Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq3478 111 1e-19 >seq3478 Length=3494213 Score = 111 bits (122), Expect = 1e-19 Identities = 457/715 (64%), Gaps = 13/715 (2%) Strand=Plus/Plus Query 123606 GAAACCGGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGC 123665 |||||||| |||||||||||| |||||||||| |||||||||||||| | ||| ||| Sbjct 2083737 GAAACCGGGACGCCGTACATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAG 2083796 Query 123666 AACTTGGGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATAC---AGCGAT 123722 || |||| || || || || || || || ||| | ||||| |||| ||| ||| | Sbjct 2083797 AATCTGGGCACCATCAAGTGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAG 2083856 Query 123723 GCCGATCAAGTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAATCGTTGCGTCGAAAAC 123782 | || | ||||| || || ||| |||| || | | || | |||| Sbjct 2083857 GACG---AGGTGGCGGTTTGCAATCTGGCCTCTGTCGCTCTCAACATGTACGTCACCCCT 2083913 Query 123783 G-GCG--CTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTG 123839 | ||| ||| | | || ||| | | | | || ||| | || | ||| ||| Sbjct 2083914 GAGCGGACTTATGACTTTAAAAAATTGGCATCCGTGACCAAAGTAATTGTCAGGAACTTG 2083973 Query 123840 AACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAA 123899 ||||| ||||||| | || | || || |||| ||||| | ||| || || Sbjct 2083974 AACAAGGTTATCGACATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGC 2084033 Query 123900 CACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATG 123959 ||||| ||| | ||| | || | || || ||||| || || || | | |||| Sbjct 2084034 CACAGGCCGATAGGAATCGGGGTCCAGGGATTGGCTGATGCTTTCATCCTTATGCGTTAT 2084093 Query 123960 CCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTAC 124019 || | |||||| ||| || | |||| || | || || || || || ||||| Sbjct 2084094 CCCTTTGAAAGCCCCGAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTAT 2084153 Query 124020 GGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCG 124079 | ||||||||| ||||||||||| || || | |||| | || || | |||| Sbjct 2084154 GCCGCTTTGGAAGCGAGCTGCGAGCTGGCCGCCGAGCTCGGCACCTATGAGACGTACGAA 2084213 Query 124080 GGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAAT 124139 ||| |||| ||| || ||| | ||||||||||||||| | || || || | Sbjct 2084214 GGCTCGCCGGTGAGTAAGGGCATTCTCCAGTACGACATGTGGGAGAAGACGCCAACGGAC 2084273 Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATATCG--ACGCACGGTTTGCGTAACTCGC 124197 |||||||||||| | | || | | | |||| | || || || | ||| | Sbjct 2084274 CTGTGGGACTGGAAGCTGCTGAAGGA--GAAGATCGCCAAACATGGCGTGAGGAACAGCC 2084331 Query 124198 TGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCT 124257 || || || | ||||| ||||| |||| || || || | || |||||||| ||| Sbjct 2084332 TGCTGCTGTCCCCAATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCA 2084391 Query 124258 TCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCA 124312 ||||| | | ||| | ||| | ||| || || ||| | | || || ||||| Sbjct 2084392 TCGAGGCCTACACAAGCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCA 2084446 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451983114107800