Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_003310.1
Length=196858
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 405 6e-108
seq1157 105 8e-18
>seq3478
Length=3494213
Score = 405 bits (448), Expect = 6e-108
Identities = 1267/1952 (65%), Gaps = 39/1952 (2%)
Strand=Plus/Minus
Query 62325 TTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGGTTA 62384
||||| ||||| |||||||| | ||||| || | || | || || || |||||
Sbjct 2084512 TTCTTCATCTCCTCATTCCACAGGCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTG 2084453
Query 62385 ACTACTTGGAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCC 62444
|| | || || || || || | || | || ||||| || || || || || | ||
Sbjct 2084452 ACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCG 2084393
Query 62445 ACCGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAAT 62504
| ||||| || || |||| || || || || || || || ||||| || | || ||
Sbjct 2084392 ATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAGCAGC 2084333
Query 62505 AAACTATTTCTAAGACCGTATGTTCTGATTTTATCTTTTAGATGTTCCCAATTCCAAAGA 62564
| || || || | || | | | ||| || || || || | | ||| | ||| ||
Sbjct 2084332 AGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGG 2084273
Query 62565 TCCGACGG-------TACAACANNNNNNNNNNNATATTGTAGAATACCGTTACTGGCGTA 62617
|||| || | | ||| || || ||||| || ||||| |
Sbjct 2084272 TCCGTTGGCGTCTTCTCCCACATGTCG-------TACTGGAGAATGCCCTTACTCACCGG 2084220
Query 62618 CGATCCTACATATGTATCATATGGTCCTTCCTTCTCAGCTAGTTTACAACTCGCCTCTAA 62677
||| ||| | || || ||||| | || || | || || | || ||||| || ||
Sbjct 2084219 CGAGCCTTCGTACGTCTCATAGGTGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCTTCCAA 2084160
Query 62678 TGCACCGTAATAAATGGTTTCAAAGATCTTCTTATTTAGATCTTGTGCTTCCGGGCTATC 62737
|| | ||||| || || |||||||||| | || || ||| || || ||||| ||
Sbjct 2084159 AGCGGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTC 2084100
Query 62738 AAATGGATAATTTAAGAGAATAAACGCGTCCGCTAATCCTTGAACACCAATACCGATAGG 62797
||| |||||| | || || || || || || ||||| || || || || || || ||
Sbjct 2084099 AAAGGGATAACGCATAAGGATGAAAGCATCAGCCAATCCCTGGACCCCGATTCCTATCGG 2084040
Query 62798 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62857
|| || | | | || || | |||||| | || || || || || || ||||
Sbjct 2084039 CCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAAC 2083980
Query 62858 TTTATTGAGATTTCTGACAATTACTTTGACCAC--ATCCTTCAGTTTGAGAAAATCAAAT 62915
|| || | || ||||||||||||||| ||| || | || ||| ||| ||| |
Sbjct 2083979 CTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGATGC--CAATTTTTTAAAGTCATAA 2083922
Query 62916 ---CGCCCATCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACACACGGCTACC 62972
||| || | || ||||||| | || ||||| |||||||| || || || |||
Sbjct 2083921 GTCCGCTCAGGGGTGACGTACATGTTGAGAGCGACAGAGGCCAGATTGCAAACCGCCACC 2083862
Query 62973 TCATTAGCATCCGCATATTGTATT-----ATCTCAGTGCAAAGATTACTACACTTGATAG 63027
|| | | | | || |||| | || || ||||| || || || |||||||| |
Sbjct 2083861 TCGTC--CTTGC---TAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGATGG 2083807
Query 63028 TTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAG 63087
| || | ||| || || || ||||| |||| || ||||| || || | ||| | || |
Sbjct 2083806 TGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCG 2083747
Query 63088 TACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGA-CGACTCGAGCCTTTATTATA 63146
| || ||||| |||| || || || || || | ||| | | || ||||||| | | |
Sbjct 2083746 TCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCATAGCTGCT-GAGCCTTCACCACA 2083688
Query 63147 GATTTGTATCTCCTTTCTCTTTCGTATAGAGTATACAATCGTTCGAACTCGTCTCCCCAA 63206
|| |||| || | || ||| || || | | ||| ||||| || |||||
Sbjct 2083687 CGCTTCACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCCCAG 2083628
Query 63207 ACATTGTCCAATCTAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTC 63266
| |||| | || || || |||||||||||| ||||| ||| ||| | || |
Sbjct 2083627 CACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCGTTGTTCTCC 2083568
Query 63267 ACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTTGTTCTATGT 63326
|| || ||||| ||||| ||||| ||||| || || || || || || | || ||
Sbjct 2083567 ACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCTGGCTCGCTGC 2083508
Query 63327 TCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGT 63386
||||| ||||| || ||||| || || || ||||| | | | ||| | ||||| ||
Sbjct 2083507 TCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCAGGGC 2083448
Query 63387 TCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCG 63446
|||| ||| ||||| | | || || | |||||| || |||||||| | || | ||
Sbjct 2083447 TCCAGGTACATGGCGAAGGCGCCGGGTCTTTTGTTGCCCCCCTGATCAACATAACGCGCT 2083388
Query 63447 GTGTTATTATAAACTCTCAACATTGGAATAATACCGTTTGATATACCATTGGTACCGGAG 63506
||||| || ||||| ||||||||||| | | ||||| || || ||||| |||| |
Sbjct 2083387 GTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTGCCGGCG 2083328
Query 63507 ATATAGCCTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTA 63566
|| |||| || ||| | ||| || | || | || || || || || |||
Sbjct 2083327 ATGTAGCTCCCCGTGGATCTAATGCAGCTGACTGCCACGCCAATCCCTCCAGCTGATTTG 2083268
Query 63567 GAGATTAATGCGCATCGTTTTAACGTGTCATAGATGCCTTCTATGCTATCATCGATCATG 63626
||||| | ||||| | |||| |||||| ||||| || || ||||| ||||| |||||
Sbjct 2083267 GAGATGAGGGCGCAATGCTTTAGCGTGTCGTAGATCCCCTCGATGCTGTCATCCTTCATG 2083208
Query 63627 TTAAGTAGAAAACAGCTAGACATTTGGTGACGAGTAGTTCCCGCATTAAATAAGGTAGGA 63686
|| || || ||||| |||| || | | | ||||| ||||| || | ||| ||
Sbjct 2083207 GCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCATTGAAGAGGGTCGGG 2083148
Query 63687 GAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATA 63746
|| ||||| || ||||| || || || || || ||||| ||||| || ||| || |||
Sbjct 2083147 GAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCGATGACTGCTTCGATA 2083088
Query 63747 TCCCATTGATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACAATT 63806
||| || ||||| || || || | ||| | ||||||||| || | ||| | | |
Sbjct 2083087 TCCGTCCCGTGGATTCCCACAGCCACCCTCATGAGCATGTGCTGCGGACGCTCAGCTACT 2083028
Query 63807 TTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTAT 63866
||| || || || | || |||||| |||| ||| || || ||||| |||||||
Sbjct 2083027 TTGCCATTGATCTTTAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAG 2082968
Query 63867 GAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGCTTATCCTTATATTTGTTAACTATA 63926
|| || |||| || || || || |||| || || || || | | ||| ||
Sbjct 2082967 GAGAAATCTCTGTCATAGATTATGGCCGAGTTAAGGCGGTCTTTGTTTGCAAGAACAATG 2082908
Query 63927 TCCATGGTAATACTTGAAATAATCGGAGAATGTTTCCCATTTTTA--GGATTAACATAGT 63984
|| | || | ||||| || |||| | || | | || | || || | ||||
Sbjct 2082907 TCAAGTGTGTCTTTCGAAATCAT-GGAGGA-GTGGCGTTTGTTCAGGGGGTTGATGTAGT 2082850
Query 63985 TGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATA 64044
|| | | |||||||| || || || || | || || || || ||||| | || || |
Sbjct 2082849 TGTACAGGTCCTCCATGACGTCGCTGAACACCTTCTTCGTCTCTTTGTGCAAGTTAGAGA 2082790
Query 64045 TGGCTATTCTGGCGGCTAGAATGGCATAATCCGGATGTTGTGTAGTACAAGTGGCTGCTA 64104
||| || | || || || ||||| || || || | | || || |||||| || |
Sbjct 2082789 CGGCGATGCGTGCTGCGAGGATGGCGTAGTCGGGGTACTTGGTTGTGAGAGTGGCAGCGA 2082730
Query 64105 TTTCGGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATATATTCCTTGAATAA 64164
| || || ||||| ||||| | || || || || || || | || | || || || |
Sbjct 2082729 TCTCCGCCGCCAGCGTGTCGAGCTCCACAGTGGTGACGCCGCTGTACAAACCCTGGATGA 2082670
Query 64165 CCTTCATAGCTATTTTAATAGGATCTATATGATCCGTGTTTAAGCCATAGCACAATTTTC 64224
||||||| | || | || || | | ||| |||| | || ||||| || |||
Sbjct 2082669 CCTTCATCGTGATCTGGGCTGGGTCCACAAACTCCATGTTGAGTCCGTAGCA-AAGCTTC 2082611
Query 64225 T-AATACGAGACGTGATTTTATCAAACATGAC 64255
| || ||||| |||||||| || ||||||||
Sbjct 2082610 TGGATGCGAGATGTGATTTTGTCGAACATGAC 2082579
>seq1157
Length=2784775
Score = 105 bits (116), Expect = 8e-18
Identities = 100/128 (78%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 62997 ATCTCAGTGCAAAGATTACTACACTTGATAGTTCCTAAATTTTGTTGATTACTCTTTTTG 63056
||||| ||||| ||||| || | |||||||| || | ||||| |||||||||||| ||
Sbjct 2749602 ATCTCTGTGCACAGATTGCTGGATTTGATAGTGCCCAGGTTTTGCTGATTACTCTTTCTG 2749543
Query 63057 TTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATC 63116
|| || |||||||| |||| ||| |||| ||||||||||| |||| || || || ||
Sbjct 2749542 TTGCAGGCATCCTTGTAAACCATGTATGGTGTACCAGTTTCTGTCTGCGACTCAATGATG 2749483
Query 63117 GCTTTCCA 63124
|| | |||
Sbjct 2749482 GCGTACCA 2749475
Score = 91.5 bits (100), Expect = 2e-13
Identities = 100/133 (75%), Gaps = 0/133 (0%)
Strand=Plus/Minus
Query 63663 GTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTG 63722
|| || || || || | |||||||||||||| || ||||| || || || || | |||
Sbjct 2748469 GTGCCAGCGTTGAACAGTGTAGGAGAAGCGTGAGTGAACCACTTCTCTGACAGCAAGTTG 2748410
Query 63723 TACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAAC 63782
|| |||||||| |||| || || || | || |||||| || |||| || | ||||| |
Sbjct 2748409 TAGGTCTCAATGGCTGCATCAATGTCACCTTTATGAATCCCGACTGACACTCTCATTAGC 2748350
Query 63783 ATGTGCTGAGGTC 63795
|||||||| ||||
Sbjct 2748349 ATGTGCTGGGGTC 2748337
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 629789612480400
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