Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 91.5 1e-13
>seq3522
Length=4083170
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || ||||||| | || || ||| | |
Sbjct 3190537 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3190596
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| |||||| ||||| ||||| ||||| || |||||
Sbjct 3190597 GACACAATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3190656
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||||||||| || ||||||||| ||||| | || |||||
Sbjct 3190657 CAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAAC 3190716
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || || ||||| || ||
Sbjct 3190717 ATCCAGAAGGAGTCCACCCTCCA 3190739
Score = 91.5 bits (100), Expect = 1e-13
Identities = 142/203 (70%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||| || || || ||||| | || || || ||||||| | || || ||| | |
Sbjct 3191221 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3191280
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| |||||| ||||| ||||| ||||| || |||||
Sbjct 3191281 GACACAATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3191340
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
||| || | || ||||||||||| || ||||||||| ||||| | || |||||
Sbjct 3191341 CAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAAC 3191400
Query 25179 ATTCAAAAAGAATCCACGCTACA 25201
|| || || || ||||| || ||
Sbjct 3191401 ATCCAGAAGGAGTCCACCCTCCA 3191423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433309225387325
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |