Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_010240.1 Length=169794 Score E Sequences producing significant alignments: (Bits) Value seq3522 116 4e-21 seq1379 102 9e-17 seq1290 91.5 2e-13 seq3256 89.7 6e-13 seq2 89.7 6e-13 seq3155 87.8 2e-12 seq3191 86.0 7e-12 >seq3522 Length=4083170 Score = 116 bits (128), Expect = 4e-21 Identities = 169/239 (71%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 41973 ATTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTG 42032 |||||| | || || || | ||||| || | || | ||| |||||| || || ||| Sbjct 3219866 ATTTATTGGCCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTG 3219807 Query 42033 TAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGG 42092 || |||| || || || | || || |||||||| ||||| || || || | ||||||| Sbjct 3219806 TAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGG 3219747 Query 42093 TCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTC 42152 |||| || | || |||||| ||| |||||| |||| || | | ||||| || Sbjct 3219746 TCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTG 3219687 Query 42153 GATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 42211 | || || |||| |||||||| || || ||||| || || |||||||| ||||| || Sbjct 3219686 GGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCATGTT 3219628 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| || || || | || || |||||||| ||||| || Sbjct 3190956 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 3190897 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||||| || | || |||||| ||| |||||| |||| | Sbjct 3190896 GATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTT 3190837 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | || || || | |||||||| ||||| || || ||||| || Sbjct 3190836 CTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 3190777 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 3190776 GAAGATCTGCAT 3190765 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| || || || | || || |||||||| ||||| || Sbjct 3191184 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAA 3191125 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||||| || | || |||||| ||| |||||| |||| | Sbjct 3191124 GATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTT 3191065 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | | ||||| || | || || || | |||||||| ||||| || || ||||| || Sbjct 3191064 CTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 3191005 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 3191004 GAAGATCTGCAT 3190993 Score = 100 bits (110), Expect = 3e-16 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 41974 TTTATCGACCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGT 42033 |||| | || || || | ||||| || | || | ||| |||||| || || |||| Sbjct 3191683 TTTACTGCCCACCCCTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGT 3191624 Query 42034 AATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGT 42093 | |||| || || || | || || |||||||| ||||| || || || | |||||||| Sbjct 3191623 AGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGT 3191564 Query 42094 CGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCG 42153 ||| || | || |||||| ||| ||| || |||| || | | ||||| || | Sbjct 3191563 CGGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGG 3191504 Query 42154 ATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 42208 || || || | |||||||| ||||| || || ||||| || ||||| ||||| Sbjct 3191503 GCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191449 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| || || || | || ||||||||||| || || || Sbjct 3190728 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAA 3190669 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||||| || | || ||||||||| |||||| || | | Sbjct 3190668 GATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTT 3190609 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || | || || || | |||||||| ||||| || || ||||| || Sbjct 3190608 TTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 3190549 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 3190548 GAAGATCTGCAT 3190537 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42017 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 42076 |||||| || || ||||| |||| || || || | || ||||||||||| || || || Sbjct 3191412 CTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAA 3191353 Query 42077 TATGAGTCGCTGCTGGTCGGCTGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 42136 || || | ||||||||||| || | || ||||||||| |||||| || | | Sbjct 3191352 GATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTT 3191293 Query 42137 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 42196 | | ||||| || | || || || | |||||||| ||||| || || ||||| || Sbjct 3191292 TTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCAC 3191233 Query 42197 AAAGATTTGCAT 42208 ||||| ||||| Sbjct 3191232 GAAGATCTGCAT 3191221 >seq1379 Length=720876 Score = 102 bits (112), Expect = 9e-17 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 56998 AAAAATTTTCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 57057 ||| ||||||||| || | | |||||||||| ||||||||||||||||||||| |||| Sbjct 211507 AAAGATTTTCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATAC 211448 Query 57058 TCACCACTATACTACCGAGGA 57078 |||||||||||||| |||||| Sbjct 211447 TCACCACTATACTAACGAGGA 211427 >seq1290 Length=2399113 Score = 91.5 bits (100), Expect = 2e-13 Identities = 65/75 (87%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1724908 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1724967 Query 57067 TACTACCGAGGATTG 57081 ||||| |||||| || Sbjct 1724968 TACTAACGAGGACTG 1724982 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1717953 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1718012 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1718013 TACTAACGAGGA 1718024 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1719411 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1719470 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1719471 TACTAACGAGGA 1719482 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1722411 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1722470 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1722471 TACTAACGAGGA 1722482 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1723920 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1723979 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1723980 TACTAACGAGGA 1723991 >seq3256 Length=4358345 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1764537 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1764596 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1764597 TACTAACGAGGA 1764608 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1765186 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1765245 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1765246 TACTAACGAGGA 1765257 Score = 89.7 bits (98), Expect = 6e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||||||||||| Sbjct 1765800 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTCACCACTA 1765859 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 1765860 TACTAACGAGGA 1765871 >seq2 Length=10904619 Score = 89.7 bits (98), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 7371076 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 7371017 Query 57067 TACTACCGAGGATT 57080 ||||| |||||||| Sbjct 7371016 TACTAACGAGGATT 7371003 >seq3155 Length=5024138 Score = 87.8 bits (96), Expect = 2e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 57006 TCTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACT 57065 ||||| || | | |||||||||| ||||||||||||||||||||| ||||| |||||| Sbjct 4946618 TCTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACT 4946677 Query 57066 ATACTACCGAGGA 57078 |||||| |||||| Sbjct 4946678 ATACTAACGAGGA 4946690 >seq3191 Length=123143 Score = 86.0 bits (94), Expect = 7e-12 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 57007 CTCCTCGGCAAGAAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTA 57066 |||| || | | |||||||||| ||||||||||||||||||||| ||||| ||||||| Sbjct 120422 CTCCCCGTCGGGGAATCGAACCCCGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 120481 Query 57067 TACTACCGAGGA 57078 ||||| |||||| Sbjct 120482 TACTAACGAGGA 120493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 543188660981200