Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq3522 149 1e-30 >seq3522 Length=4083170 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3190521 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3190462 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | ||||||||| || ||| ||||| || Sbjct 3190461 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC 3190402 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||||||| |||| |||||| | | || || || | ||||| || Sbjct 3190401 CTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGT 3190342 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| ||||||||||| || || Sbjct 3190341 CTTGCCAGTGAGCGTTTTCACAAAGATCTG 3190312 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3190749 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3190690 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| |||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 3190689 TTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTC 3190630 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||||||| ||| | ||||| ||| || || |||| ||||| || Sbjct 3190629 CTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGT 3190570 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || ||||| || || || Sbjct 3190569 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3190540 Score = 145 bits (160), Expect = 2e-29 Identities = 158/210 (75%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3191433 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3191374 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| |||||||| ||||| ||||| || | ||||||||| || ||| ||||| || Sbjct 3191373 TTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTC 3191314 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||||||| ||| | ||||| ||| || || |||| ||||| || Sbjct 3191313 CTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGT 3191254 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || ||||| || || || Sbjct 3191253 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3191224 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3190977 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3190918 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | ||||||||| || ||| || || || Sbjct 3190917 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3190858 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||| ||| || | |||||| | | || || |||| ||||| || Sbjct 3190857 CTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 3190798 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || ||||| || || || Sbjct 3190797 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3190768 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3191205 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3191146 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | ||||||||| || ||| || || || Sbjct 3191145 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3191086 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||| ||| || | |||||| | | || || |||| ||||| || Sbjct 3191085 CTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 3191026 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || ||||| || || || Sbjct 3191025 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3190996 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||| ||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3191661 CAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3191602 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | ||||||||| || ||| || || || Sbjct 3191601 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3191542 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| ||||| ||| ||| || | |||||| | | || || |||| ||||| || Sbjct 3191541 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 3191482 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| || ||||| || || || Sbjct 3191481 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3191452 Score = 131 bits (144), Expect = 4e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476 ||||||||||||||| || |||||||| |||| ||||||||||| | || | ||||| Sbjct 3219843 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3219784 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 |||||||||||| || || ||||| || | ||||||||| || ||| || || || Sbjct 3219783 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3219724 Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||| || || ||| || || | |||||| | | || || || | ||||| || Sbjct 3219723 CTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGT 3219664 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||| || || ||||||||||| || || Sbjct 3219663 CTTACCAGTTAGGGTTTTCACAAAGATCTG 3219634 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178867901963185