Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 161 1e-34
>seq3478
Length=3494213
Score = 161 bits (178), Expect = 1e-34
Identities = 591/922 (64%), Gaps = 10/922 (1%)
Strand=Plus/Plus
Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777
||| | | ||||| |||||| ||||||||| || ||||| || ||||| ||||||
Sbjct 2082969 TACAACTTCTTTGGCTTCAAGACTCTGGAGCGCTCCTACCTGCTAAAGATCAATGGCAAA 2083028
Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837
|| | ||||| ||||| || |||| ||| | || || | || || ||||| ||
Sbjct 2083029 GTAGCTGAGCGTCCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGAT 2083088
Query 93838 ATGCCGAAT--GTTTTGCGGGCTTTCAGAGACATGCGG---GACAAGAGGTATACCATGG 93892
|| |||| || | | | | || || ||| | || ||| ||| ||| |
Sbjct 2083089 AT--CGAAGCAGTCATCGAGACCTACA---ACCTGCTGTCAGAGAAGTGGTTCACCCACG 2083143
Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952
|| |||||||||| ||||| || || ||| ||| ||| |||| || ||||||
Sbjct 2083144 CCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGC 2083203
Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012
| | | |||| ||| |||| || || | ||||| || ||| | || || ||
Sbjct 2083204 TCGCCATGAAGGATGACAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCA 2083263
Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072
|||| |||| || || || || || | ||| | | | | ||| ||| ||
Sbjct 2083264 TCTCCAAATCAGCTGGAGGGATTGGCGTGGCAGTCAGCTGCATTAGATCCACGGGGAGCT 2083323
Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132
||||| ||| ||||| ||| |||||||| |||||||| ||| | |||| | |||||
Sbjct 2083324 ACATCGCCGGCACCAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACA 2083383
Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192
|| | ||||| || || || ||||| || | || || | ||||| | || |
Sbjct 2083384 ACACAGCGCGTTATGTTGATCAGGGGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACC 2083443
Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252
| |||||||||||| || ||| | ||| | || ||| |||||| || || |
Sbjct 2083444 TGGAGCCCTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGG 2083503
Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
| | || | ||||| ||||| |||||||| || ||| | || ||||| || ||||| |
Sbjct 2083504 AGGAGCAGCGAGCCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGC 2083563
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372
| || ||||| ||| | |||| || | ||||| || || ||||| ||| |
Sbjct 2083564 GGGTGGAGAACAACGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATG 2083623
Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432
| || || | |||||||| | || | | || || | |||| | || |
Sbjct 2083624 AGTGCTGGGGGGAGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGA 2083683
Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492
| || || | ||| | |||| ||| || ||| | || ||| || || |
Sbjct 2083684 AGCGTGTGGTGAAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCG 2083743
Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552
| ||||| ||||| | | ||| || | |||| ||| |||||||||| | || |
Sbjct 2083744 GGACGCCGTACATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGG 2083803
Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612
| |||||| || || || ||||| || || |||||||| ||| |||||||
Sbjct 2083804 GCACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGG 2083863
Query 94613 TTGCTGTGTGTAACCTGGGCTC 94634
| || || || || |||| |||
Sbjct 2083864 TGGCGGTTTGCAATCTGGCCTC 2083885
Score = 131 bits (144), Expect = 2e-25
Identities = 224/318 (70%), Gaps = 8/318 (3%)
Strand=Plus/Plus
Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053
|||||||| | |||| |||| | |||| || ||| ||| |||| |||||| |||
Sbjct 2084230 AGGGCATTCTCCAGTACGACATGTGGGAGAAGACGCCAACGGACCTGTGGGACTGG-AAG 2084288
Query 95054 CT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCA 95110
|| || | | | ||| |||||| || |||| ||| ||||| || |||| |
Sbjct 2084289 CTGCTGAAGGAGAAGATCGC--CAAACATGGCGTGAGGAACAGCCTGCTGCTGTCCCCAA 2084346
Query 95111 TGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCT 95170
|||||||||||||||| || |||||||| |||||||||||||| |||| ||| |||
Sbjct 2084347 TGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACAA 2084406
Query 95171 CCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCC 95230
|||| | |||| | | ||||||||| | ||||| || | || ||||| ||||| |
Sbjct 2084407 GCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCAGATCGTCAACCCCCACCTGC 2084466
Query 95231 TACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC- 95289
| |||||||| ||| ||||| ||| || | |||||||| ||| | |||
Sbjct 2084467 TCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGAGATGAAGAACCAGCTGAT-CGCT 2084525
Query 95290 GCCAACGGCTCCGTCCAG 95307
||| |||||| |||||
Sbjct 2084526 AACAATGGCTCCATCCAG 2084543
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494701215737800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |