Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_005832.1
Length=106332
Score E
Sequences producing significant alignments: (Bits) Value
seq3011 127 1e-24
>seq3011
Length=8691009
Score = 127 bits (140), Expect = 1e-24
Identities = 134/175 (77%), Gaps = 1/175 (1%)
Strand=Plus/Minus
Query 25773 CATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCGGTCCTAGGTC 25832
|||||| ||||||||||| || || | |||||||||||| || ||||| || ||||||||
Sbjct 8387131 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTC 8387072
Query 25833 TCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAACCATTGGCGTC 25892
|| ||||| |||| || || || |||| |||||| | || || ||||| ||
Sbjct 8387071 ACCCTCTTCTCTGTCAGTGAACCCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATC 8387012
Query 25893 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 25946
||||||||| || || || || || ||||| ||||| ||||| || |||| ||||
Sbjct 8387011 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 8386957
Score = 100 bits (110), Expect = 2e-16
Identities = 120/162 (74%), Gaps = 1/162 (1%)
Strand=Plus/Minus
Query 25491 AGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAGCTGGCGATGTTAAAGGGT 25550
|| || |||| || || |||||||| || || || | |||||||||||||| || ||
Sbjct 8387944 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 8387885
Query 25551 ACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTTCGTCGCT 25610
|| || || ||||| || | || | |||||| ||||||||||| ||||| ||||||
Sbjct 8387884 ACTCCTAATCCCATATCAGCT-GAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCA 8387826
Query 25611 CACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTAT 25652
|||||| ||||| || | | || ||| || || || || ||
Sbjct 8387825 CACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 8387784
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 340122863007015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |