Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_013668.3
Length=248526
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 167 4e-36
seq1157 89.7 8e-13
>seq3478
Length=3494213
Score = 167 bits (184), Expect = 4e-36
Identities = 347/509 (68%), Gaps = 6/509 (1%)
Strand=Plus/Minus
Query 204103 GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAAC-C 204161
||| ||||| |||| || ||||| || || ||||||| ||||| |||| | |
Sbjct 2084540 GATGGAGCCATTGTTAGCGATCAGCTGGTTCTTCATCTCCTCATTCCACAGGCCCCTCTC 2084481
Query 204162 TGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTC 204221
|| |||| || | |||||||||||||| ||||||||| || || || ||||||| |
Sbjct 2084480 TG-TCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGC 2084422
Query 204222 GGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGG 204281
||||| | | |||| | ||| | | |||| | |||||||||||| | ||||| ||||
Sbjct 2084421 GGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGG 2084362
Query 204282 TGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCC 204341
|| |||||||||||| || | ||| |||||| ||| | ||| || | ||| || |
Sbjct 2084361 TGGAGGCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCT 2084302
Query 204342 TGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACT 204401
| |||||| ||||||| || | | || || ||||||||||| |||
Sbjct 2084301 TCTCCTTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACT 2084242
Query 204402 GAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAG-GCTGATCCTCTTCT 204460
| | ||||| | ||| || || ||| | ||||||| ||| | || || ||| |
Sbjct 2084241 GGAGAATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGA-GCTCGGCG 2084183
Query 204461 GCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTT 204520
||||||| ||| || ||| ||| ||| ||||| |||||||||||||| | | ||
Sbjct 2084182 GCCAGCTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATG-TT 2084124
Query 204521 AATCTGGCG-GCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCAA 204579
| | | | ||||| | | ||||| | || || | | || | || |||||
Sbjct 2084123 GAGCAGTTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAAGCATCAGCCAA 2084064
Query 204580 GCCCTGCACTCCGATTCCCAACGGTCTGT 204608
||||| || |||||||| | ||| ||||
Sbjct 2084063 TCCCTGGACCCCGATTCCTATCGGCCTGT 2084035
>seq1157
Length=2784775
Score = 89.7 bits (98), Expect = 8e-13
Identities = 108/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Minus
Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973
|| ||| || || | ||||||| | ||||| | ||| || || || ||||||||
Sbjct 2751067 CTTCCAGCCATAGAAGTGCATGCTACTAAGTTTTCCATAGTTTGGCTCAGCAATGTGAAT 2751008
Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGT 204033
||| || |||||||||||||| ||| | | | |||||||| ||||| |||| | ||
Sbjct 2751007 GTTAAGCGACTGGCTTTGGTCAATGTATGCACCACGATCTGCTGCCATCTTGAGGACCGT 2750948
Query 204034 CTTCTGCGAAATCTCCCACACCGTCTT 204060
|||||| || || |||||||| || ||
Sbjct 2750947 CTTCTGGGAGATTTCCCACACAGTTTT 2750921
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 795119865290800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |