Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 127 2e-24
seq3522 96.9 3e-15
>seq3478
Length=3494213
Score = 127 bits (140), Expect = 2e-24
Identities = 483/741 (65%), Gaps = 34/741 (5%)
Strand=Plus/Minus
Query 146063 GGTTGACCACCTGAAACTCGCCGGCGAGAACGCGCCTCAGATACACGTTGCTGGTGAACG 146122
||||||| | ||||||||| || | ||| || || | || | |||||| ||| | |
Sbjct 2084457 GGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGG 2084398
Query 146123 GCTCGAACGACTCGTTGTTACCGAGTATCTGCGCCGTCGTAGCGGTAGGCATGTACGCCA 146182
||||| ||||||||||| || || ||||| || || | || || ||||| | ||
Sbjct 2084397 CCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACA 2084338
Query 146183 CCAGCAAAGAGTTTCTCACGCCGTGTCTTTGAATCTTTTCCC---GTAGTTTGGACCAAT 146239
||||| ||| |||||||| ||| | ||||| ||| | || || ||| |
Sbjct 2084337 GCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTT---CCAGT 2084281
Query 146240 TCCACAAATGATCCGTGGGATAGATATTGTAGTTGTCGTAATGCATAGTGCCGCGGAACA 146299
||||| | ||||| || | | | ||||||| || | | |||| ||
Sbjct 2084280 CCCACA---GGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCA 2084224
Query 146300 GGGGGCTATTCT-CGTACGATTCATAAGGACCGTCGATCTT-GGCCAGTTCGCAGCTAGC 146357
|| | | || |||||| ||||| | ||| | || |||||| |||||||| ||
Sbjct 2084223 CCGG-CGAGCCTTCGTACGTCTCATAGGTGCCGA-GCTCGGCGGCCAGCTCGCAGCTCGC 2084166
Query 146358 TTCCAGAGCCGAAAAGTATATGGTCTCCGCGATCATGTAGTTGACGCTCCTG-GCCTCCT 146416
||||| ||| | | | || || ||||| |||| | ||||| || || |||||
Sbjct 2084165 TTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATGTTGA-GCAGTTGAGCCTCGG 2084107
Query 146417 CGCTGTCGTAGGGGATATCG-AGAAGCACAAAGGCGTCGGCGAGACCCTGTATCCCGACA 146475
||| || |||| ||| || | ||| | || || || || | ||||| | |||||
Sbjct 2084106 GGCTTTCAAAGGG-ATAACGCATAAGGATGAAAGCATCAGCCAATCCCTGGACCCCGATT 2084048
Query 146476 CCAACGGGGCGGTGTTTCTTGTTA---CTGTTCGCAGCGCCCGCAGTGGGATAGTGGTTG 146532
|| | || | ||| | |||| || | || | || | | | |||| ||||
Sbjct 2084047 CCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGG---TAGTAGTTG 2083991
Query 146533 CTGTCGATGATCTTGTTGAGATTACGCACGACAATTTTCGTCAAACGATTCAGCAGGACA 146592
||||||| | |||||| | || | || | | ||| |||| ||| | || |
Sbjct 2083990 ATGTCGATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACG-GATGC--CA----A 2083938
Query 146593 TAGTCAAATGTTTTAGTT----TTAACGTTGACGCACTTGTTGACGGCGATAGAGGCCAA 146648
| | || || || | | | | ||||| || |||||| |||| ||||||||
Sbjct 2083937 TTTTTTAAAGTCATAAGTCCGCTCAGGGGTGACGTACATGTTGAGAGCGACAGAGGCCAG 2083878
Query 146649 GTTACATACGGCAGTCTCGTCCTTGTCGCAATACTGCACAATCTCGGCGCAGAGGTTGCT 146708
|| || || || |||||||||| |||| || || || | ||||||||||||
Sbjct 2083877 ATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCT 2083818
Query 146709 GCACTTGATGATGCCCAAAtttttttGGTTACTAAACTTGTTGCAGGGGTCCTTGTAGAG 146768
|||||||||| |||||| ||| | ||||| || | ||||||||| || |||||||
Sbjct 2083817 GCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGAC 2083758
Query 146769 CATGTACGGTCCCCCGGTTTC 146789
||||||||| |||||||||
Sbjct 2083757 CATGTACGGCGTCCCGGTTTC 2083737
>seq3522
Length=4083170
Score = 96.9 bits (106), Expect = 3e-15
Identities = 140/198 (71%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | ||||| ||| || ||||| || |||
Sbjct 3219827 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3219768
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| ||||| || ||||||||||| ||| |||||| ||||
Sbjct 3219767 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTG 3219708
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || |||| || | || || || || || |||
Sbjct 3219707 ACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTT 3219648
Query 127097 TTTACAAAAATCTGCATG 127114
|| ||||| |||||||||
Sbjct 3219647 TTCACAAAGATCTGCATG 3219630
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | ||||| ||| || ||||| || |||
Sbjct 3190961 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3190902
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| ||||| || ||||||||||| ||| |||||| ||||
Sbjct 3190901 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTG 3190842
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | || ||||| || || ||
Sbjct 3190841 ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 3190782
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 3190781 TTCACGAAGATCTGCATG 3190764
Score = 91.5 bits (100), Expect = 1e-13
Identities = 139/198 (70%), Gaps = 0/198 (0%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| || || || ||||| || | ||||| ||| || ||||| || |||
Sbjct 3191189 GTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCA 3191130
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| |||||| | |||||| ||||| || ||||||||||| ||| |||||| ||||
Sbjct 3191129 GCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTG 3191070
Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096
| | || | |||||| | ||| || || | ||| | || ||||| || || ||
Sbjct 3191069 ACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTC 3191010
Query 127097 TTTACAAAAATCTGCATG 127114
|| || || |||||||||
Sbjct 3191009 TTCACGAAGATCTGCATG 3190992
Score = 91.5 bits (100), Expect = 1e-13
Identities = 168/244 (69%), Gaps = 2/244 (1%)
Strand=Plus/Minus
Query 126871 CATTTACTATACTGCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTG 126930
||||| || |||||| ||||| | | |||| || | || | || ||||| || ||
Sbjct 3191689 CATTT-CTTTACTGC-CCACCCCTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTG 3191632
Query 126931 AATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCG 126990
|| ||||| || | ||||| ||| || ||||| || ||||| |||||| |
Sbjct 3191631 GATGTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCT 3191572
Query 126991 CTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGT 127050
|||||| ||||| || ||||||||||| ||| ||| || ||||| | || | |||
Sbjct 3191571 CTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGT 3191512
Query 127051 GTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTG 127110
||| | ||| || || | ||| | || ||||| || || || || || || |||||
Sbjct 3191511 GTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTG 3191452
Query 127111 CATG 127114
||||
Sbjct 3191451 CATG 3191448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475479669933200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |