Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3478 161 1e-34 >seq3478 Length=3494213 Score = 161 bits (178), Expect = 1e-34 Identities = 591/922 (64%), Gaps = 10/922 (1%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||| | | ||||| |||||| ||||||||| || ||||| || ||||| |||||| Sbjct 2082969 TACAACTTCTTTGGCTTCAAGACTCTGGAGCGCTCCTACCTGCTAAAGATCAATGGCAAA 2083028 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| ||||| || |||| ||| | || || | || || ||||| || Sbjct 2083029 GTAGCTGAGCGTCCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGAT 2083088 Query 93838 ATGCCGAAT--GTTTTGCGGGCTTTCAGAGACATGCGG---GACAAGAGGTATACCATGG 93892 || |||| || | | | | || || ||| | || ||| ||| ||| | Sbjct 2083089 AT--CGAAGCAGTCATCGAGACCTACA---ACCTGCTGTCAGAGAAGTGGTTCACCCACG 2083143 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 || |||||||||| ||||| || || ||| ||| ||| |||| || |||||| Sbjct 2083144 CCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGC 2083203 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | | |||| ||| |||| || || | ||||| || ||| | || || || Sbjct 2083204 TCGCCATGAAGGATGACAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCA 2083263 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| |||| || || || || || | ||| | | | | ||| ||| || Sbjct 2083264 TCTCCAAATCAGCTGGAGGGATTGGCGTGGCAGTCAGCTGCATTAGATCCACGGGGAGCT 2083323 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 ||||| ||| ||||| ||| |||||||| |||||||| ||| | |||| | ||||| Sbjct 2083324 ACATCGCCGGCACCAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACA 2083383 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || | ||||| || || || ||||| || | || || | ||||| | || | Sbjct 2083384 ACACAGCGCGTTATGTTGATCAGGGGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACC 2083443 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | |||||||||||| || ||| | ||| | || ||| |||||| || || | Sbjct 2083444 TGGAGCCCTGGCACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGG 2083503 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | | || | ||||| ||||| |||||||| || ||| | || ||||| || ||||| | Sbjct 2083504 AGGAGCAGCGAGCCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGC 2083563 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGTCCG 94372 | || ||||| ||| | |||| || | ||||| || || ||||| ||| | Sbjct 2083564 GGGTGGAGAACAACGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATG 2083623 Query 94373 ACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGCCA 94432 | || || | |||||||| | || | | || || | |||| | || | Sbjct 2083624 AGTGCTGGGGGGAGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGA 2083683 Query 94433 GGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGG 94492 | || || | ||| | |||| ||| || ||| | || ||| || || | Sbjct 2083684 AGCGTGTGGTGAAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCG 2083743 Query 94493 GTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCG 94552 | ||||| ||||| | | ||| || | |||| ||| |||||||||| | || | Sbjct 2083744 GGACGCCGTACATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGG 2083803 Query 94553 GGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGA 94612 | |||||| || || || ||||| || || |||||||| ||| ||||||| Sbjct 2083804 GCACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGG 2083863 Query 94613 TTGCTGTGTGTAACCTGGGCTC 94634 | || || || || |||| ||| Sbjct 2083864 TGGCGGTTTGCAATCTGGCCTC 2083885 Score = 131 bits (144), Expect = 2e-25 Identities = 224/318 (70%), Gaps = 8/318 (3%) Strand=Plus/Plus Query 94994 AGGGCATTTTTCAGTTCGACCTCTGGGGTGTGAAGCCCTCGGGTCTGTACGACTGGGAAG 95053 |||||||| | |||| |||| | |||| || ||| ||| |||| |||||| ||| Sbjct 2084230 AGGGCATTCTCCAGTACGACATGTGGGAGAAGACGCCAACGGACCTGTGGGACTGG-AAG 2084288 Query 95054 CT-CT--ACGCGCTGATGTTATCAAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCA 95110 || || | | | ||| |||||| || |||| ||| ||||| || |||| | Sbjct 2084289 CTGCTGAAGGAGAAGATCGC--CAAACATGGCGTGAGGAACAGCCTGCTGCTGTCCCCAA 2084346 Query 95111 TGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCT 95170 |||||||||||||||| || |||||||| |||||||||||||| |||| ||| ||| Sbjct 2084347 TGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACAA 2084406 Query 95171 CCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCC 95230 |||| | |||| | | ||||||||| | ||||| || | || ||||| ||||| | Sbjct 2084407 GCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCAGATCGTCAACCCCCACCTGC 2084466 Query 95231 TACGGGACCTGACGTCTCTGGGTGTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGC- 95289 | |||||||| ||| ||||| ||| || | |||||||| ||| | ||| Sbjct 2084467 TCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGAGATGAAGAACCAGCTGAT-CGCT 2084525 Query 95290 GCCAACGGCTCCGTCCAG 95307 ||| |||||| ||||| Sbjct 2084526 AACAATGGCTCCATCCAG 2084543 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494701215737800