Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq3522 102 7e-17 >seq3522 Length=4083170 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| | | ||| | | || |||| || Sbjct 3190511 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 3190452 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || |||| ||| ||||| || | ||| || ||||| |||| Sbjct 3190451 TTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTG 3190392 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 |||||| | | | ||||||| |||||| || | ||||||||| || || || Sbjct 3190391 GCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTG 3190332 Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938 |||||||| ||||| |||||||| || Sbjct 3190331 AGCGTTTTCACAAAGATCTGCATGTT 3190306 Score = 84.2 bits (92), Expect = 2e-11 Identities = 142/206 (69%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| | | ||| | | || |||| || Sbjct 3219833 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 3219774 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || |||| ||| ||||| || | |||||| || || |||| Sbjct 3219773 TTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTG 3219714 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||||| | |||||| || | |||||||| || || || Sbjct 3219713 GCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTT 3219654 Query 16913 AGCGTTTTGACAAAAATCTGCATTTT 16938 || ||||| ||||| |||||||| || Sbjct 3219653 AGGGTTTTCACAAAGATCTGCATGTT 3219628 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| | | ||| | | || |||| || Sbjct 3190967 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 3190908 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || |||| ||| ||||| || | |||||| || || |||| Sbjct 3190907 TTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTG 3190848 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||||| | |||||| |||| ||||||||| || || || Sbjct 3190847 GCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTG 3190788 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 3190787 AGGGTCTTCACGAAGATCTGCAT 3190765 Score = 82.4 bits (90), Expect = 6e-11 Identities = 140/203 (69%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 16733 TGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCCAATTGT 16792 || || ||||||||||| || ||||||||||| | | ||| | | || |||| || Sbjct 3191195 TGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGC 3191136 Query 16793 TTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTCGGCAATTTGC 16852 ||||| ||| | || |||| ||| ||||| || | |||||| || || |||| Sbjct 3191135 TTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTG 3191076 Query 16853 TGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTTTTCCGGTC 16912 ||| || | | | ||||| | |||||| |||| ||||||||| || || || Sbjct 3191075 GCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTG 3191016 Query 16913 AGCGTTTTGACAAAAATCTGCAT 16935 || || || || || |||||||| Sbjct 3191015 AGGGTCTTCACGAAGATCTGCAT 3190993 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405070448929450