Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_002665.1 Length=108873 Score E Sequences producing significant alignments: (Bits) Value seq3267 282 3e-71 >seq3267 Length=6272959 Score = 282 bits (312), Expect = 3e-71 Identities = 612/904 (68%), Gaps = 14/904 (2%) Strand=Plus/Minus Query 107676 TTCAT-ACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGT 107734 ||||| |||| ||| || ||| | |||||| ||| ||||||||||| ||||| ||||| Sbjct 4712143 TTCATCACAGCTCCT-CTCAGTGAGGAAGAGAAAGATTTCCCCATTGCATACTCCATGGT 4712085 Query 107735 GGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAA 107794 | ||||||| |||||||| | ||||| ||||| || ||||| | ||||| |||||||| Sbjct 4712084 GATCCATGACAAGATTGAGATGTTTGAGCGGCTTCTACGAGCTATTTATGCTCCTCAGAA 4712025 Query 107795 CATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGC 107854 ||| |||||||| |||||||| ||| ||| | | || ||||| |||| || || Sbjct 4712024 CATTTACTGTGTACACGTGGACCAGAAATCCTCTGCAACATTCAAGAAGGCTGTGGCTGC 4711965 Query 107855 CATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGC 107914 ||| ||| ||||| || ||||| || | |||||||| || | ||||| ||||| Sbjct 4711964 GATTGCTTCATGCTTTCCTAATGTGTTTGTAGCCAGTAAATTAGAAAGAGTGGTATATGC 4711905 Query 107915 CTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGT 107974 ||| |||| |||||| || || || ||||| || ||| |||| |||| | | |||| Sbjct 4711904 CTCGTGGTTCAGAGTACAGGCAGATCTGAATTGCATGAAAGATCTGCTAAATA-CTCACA 4711846 Query 107975 GCCA-TGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCG 108033 | | |||| |||| | || || || || ||||||||||||||||| || || || | Sbjct 4711845 TCAACTGGAGGTACCTGCTTAACACCTGTGGGACAGACTTCCCCATCAAAACAAACAGAG 4711786 Query 108034 AGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTT 108093 ||||||| ||| || ||| | | || || | |||||| |||||||| ||||| ||| Sbjct 4711785 AGATGGTGAGGGCACTGAAGCTTCTCAATGGGAGGAACAGCATGGAGTCCGAGGTGACTT 4711726 Query 108094 CTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTA 108153 ||| | ||| ||| ||| ||| | || | | | | | ||| | | | || | | Sbjct 4711725 CTGGCTACAAGAAAGGTCGTTGGCAGTATCACCACAATATCACAAAGAGTGT-TATC--A 4711669 Query 108154 CCAGCAAGATGAAGGACCCT--CCCCCTGAT-AATTTACCCATGTTCACAGGGAATGCCT 108210 || || ||| | | | ||| | || | | ||||||||| |||| ||||||| Sbjct 4711668 ACACAAATGTGAGGAAAAGTGACCCACCAATCAGCATCCCCATGTTCTCAGGAAATGCCT 4711609 Query 108211 ATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGAC 108270 | ||||||| | | |||| ||||| ||||||| | || || | || | Sbjct 4711608 ACTTTGTGGTCACAAGAGCTTTTGTGGAACATGTGATGGAGGACAGAGAGGTTCAGAAGT 4711549 Query 108271 TGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGC 108330 | | || |||| || ||||| || ||||| || || ||| | ||||||||||| ||| Sbjct 4711548 TTCTGGAGTGGGAGAAGGACACATACAGCCCTGATGAGCACTTGTGGGCCACCCTGCAGA 4711489 Query 108331 G--TGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACAT 108388 | ||| | || | ||||| || | || | |||||| |||| |||||||| Sbjct 4711488 GGATGCCCTCTG--TTCCTGGGTCAATGCCCCAAAATGGGAAGTATGACATGTCAGACAT 4711431 Query 108389 GACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGC 108448 | || | || || || |||||| ||| | |||||| | | | ||| || Sbjct 4711430 GCTAGCTTTGGCTCGGGCAGTGAAGTGGTCGTATTCAGCAGGAGATATGAATAAGGGAGC 4711371 Query 108449 GCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGA 108508 || ||| || ||| |||| | | | || || || || | || || || || || Sbjct 4711370 CCCATATTACCCATGCACTGGTGTTTACAGAAGAGCTATTTGTGTGTATGGAGCGGGTGA 4711311 Query 108509 CCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGA 108568 ||| ||| | || | | || ||||| || ||||| |||||||| || ||| || Sbjct 4711310 CCTCCCATGGCTCCTGAAACAACACCACCTGTTTGCAAATAAGTTTGATCCAGAGGTTGA 4711251 Query 108569 TGAT 108572 |||| Sbjct 4711250 TGAT 4711247 Score = 277 bits (306), Expect = 1e-69 Identities = 611/904 (68%), Gaps = 14/904 (2%) Strand=Plus/Minus Query 107676 TTCAT-ACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGT 107734 ||||| |||| ||| || ||| | |||||| ||| ||||||||||| ||||| ||||| Sbjct 4701783 TTCATCACAGCTCCT-CTCAGTGAGGAAGAGAAAGATTTCCCCATTGCATACTCCATGGT 4701725 Query 107735 GGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAA 107794 | ||||||| |||||||| | ||||| ||||| || ||||| || ||||| |||||||| Sbjct 4701724 GATCCATGACAAGATTGAGATGTTTGAGCGGCTTCTACGAGCTGTTTATGCTCCTCAGAA 4701665 Query 107795 CATATACTGTGTCCACGTGGATGTGAAGTCCCCAGAGACTTTCAAAGAGGCGGTCAAGGC 107854 ||| |||||||| |||||||| ||| ||| | | | |||| |||| || || Sbjct 4701664 CATTTACTGTGTACACGTGGACCAGAACTCCTCTGCATCATTCATGAAGGCTGTGGCTGC 4701605 Query 107855 CATTATTTCCTGCTTCCCCAATGTCTTCATGGCCAGTAAGTTGGTCCCGGTGGTTTATGC 107914 ||| ||| ||||| || ||||| || | |||||||| || | ||||| ||||| Sbjct 4701604 GATTGCTTCATGCTTTCCTAATGTGTTTGTAGCCAGTAAATTAGAAAGAGTGGTATATGC 4701545 Query 107915 CTCCTGGTCCAGAGTGCAAGCTGACCTGAACTGTATGGAAGACTTGCTCCAGAGCTCAGT 107974 ||| |||| |||||| || || || ||||| || ||| |||| |||| | | |||| Sbjct 4701544 CTCGTGGTTCAGAGTACAGGCAGATCTGAATTGCATGAAAGATCTGCTAAATA-CTCACA 4701486 Query 107975 GCCA-TGGAAGTACTTACTGAATACATGCGGGACAGACTTCCCCATAAAGACCAATGCCG 108033 | | |||| |||| | || || || || ||||||||||||||||| || || || | Sbjct 4701485 TCAACTGGAGGTACCTGCTTAACACCTGTGGGACAGACTTCCCCATCAAAACAAACAGAG 4701426 Query 108034 AGATGGTCCTGGCCCTCAAGATGTTGAAGGGTAAGAACAGTATGGAGTCTGAGGTACCTT 108093 ||||||| ||| || ||| | | || || | |||||| |||||||| ||||| ||| Sbjct 4701425 AGATGGTGAGGGCACTGAAGCTTCTCAATGGGAGGAACAGCATGGAGTCCGAGGTGACTT 4701366 Query 108094 CTGAGTCCaaaaaaaaTCGCTGGAAATACCGCTATGAGGTGACAGACACACTGTACCCTA 108153 ||| | ||| ||| ||| ||| | || | | | | | ||| | | | || | | Sbjct 4701365 CTGGCTACAAGAAAGGTCGTTGGCAGTATCACCACAATATCACAAAGAGTGT-TATC--A 4701309 Query 108154 CCAGCAAGATGAAGGACCCT--CCCCCTGAT-AATTTACCCATGTTCACAGGGAATGCCT 108210 || || ||| | | | ||| | || | | ||||||||| |||| ||||||| Sbjct 4701308 ACACAAATGTGAGGAAAAGTGACCCACCAATCAGCATCCCCATGTTCTCAGGAAATGCCT 4701249 Query 108211 ATTTTGTGGCCTCTCGAGCCTTTGTCCAACATGTCTTAGACAACCCTAAATCCCAAAGAC 108270 | ||||||| | | |||| ||||| ||||||| | || || | || | Sbjct 4701248 ACTTTGTGGTCACAAGAGCTTTTGTGGAACATGTGATGGAGGACAGAGAGGTTCAGAAGT 4701189 Query 108271 TGGTTGAATGGGTCAAAGACACCTATAGCCCCGACGAACACCTCTGGGCCACCCTTCAGC 108330 | | || |||| || ||||| || ||||| || || ||| | ||||||||||| ||| Sbjct 4701188 TTCTGGAGTGGGAGAAGGACACATACAGCCCTGATGAGCACTTGTGGGCCACCCTGCAGA 4701129 Query 108331 G--TGCTCCGTGGATGCCTGGCTCTGTTCCTAGCCACCCCAAGTATCACATCTCAGACAT 108388 | ||| | || | ||||| || | || | |||||| |||| |||||||| Sbjct 4701128 GGATGCCCTCTG--TTCCTGGGTCAATGCCCCAAAATGGGAAGTATGACATGTCAGACAT 4701071 Query 108389 GACTGCCATCGCCAGGCTCGTCAAGTGGCAGTACCACGAGGGAGATGTCAGCATGGGGGC 108448 | || | || || || |||||| ||| | |||||| | | | ||| || Sbjct 4701070 GCTAGCTTTGGCTCGGGCAGTGAAGTGGTCGTATTCAGCAGGAGATATGAATAAGGGAGC 4701011 Query 108449 GCCTTATGCACCCTGCTCTGGAATCCATCGGAGGGCCATCTGCATTTACGGGGCCGGGGA 108508 || ||| || ||| |||| | | | || || || || | || || || || || Sbjct 4701010 CCCATATTACCCATGCACTGGTGTTTACAGAAGAGCTATTTGTGTGTATGGAGCGGGTGA 4700951 Query 108509 CCTGTACTGGATTCTCCAGAACCATCACCTCTTGGCAAACAAGTTTGACCCGAGGGTGGA 108568 ||| ||| | || | | || ||||| || ||||| |||||||| || ||| || Sbjct 4700950 CCTCCCATGGCTCCTGAAACAACACCACCTGTTTGCAAATAAGTTTGATCCAGAGGTTGA 4700891 Query 108569 TGAT 108572 |||| Sbjct 4700890 TGAT 4700887 Score = 125 bits (138), Expect = 5e-24 Identities = 114/141 (81%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 107676 TTCAT-ACAGTTCCCACTGAGTAAAGAAGAGCTAGACTTCCCCATTGCCTACTCGATGGT 107734 ||||| |||| ||| || | | | |||||| ||| ||||||||||| ||||| ||| | Sbjct 4710500 TTCATCACAGCTCCT-CTCAATGAGGAAGAGAAAGATTTCCCCATTGCATACTCCATGTT 4710442 Query 107735 GGTCCATGAGAAGATTGAAAACTTTGAACGGCTGCTGCGAGCCGTGTATGCCCCTCAGAA 107794 | ||||||| |||||||| | ||||| ||||| || ||||| || ||||| |||||||| Sbjct 4710441 GATCCATGACAAGATTGAGATGTTTGAGCGGCTTCTACGAGCTGTTTATGCTCCTCAGAA 4710382 Query 107795 CATATACTGTGTCCACGTGGA 107815 ||| |||||||| |||||||| Sbjct 4710381 CATTTACTGTGTACACGTGGA 4710361 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 348253710710070