Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_010276.1
Length=156179
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 118 1e-21
>seq3522
Length=4083170
Score = 118 bits (130), Expect = 1e-21
Identities = 146/200 (73%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| | ||||| |||||||||||
Sbjct 3219827 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3219768
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||||||||| ||||| || || || || || ||||| |||
Sbjct 3219767 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTG 3219708
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
||| ||| | || |||| || || || || | ||| | |||||| || || | |||
Sbjct 3219707 ACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTT 3219648
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| || || || ||||| ||
Sbjct 3219647 TTCACAAAGATCTGCATGTT 3219628
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| | ||||| ||||||||||||
Sbjct 3190733 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCG 3190674
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||||||||| ||||| ||||| || || || ||||| |||
Sbjct 3190673 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTC 3190614
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||| |||| | || || || | || | ||||||||| || | ||
Sbjct 3190613 ACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 3190554
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 3190553 TTCACGAAGATCTGCAT 3190537
Score = 116 bits (128), Expect = 4e-21
Identities = 144/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| | ||||| ||||||||||||
Sbjct 3191417 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCTAGCTGCTTGCCG 3191358
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||||||||| ||||| ||||| || || || ||||| |||
Sbjct 3191357 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTC 3191298
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| || | ||| |||| | || || || | || | ||||||||| || | ||
Sbjct 3191297 ACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 3191238
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 3191237 TTCACGAAGATCTGCAT 3191221
Score = 113 bits (124), Expect = 5e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| | ||||| |||||||||||
Sbjct 3190961 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3190902
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||||||||| ||||| || || || || || ||||| |||
Sbjct 3190901 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTG 3190842
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || |||| || || || || | || | ||||||||| || | ||
Sbjct 3190841 ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 3190782
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 3190781 TTCACGAAGATCTGCAT 3190765
Score = 113 bits (124), Expect = 5e-20
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| | ||||| |||||||||||
Sbjct 3191189 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3191130
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||||||||| ||||| || || || || || ||||| |||
Sbjct 3191129 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTG 3191070
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || |||| || || || || | || | ||||||||| || | ||
Sbjct 3191069 ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 3191010
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 3191009 TTCACGAAGATCTGCAT 3190993
Score = 109 bits (120), Expect = 5e-19
Identities = 144/200 (72%), Gaps = 0/200 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| | ||||| |||||||||||
Sbjct 3190505 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3190446
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| ||||||||| || ||||| ||||| || || || ||||| |||
Sbjct 3190445 GCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTC 3190386
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || || | || || || || | || | ||||||||| || | |||
Sbjct 3190385 ACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGCGTT 3190326
Query 64427 TTTACGAAAATTTGCATTTT 64446
|| || || || ||||| ||
Sbjct 3190325 TTCACAAAGATCTGCATGTT 3190306
Score = 107 bits (118), Expect = 2e-18
Identities = 142/197 (72%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306
|| || || || || |||||||| || | || |||||| | ||||| |||||||||||
Sbjct 3191645 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3191586
Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366
||| | || |||| |||||||||||| ||||| || || || || || || || |||
Sbjct 3191585 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTG 3191526
Query 64367 ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGTT 64426
|| ||| | || |||| || || || || | || | ||||||||| || | ||
Sbjct 3191525 ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 3191466
Query 64427 TTTACGAAAATTTGCAT 64443
|| ||||| || |||||
Sbjct 3191465 TTCACGAAGATCTGCAT 3191449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 499622597034200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |