Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 412 5e-110
seq1157 96.9 5e-15
seq3467 86.0 8e-12
>seq3478
Length=3494213
Score = 412 bits (456), Expect = 5e-110
Identities = 1070/1615 (66%), Gaps = 21/1615 (1%)
Strand=Plus/Minus
Query 71408 CGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTAT 71467
|||| || || || ||||| || || || ||||||| || || || || |||| | |
Sbjct 2084184 CGGCCAGCTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATGT 2084125
Query 71468 TGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGAGAATAAACGCGTCTGCTA 71527
|||| ||| || || ||||| ||||| |||||| | || || || || || || |
Sbjct 2084124 TGAGCAGTTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAAGCATCAGCCA 2084065
Query 71528 ATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAA 71587
|||| || || || || || || || ||||| | | | || || | |||||| |
Sbjct 2084064 ATCCCTGGACCCCGATTCCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCA 2084005
Query 71588 TAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCAC-- 71645
|| || || || || || |||| || || | || ||||| ||||||||| |||
Sbjct 2084004 CCGGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGG 2083945
Query 71646 ATCCTTTAGTTTGAGAAAATCAAATCTCCCATCTA---TTACAAACACGTTCAAGGCAAC 71702
|| | | ||| ||| ||| | ||| || | || ||| ||| | || ||
Sbjct 2083944 ATGCC--AATTTTTTAAAGTCATAAGTCCGCTCAGGGGTGACGTACATGTTGAGAGCGAC 2083887
Query 71703 AGATGCCAGATTACAAACGGCTACCTCAT--TAGCATCGGCATATTGTATAATTTCAGTG 71760
||| |||||||| ||||| || ||||| | | || | || | | ||||| |||
Sbjct 2083886 AGAGGCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTG--TACTCGACGATTTCCGTG 2083829
Query 71761 CAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCA 71820
|| || || || ||||||||||| || | ||| || || || ||||| |||| || |||
Sbjct 2083828 CAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCA 2083769
Query 71821 TCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAG 71880
|| || || | || |||| || || ||||| |||| || || || || || | |||
Sbjct 2083768 TCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCAT 2083709
Query 71881 A-CGACTCGAGCCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAA 71939
| | || ||||||| | | | ||| ||| || | || ||| || || |
Sbjct 2083708 AGCTGCT-GAGCCTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGTGTAGAG 2083650
Query 71940 TCGTTCGAACTCGTCTCCCCAAGCATTG-TCTAATCCAGGACATTCATTCGGACACATCA 71998
| ||| ||||| || ||||| ||| | || | || || || || |||||||||||
Sbjct 2083649 TTCTTCAAACTCCTCCCCCCA-GCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCA 2083591
Query 71999 ATGACCACTCTCCATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTA 72058
||||| ||| | | | | || || ||||| ||||| ||||| ||||| || ||
Sbjct 2083590 GGGACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGT 2083531
Query 72059 TAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACG 72118
|| || || |||| || |||||||| ||||| || ||||| || || || |||||
Sbjct 2083530 AGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGT 2083471
Query 72119 CCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTC 72178
| | | ||| | ||||| || |||| ||| ||||| | | || || | |||||| |
Sbjct 2083470 CAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTGTTGC 2083411
Query 72179 CTCCCTGATCTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCAT 72238
| |||||||| | || | || ||||| || ||||| ||||||||||| | | || |
Sbjct 2083410 CCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGT 2083351
Query 72239 TGGATGCACCATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATA 72298
|||| || ||||| |||| ||| ||||| || ||| | ||| ||| | || |
Sbjct 2083350 TGGAACAGCCGTTGGTGCCGGCGATGTAGCTCCCCGTGGATCTAATGCAGCTGACTGCCA 2083291
Query 72299 GACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGC 72358
|| || || || || ||| ||||| | ||||| | |||| ||| || ||||| |
Sbjct 2083290 CGCCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTTAGCGTGTCGTAGATCC 2083231
Query 72359 CCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAG 72418
|||| || || |||||| ||||| || || || ||||| |||| || | | | |
Sbjct 2083230 CCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGG 2083171
Query 72419 TTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGT 72478
|||| ||||| || | ||| || || ||||| || ||||| || || ||||| || ||||
Sbjct 2083170 TTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTGT 2083111
Query 72479 ACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACA 72538
| ||||| || ||| ||| |||||| || ||||| || || || | ||| | ||
Sbjct 2083110 AGGTCTCGATGACTGCTTCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATGAGCA 2083051
Query 72539 TATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAG 72598
| ||||| || | ||| | | ||| ||| || || | || |||||| |||| ||
Sbjct 2083050 TGTGCTGCGGACGCTCAGCTACTTTGCCATTGATCTTTAGCAGGTAGGAGCGCTCCAGAG 2082991
Query 72599 TTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTT 72658
| || || ||||| ||||||| || || |||| || || || || |||| || ||
Sbjct 2082990 TCTTGAAGCCAAAGAAGTTGTAGGAGAAATCTCTGTCATAGATTATGGCCGAGTTAAGGC 2082931
Query 72659 TATCCTTATATTTGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCC 72718
|| || | | ||| || || | ||| | ||||| || |||| | || |
Sbjct 2082930 GGTCTTTGTTTGCAAGAACAATGTCAAGTGTGTCTTTCGAAATCAT-GGAGGA-GTGGCG 2082873
Query 72719 CATTTTTA--GGATTAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttt 72776
| || | || || | |||||| | | |||||||| || || || || | || ||
Sbjct 2082872 TTTGTTCAGGGGGTTGATGTAGTTGTACAGGTCCTCCATGACGTCGCTGAACACCTTCTT 2082813
Query 72777 tGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG 72836
|| || ||||| | || || ||||| || | || || || ||||| || || || |
Sbjct 2082812 CGTCTCTTTGTGCAAGTTAGAGACGGCGATGCGTGCTGCGAGGATGGCGTAGTCGGGGTA 2082753
Query 72837 TTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTAC 72896
| || || |||||| || || || || ||||| ||||| | || || || || ||
Sbjct 2082752 CTTGGTTGTGAGAGTGGCAGCGATCTCCGCCGCCAGCGTGTCGAGCTCCACAGTGGTGAC 2082693
Query 72897 TCCATTATATATTCCTTGGATAACCTTCATAGCTATTTTAATAGGATCTATATGATCAGT 72956
|| | || | || ||||| |||||||| | || | || || | | || |
Sbjct 2082692 GCCGCTGTACAAACCCTGGATGACCTTCATCGTGATCTGGGCTGGGTCCACAAACTCCAT 2082633
Query 72957 GTTTAAGCCATAACATAATTTTCT-AATACGAGACGTGATTTTATCAAACATAAC 73010
||| | || || || || |||| || ||||| |||||||| || ||||| ||
Sbjct 2082632 GTTGAGTCCGTAGCA-AAGCTTCTGGATGCGAGATGTGATTTTGTCGAACATGAC 2082579
>seq1157
Length=2784775
Score = 96.9 bits (106), Expect = 5e-15
Identities = 121/166 (73%), Gaps = 0/166 (0%)
Strand=Plus/Minus
Query 72761 CACTAAATAGtttttttGTTTCCTTGTGTAGATTTGATACGGCTATTCTGGCGGCTAGAA 72820
|||| |||| ||| || || || ||||| || || ||||| || || | || || || |
Sbjct 2746709 CACTGAATACTTTCTTGGTCTCTTTGTGCAGGTTAGATACAGCGATGCGTGCAGCCAGGA 2746650
Query 72821 TGGCATAATCTGGATGTTGTGTAGTACAAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCA 72880
||||| ||||| |||| || || |||||| || | ||||||||||||||||| |
Sbjct 2746649 CTGCATAGTCTGGGTGTTTGGTTGTGAGAGTGGCAGCAGTCTCTGCTGCCAGAGTGTCGA 2746590
Query 72881 ATTCTACCGTTGTTACTCCATTATATATTCCTTGGATAACCTTCAT 72926
|| || || || |||||| | || | || ||||| ||||||||
Sbjct 2746589 GCTCCACTGTGGTGACTCCACTGTACAAACCCTGGATCACCTTCAT 2746544
Score = 87.8 bits (96), Expect = 2e-12
Identities = 96/128 (75%), Gaps = 0/128 (0%)
Strand=Plus/Minus
Query 71752 ATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTG 71811
|| || ||||| ||||| || | ||||| || || | ||||| |||||||||||| ||
Sbjct 2749602 ATCTCTGTGCACAGATTGCTGGATTTGATAGTGCCCAGGTTTTGCTGATTACTCTTTCTG 2749543
Query 71812 TTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATC 71871
|| || |||||||| |||| || | || ||||||||||| |||| || || || ||
Sbjct 2749542 TTGCAGGCATCCTTGTAAACCATGTATGGTGTACCAGTTTCTGTCTGCGACTCAATGATG 2749483
Query 71872 GCTTTCCA 71879
|| | |||
Sbjct 2749482 GCGTACCA 2749475
>seq3467
Length=3272559
Score = 86.0 bits (94), Expect = 8e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Minus
Query 42335 TATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAAT 42394
|| || ||||||| || || ||||| ||||| || ||||| || ||||| ||||| ||
Sbjct 2317861 TACGTGTCGATCAGCAGGCTGTACATCTCTGAGTGGATGTTCTCCATGGCGATCTGGAAA 2317802
Query 42395 CCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429
||||||||||| | |||||| || ||||| |||||
Sbjct 2317801 CCGTAGAAACACCGGGCCTCCGTTACCTGCACTTC 2317767
Score = 86.0 bits (94), Expect = 8e-12
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 42335 TATGTATCGATCAAAAGACTATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAAT 42394
|| || ||||||| || || ||||| ||||| || ||||| || ||||| ||||| ||
Sbjct 2329089 TACGTGTCGATCAGCAGGCTGTACATCTCTGAGTGGATGTTCTCCATGGCGATCTGGAAA 2329148
Query 42395 CCGTAGAAACATCTGGCCTCGGTAACCTGTACTTC 42429
||||||||||| | |||||| || ||||| |||||
Sbjct 2329149 CCGTAGAAACACCGGGCCTCCGTTACCTGCACTTC 2329183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671109376251800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |