ||||| ||| | ||
Sbjct 3219761 ATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC--CTGGATTTTGGCCTTGACAT 3219704
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | || | | || || || | |||||||| || || || || |||||||
Sbjct 3219703 TCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCA 3219644
Query 34377 CAAAGATCTGCAT 34389
|||||||||||||
Sbjct 3219643 CAAAGATCTGCAT 3219631
Score = 95.1 bits (104), Expect = 8e-15
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || ||| | || || | ||||||||| || ||
Sbjct 3190727 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAG 3190668
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| |||| |||||||||| ||| | || |||||||| || ||||| ||| | |
Sbjct 3190667 ATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTC--CTGGATTTTGGCCTTCACGT 3190610
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | || | | || || |||| |||||||| ||||| ||||| || ||||
Sbjct 3190609 TTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCA 3190550
Query 34377 CAAAGATCTGCAT 34389
| |||||||||||
Sbjct 3190549 CGAAGATCTGCAT 3190537
Score = 95.1 bits (104), Expect = 8e-15
Identities = 138/193 (72%), Gaps = 4/193 (2%)
Strand=Plus/Minus
Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258
|| ||||| ||||||||||| || || ||| | || || | ||||||||| || ||
Sbjct 3191411 TCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAG 3191352
Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTG--CTTTAGAT 34316
|| |||| |||||||||| ||| | || |||||||| || ||||| ||| | |
Sbjct 3191351 ATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTC--CTGGATTTTGGCCTTCACGT 3191294
Query 34317 CGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCA 34376
| || | || | | || || |||| |||||||| ||||| ||||| || ||||
Sbjct 3191293 TTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCA 3191234
Query 34377 CAAAGATCTGCAT 34389
| |||||||||||
Sbjct 3191233 CGAAGATCTGCAT 3191221
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 323058002400800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |