Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq2443 93.3 2e-14
seq3209 86.0 3e-12
seq2664 84.2 1e-11
seq3191 82.4 4e-11
seq2988 82.4 4e-11
seq2911 82.4 4e-11
seq1678 82.4 4e-11
seq646 82.4 4e-11
>seq2443
Length=9576630
Score = 93.3 bits (102), Expect = 2e-14
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 11440 TAATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCA 11499
||| | ||||| || ||||||| | |||||||||| ||||||| ||||||||||||
Sbjct 3985935 TAAAAGAAAATAAAGTTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCA 3985994
Query 11500 CGACGCTCTRACCAACTGAGCTAATGGGCC 11529
| ||||||| |||||||||||||| ||||
Sbjct 3985995 CCACGCTCTAACCAACTGAGCTAACCGGCC 3986024
>seq3209
Length=6673090
Score = 86.0 bits (94), Expect = 3e-12
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Plus
Query 11446 AAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGC 11505
||| | ||| |||||| | |||||||||| ||||||| ||||||||||||| ||||
Sbjct 3622416 AAATTTAAACTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGC 3622475
Query 11506 TCTRACCAACTGAGCTAATGGGCC 11529
||| |||||||||||||| ||||
Sbjct 3622476 TCTAACCAACTGAGCTAACCGGCC 3622499
Score = 84.2 bits (92), Expect = 1e-11
Identities = 72/89 (81%), Gaps = 2/89 (2%)
Strand=Plus/Minus
Query 11441 AATAAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCAC 11500
|||||||| | | |||||| | |||||||||| ||||||| |||||||||||||
Sbjct 3622694 AATAAAAA--CCTACTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCAC 3622637
Query 11501 GACGCTCTRACCAACTGAGCTAATGGGCC 11529
||||||| |||||||||||||| ||||
Sbjct 3622636 CACGCTCTAACCAACTGAGCTAACCGGCC 3622608
Score = 84.2 bits (92), Expect = 1e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
||||||| | |||||||||| ||||||| ||||||||||||| ||||||| |||||
Sbjct 3852259 TTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAA 3852318
Query 11515 CTGAGCTAATGGGCC 11529
||||||||| ||||
Sbjct 3852319 CTGAGCTAACCGGCC 3852333
>seq2664
Length=10829054
Score = 84.2 bits (92), Expect = 1e-11
Identities = 71/87 (82%), Gaps = 1/87 (1%)
Strand=Plus/Minus
Query 11444 AAAAAATCAAAT-TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGA 11502
||||| ||| | |||||| | |||||||||| ||||||| ||||||||||||| |
Sbjct 5350471 AAAAACGCAACTGTGGCCCGTACGGGGATCGAACCCGCGACCTTGGCGTTATTAGCACCA 5350412
Query 11503 CGCTCTRACCAACTGAGCTAATGGGCC 11529
|||||| |||||||||||||| ||||
Sbjct 5350411 CGCTCTAACCAACTGAGCTAACCGGCC 5350385
>seq3191
Length=123143
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 85248 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 85307
Query 11528 CC 11529
||
Sbjct 85308 CC 85309
>seq2988
Length=7258707
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 5099009 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 5099068
Query 11528 CC 11529
||
Sbjct 5099069 CC 5099070
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 5101716 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 5101775
Query 11528 CC 11529
||
Sbjct 5101776 CC 5101777
>seq2911
Length=7281675
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 5547877 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 5547936
Query 11528 CC 11529
||
Sbjct 5547937 CC 5547938
>seq1678
Length=1613810
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 780724 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 780783
Query 11528 CC 11529
||
Sbjct 780784 CC 780785
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 781013 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 781072
Query 11528 CC 11529
||
Sbjct 781073 CC 781074
>seq646
Length=3625607
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 173415 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 173474
Query 11528 CC 11529
||
Sbjct 173475 CC 173476
Score = 82.4 bits (90), Expect = 4e-11
Identities = 55/62 (89%), Gaps = 0/62 (0%)
Strand=Plus/Plus
Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527
|||||||||| ||||||| ||||||||||||| ||||||| |||||||||||||| ||
Sbjct 182145 GGATCGAACCCGCGACCTTGGCGTTATTAGCACCACGCTCTAACCAACTGAGCTAACCGG 182204
Query 11528 CC 11529
||
Sbjct 182205 CC 182206
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261479870485180
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |