Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq3478 167 4e-36 seq1157 89.7 8e-13 >seq3478 Length=3494213 Score = 167 bits (184), Expect = 4e-36 Identities = 347/509 (68%), Gaps = 6/509 (1%) Strand=Plus/Minus Query 204103 GATCGAGCCGTTGTCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAAC-C 204161 ||| ||||| |||| || ||||| || || ||||||| ||||| |||| | | Sbjct 2084540 GATGGAGCCATTGTTAGCGATCAGCTGGTTCTTCATCTCCTCATTCCACAGGCCCCTCTC 2084481 Query 204162 TGATCAGCTCCCGCACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTC 204221 || |||| || | |||||||||||||| ||||||||| || || || ||||||| | Sbjct 2084480 TG-TCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGC 2084422 Query 204222 GGGTGAACAGGTTGTTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGG 204281 ||||| | | |||| | ||| | | |||| | |||||||||||| | ||||| |||| Sbjct 2084421 GGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGG 2084362 Query 204282 TGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCC 204341 || |||||||||||| || | ||| |||||| ||| | ||| || | ||| || | Sbjct 2084361 TGGAGGCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCT 2084302 Query 204342 TGCGCTTCAGAGAGGTCCAGTCGTGCATCGCACTGGGTTTCACGCCCCACATGTCGAACT 204401 | |||||| ||||||| || | | || || ||||||||||| ||| Sbjct 2084301 TCTCCTTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACT 2084242 Query 204402 GAAAGATGCCTTGACTGACTGGGCTGCCCTTGTACGTCGGATAAG-GCTGATCCTCTTCT 204460 | | ||||| | ||| || || ||| | ||||||| ||| | || || ||| | Sbjct 2084241 GGAGAATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGA-GCTCGGCG 2084183 Query 204461 GCCAGCTTGCACGAGGCGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTT 204520 ||||||| ||| || ||| ||| ||| ||||| |||||||||||||| | | || Sbjct 2084182 GCCAGCTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATG-TT 2084124 Query 204521 AATCTGGCG-GCCTCCGTTCCGTCAAACGCCAGACCCAGCATGGCAAACACGTCCGCCAA 204579 | | | | ||||| | | ||||| | || || | | || | || ||||| Sbjct 2084123 GAGCAGTTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAAGCATCAGCCAA 2084064 Query 204580 GCCCTGCACTCCGATTCCCAACGGTCTGT 204608 ||||| || |||||||| | ||| |||| Sbjct 2084063 TCCCTGGACCCCGATTCCTATCGGCCTGT 2084035 >seq1157 Length=2784775 Score = 89.7 bits (98), Expect = 8e-13 Identities = 108/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 203914 CTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCGGCCATGTGAAT 203973 || ||| || || | ||||||| | ||||| | ||| || || || |||||||| Sbjct 2751067 CTTCCAGCCATAGAAGTGCATGCTACTAAGTTTTCCATAGTTTGGCTCAGCAATGTGAAT 2751008 Query 203974 GTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGT 204033 ||| || |||||||||||||| ||| | | | |||||||| ||||| |||| | || Sbjct 2751007 GTTAAGCGACTGGCTTTGGTCAATGTATGCACCACGATCTGCTGCCATCTTGAGGACCGT 2750948 Query 204034 CTTCTGCGAAATCTCCCACACCGTCTT 204060 |||||| || || |||||||| || || Sbjct 2750947 CTTCTGGGAGATTTCCCACACAGTTTT 2750921 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795119865290800