Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq3478 163 3e-35 seq3522 82.4 8e-11 >seq3478 Length=3494213 Score = 163 bits (180), Expect = 3e-35 Identities = 925/1467 (63%), Gaps = 36/1467 (2%) Strand=Plus/Minus Query 153009 AGGTCATCGATCAAGTACTGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAA 153068 ||||| | || || || ||||||| | |||||||| |||| | ||| || | Sbjct 2084476 AGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTG 2084417 Query 153069 TATACATTGCTAGTGAAAGGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTT 153128 || | ||||| ||| | | || | ||| ||||| ||||| || || || || |||| Sbjct 2084416 TAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 2084357 Query 153129 GCGGTCGGCATGTACGCCACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCC 153188 || || ||||| | || || || |||| || ||| || || | ||| Sbjct 2084356 GCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCC 2084297 Query 153189 TTCAACGCCTGCCAATCCCACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAAC 153248 |||| | || ||| |||||||| ||| || ||| | ||||||||||||||| | Sbjct 2084296 TTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGA 2084237 Query 153249 ACTCCTCGACTGGCGGGACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTG-GGCCAG 153307 | || ||| | || ||| | |||| ||| ||||| || | |||||| Sbjct 2084236 ATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGA-GCTCGGCGGCCAG 2084178 Query 153308 TTCGCAGCTAGCCTCGAGCGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAAC 153367 |||||||| || || | ||| |||| || || || || ||| || | ||||| | Sbjct 2084177 CTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAG 2084118 Query 153368 GGCCGCTTCTTCGCTCTCGTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTG 153427 || || ||| || | || |||| || | || || || |||| ||||| Sbjct 2084117 TTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAAGCATCAGCCAATCCCTG 2084058 Query 153428 GATACCGACGCCGATGGGTCGATGCTTCTCGTTGCTGCGCCTCGCGCTCGCTATGGGATA 153487 || |||| || || || | || | ||| | ||| || | | || || Sbjct 2084057 GACCCCGATTCCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTA 2083998 Query 153488 GTGATTGCGATCGATAATTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAG 153547 || ||| ||||||| ||||| | ||| | || | ||||| || | | | Sbjct 2083997 GTAGTTGATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCCAA 2083938 Query 153548 TTTCTCGAAATCATAGGTCATTTCGTCGACG-CGTACGCATCGATTCACGGCAATAGACG 153606 ||| | || ||||| ||| || | | ||||| || || | || | ||| | Sbjct 2083937 TTTTTTAAAGTCATAAGTCCGCTCAGGGGTGACGTAC--ATG--TTGAGAGCGACAGAGG 2083882 Query 153607 CCAGATTACAGACGGCCGTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGT 153666 ||||||| || || ||| ||| || | |||||| ||||| || | |||||||| Sbjct 2083881 CCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGT 2083822 Query 153667 TGCTGCATTTTATGACGCCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGA 153726 ||||||| || ||| ||||| ||| ||||| ||||| || | ||||| || |||||| Sbjct 2083821 TGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGT 2083762 Query 153727 AGAGCATGTACGGTCCGCCGGTCTCGACTTGCGTTTCGACGAT---AAACCTATGCAGGT 153783 ||| ||||||||| ||||| || |||| |||| ||| | ||| || || | Sbjct 2083761 AGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACC-AT--AGCT 2083705 Query 153784 CCTGCGC--TC-GCACCCGCTGCCGATAGCGGCCCTCGCTCTCGTATCGCTCGTACAGTC 153840 ||| || || ||| |||| | | ||||| |||| |||| ||| ||| Sbjct 2083704 GCTGAGCCTTCACCACACGCTTC---ACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTT 2083648 Query 153841 GCTCAAACTCGTCGCCGTAGCAGTCGGCGAGGCCGGGACACTGATGCGGACACATCAGCG 153900 |||||||| || || |||| || | || ||||| || | |||||||||||| | Sbjct 2083647 CTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGG 2083588 Query 153901 ACCACATATCGTCGGCGTTGACGCGTCGCATGAACAGATCCGGCACCCAGAGCGCGTACA 153960 |||| |||| | | || || |||||| || || || | ||| || ||||| | Sbjct 2083587 ACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGA 2083528 Query 153961 TGAGGTCGC--GCGCCTTGCAATCCTCCGCGCCCATGTTGCGTTTCAGATTGAGCACGCT 154018 ||||| | || | ||| |||||| ||| |||| ||||| | || | | Sbjct 2083527 ACAGGTCCCTGGCTCGCTGC--TCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTC 2083470 Query 154019 ATAGATGTCGGCGTGCCAGGGTTCAATGTAGACGGCCAGGGCACC---TTTACGCTTTCC 154075 | | | ||| ||||||||| || | ||| | ||| | ||| || | | || || Sbjct 2083469 AAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTGTTGCC 2083410 Query 154076 GCCCTGATCGACGTGGCGCACCATATTGTTGAAGACGCGCACCATGGGTTCCAGGCCGCT 154135 |||||||| || | ||| | | |||||| | || | || ||| || | || ||| | Sbjct 2083409 CCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTT 2083350 Query 154136 TGCGGTGCCGTTGGTCGAATTGATCTTGCTGCCGCGGGCGCGCACTTGATGCACGTTA-- 154193 | ||||||||| ||| | ||| || || | | | ||||| | | Sbjct 2083349 GGAACAGCCGTTGGTGCCGGCGATGTAGCTCCC-----CGTGGATCTAATGCAGCTGACT 2083295 Query 154194 ---ACGCCAATGCCGCCGCCGTACTTTGATATGGCAGCGCAGTCGCCCAGCGTCCTGTAG 154250 |||||||| || || | | || || ||| ||||| | ||||| |||| Sbjct 2083294 GCCACGCCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTTAGCGTGTCGTAG 2083235 Query 154251 ATGCCGTCGATGCTATCGTCGCGGACGCCGAGCAAGAAACACGAACACATTTGCGGAATG 154310 || || |||||||| || || | | |||||| ||| || ||| ||||| || Sbjct 2083234 ATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTG 2083175 Query 154311 CGCGTTCCCGCCGAAAAGAGGGTGGGACTCGCGTGCGTAAACAGTTTTTGGCTCATCATG 154370 ||||| || |||||||| || ||||| || ||| || | || || | Sbjct 2083174 TTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGG 2083115 Query 154371 CGGTACGTTTCGATGGCGTCTTCGATATCATCGCCGTGAATGCCGAGCGCGACGCGCATG 154430 ||| || |||||| | |||||||||| ||||| || || | || || | |||| Sbjct 2083114 TTGTAGGTCTCGATGACTGCTTCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATG 2083055 Query 154431 AGCATGTGCTGCGGACGTTCGGCGACT 154457 ||||||||||||||||| || || ||| Sbjct 2083054 AGCATGTGCTGCGGACGCTCAGCTACT 2083028 >seq3522 Length=4083170 Score = 82.4 bits (90), Expect = 8e-11 Identities = 135/195 (69%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| || ||||||||||| | || || || || || || || || | | Sbjct 3190502 GACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCA 3190443 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTGTTTTAAT 138540 |||| || | ||| ||||| || || || ||||| ||||| |||||| || | Sbjct 3190442 AAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCTTCACG 3190383 Query 138541 TGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 138600 | || | ||||||| | | ||| ||||| | || | || || ||||| || ||||| Sbjct 3190382 TTCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGCGTTTTC 3190323 Query 138601 ACAAAAATCTGCATG 138615 ||||| ||||||||| Sbjct 3190322 ACAAAGATCTGCATG 3190308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496240347339600