Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 181 3e-40
seq1157 84.2 6e-11
>seq3478
Length=3494213
Score = 181 bits (200), Expect = 3e-40
Identities = 555/844 (66%), Gaps = 22/844 (3%)
Strand=Plus/Plus
Query 363430 ATCAATGGTGATATTGTTGAACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATC 363489
|||||||| | | | ||| || |||||||| ||| | ||| | || ||| | || |||
Sbjct 2083017 ATCAATGGCAAAGTAGCTGAGCGTCCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATC 2083076
Query 363490 CATTGCCCGGATGTTGATGCCGCGATTGAAACATATAAGCTTCTA--AGTGCTCGTGTAT 363547
|| | ||||| | || || | || || || || || || || || | ||| |
Sbjct 2083077 CACGGGACGGATATCGAAGCAGTCATCGAGACCTACAACCTGCTGTCAGAGAA-GTGG-T 2083134
Query 363548 TCACGCACGCCACGCCAACAATGTACAATGCTGGAACTCGTAATCCACAGATGTCTTCTT 363607
|||| |||||| | || || | | |||||||||||| | || ||| |||| |
Sbjct 2083135 TCACCCACGCCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCT 2083194
Query 363608 GCTTTCTTCTAAAAATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATT 363667
|||| || || |||||||| || ||||||||| |||| ||||| || ||| |||
Sbjct 2083195 GCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGGATCTACGACACGCTAAAGCATT 2083254
Query 363668 GTGCTCTTATTTCCAAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCG-TGCA 363726
| || || || ||||| || || || ||||| || | || | || | | ||
Sbjct 2083255 GCGCCCTCATCTCCAAATCAGCTGGAGGGATTGGCGTGGCAGTCAGCTGCATTAGATCCA 2083314
Query 363727 CAGAACAGTTACATTCGCGGCACAGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGT 363786
| | || ||||| |||||| || | || || ||||| || || ||| | |
Sbjct 2083315 C-GGGGAGCTACATCGCCGGCACCAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGG 2083373
Query 363787 GTGTTTGACAATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGT 363844
|| | |||| || ||| | || || || ||||| || | |||| | || || |
Sbjct 2083374 GTTTACAACAACACAGCGCGTTATGTTGATCAGGGGGGCAACAAAAGACC--CGGCGCCT 2083431
Query 363845 TTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAA 363904
| || ||||| || ||||| || |||| | ||||| || || ||||| ||| |
Sbjct 2083432 TCGCCATGTACCTGGAGCCCTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGA 2083491
Query 363905 ACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACC 363964
|||||||||| ||||| ||| || | || |||||||| || || ||| | ||||||
Sbjct 2083492 ACACGGGAAAGGAGGAGCAGCGAGCCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACC 2083551
Query 363965 ATTTTATGAAGCGCGTGGAG-GCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGT 364023
|| |||||||| |||||| || ||| | ||||| || | || || ||| ||
Sbjct 2083552 TCTTCATGAAGCGGGTGGAGAACAACGAAG-ACTGGTCCCTGATGTGTCCGGCCGACTGC 2083610
Query 364024 CCAGGTCTTTCCGATGTATGGGGTGACGACTATGTTG--CTCTATACGAAAAGTATGAAT 364081
|| || || || ||||| || || | || | ||||| || | | |||||
Sbjct 2083611 CCCGGGCTGGATGAGTGCTGGGGGGAGGAGTTTGAAGAACTCTACACCAGA--TATGAGA 2083668
Query 364082 CGGAGGGAAAGG---CTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGG 364138
|||||| | || ||| | | || ||| ||||||||| ||| ||||| |
Sbjct 2083669 AGGAGGGGAGGGTGAAGCGTGTG---GTGAAGGCTCAGCAGCTATGGTATGCAATCATCG 2083725
Query 364139 ATTCGCAGATTGAGACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGT 364198
| ||||||| || || || || || || ||| | ||||||||| | |||||| | |||
Sbjct 2083726 AGTCGCAGACAGAAACCGGGACGCCGTACATGGTCTACAAAGATGCCTGCAACAGGAAGA 2083785
Query 364199 CCAACCAGCAGCACCTTGGTACAATTCAGCAGAGCAACCTATGTACCGAGATTATTGAAT 364258
|||||||||| | || || || || || |||||||| || || || || | || |
Sbjct 2083786 GCAACCAGCAGAATCTGGGCACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTCGAGT 2083845
Query 364259 ACAC 364262
||||
Sbjct 2083846 ACAC 2083849
>seq1157
Length=2784775
Score = 84.2 bits (92), Expect = 6e-11
Identities = 106/146 (73%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 363838 GGGGCGTTTGCTATGTATCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTC 363897
|||||||| |||||||| |||||||| ||| | ||| | || |||||| | ||| |
Sbjct 2748995 GGGGCGTTCGCTATGTACCTCGAGCCGTGGCATTCTGATGTGTTCGAGTTTTTGGAGTTG 2749054
Query 363898 CGGAAAAACACGGGAAAAGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTT 363957
||| |||||||| ||||| || | | || || || ||||| | || | ||| |
Sbjct 2749055 AAGAAGAACACGGGTAAAGAAGAGCAGAGGGCGCGGGACCTGTTTTTCGCCTTGTGGATC 2749114
Query 363958 TCTGACCATTTTATGAAGCGCGTGGA 363983
| |||| |||||||||||| |||||
Sbjct 2749115 CCAGACCTTTTTATGAAGCGAGTGGA 2749140
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303294234280010
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |