Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq3478 150 3e-31 >seq3478 Length=3494213 Score = 150 bits (166), Expect = 3e-31 Identities = 331/492 (67%), Gaps = 12/492 (2%) Strand=Plus/Plus Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935 ||||| ||||| ||| | || ||||| | ||| | ||| |||| || |||||| || Sbjct 2083404 CAGGGGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACTTCGAT 2083463 Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCACGAGCCAGGGAC 96995 || |||||||| | ||| || || ||| | || || ||| |||||||||||| Sbjct 2083464 GTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGCCAGGGAC 2083523 Query 96996 TTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGT---CAACGACGGTGGC 97052 |||| || || || ||| | || || | ||||||||||| || ||| ||| | Sbjct 2083524 CTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAACGAAG-- 2083581 Query 97053 TACTGGAGCCTAATGTGCCCCGACTCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGAG 97112 ||||| ||| ||||| || | | | ||||| ||| || |||||||| || ||| Sbjct 2083582 -ACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGAGGAG 2083640 Query 97113 TTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCG---AT 97169 ||||| | ||||| || ||| | ||||| || |||| || || | | Sbjct 2083641 TTTGAAGAACTCTACACCAGATATGAGAAGGAGGG--GA-GGGTGAAGCGTGTGGTGAAG 2083697 Query 97170 GCACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATT 97229 || | | || ||| | || ||| | | | ||| ||| || || || |||||||| Sbjct 2083698 GCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTACATG 2083757 Query 97230 CTCTACAAGGATACCGTGAATCGCAACAGCAACCAACGCCACTTGGGCACCATCAAGGGC 97289 ||||||| ||| || || | || |||||||| | | |||||||||||||| || Sbjct 2083758 GTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGTGC 2083817 Query 97290 TCCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTGCGTT 97349 ||| || ||||||||||| || |||||| | ||||||| ||| |||||| | Sbjct 2083818 AGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTTGCAAT 2083877 Query 97350 CTGGCATCGGTC 97361 ||||| || ||| Sbjct 2083878 CTGGCCTCTGTC 2083889 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741026269181800