Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 149 1e-30
>seq3522
Length=4083170
Score = 149 bits (164), Expect = 1e-30
Identities = 159/210 (76%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 3190521 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3190462
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| ||||| ||
Sbjct 3190461 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTC 3190402
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| || || ||||||| |||| |||||| | | || || || | ||||| ||
Sbjct 3190401 CTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGT 3190342
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| ||||||||||| || ||
Sbjct 3190341 CTTGCCAGTGAGCGTTTTCACAAAGATCTG 3190312
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 3190749 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3190690
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| ||||| ||||| || | ||||||||| || ||| ||||| ||
Sbjct 3190689 TTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTC 3190630
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| || || ||||||| ||| | ||||| ||| || || |||| ||||| ||
Sbjct 3190629 CTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGT 3190570
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || ||||| || || ||
Sbjct 3190569 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3190540
Score = 145 bits (160), Expect = 2e-29
Identities = 158/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 3191433 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3191374
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
||| |||||||| ||||| ||||| || | ||||||||| || ||| ||||| ||
Sbjct 3191373 TTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTC 3191314
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| || || ||||||| ||| | ||||| ||| || || |||| ||||| ||
Sbjct 3191313 CTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGT 3191254
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || ||||| || || ||
Sbjct 3191253 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3191224
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 3190977 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3190918
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| || || ||
Sbjct 3190917 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3190858
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| || || ||| ||| || | |||||| | | || || |||| ||||| ||
Sbjct 3190857 CTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 3190798
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || ||||| || || ||
Sbjct 3190797 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3190768
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 3191205 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3191146
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| || || ||
Sbjct 3191145 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3191086
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| || || ||| ||| || | |||||| | | || || |||| ||||| ||
Sbjct 3191085 CTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 3191026
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || ||||| || || ||
Sbjct 3191025 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3190996
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||| ||||||||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 3191661 CAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3191602
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| || || ||
Sbjct 3191601 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3191542
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| ||||| ||| ||| || | |||||| | | || || |||| ||||| ||
Sbjct 3191541 CTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGT 3191482
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
||| || ||||| || ||||| || || ||
Sbjct 3191481 CTTGCCAGTGAGGGTCTTCACGAAGATCTG 3191452
Score = 131 bits (144), Expect = 4e-25
Identities = 155/210 (74%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 199417 CAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATC 199476
||||||||||||||| || |||||||| |||| ||||||||||| | || | |||||
Sbjct 3219843 CAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCATC 3219784
Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536
|||||||||||| || || ||||| || | ||||||||| || ||| || || ||
Sbjct 3219783 TTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATC 3219724
Query 199537 CTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596
||| || || ||| || || | |||||| | | || || || | ||||| ||
Sbjct 3219723 CTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGT 3219664
Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||| || || ||||||||||| || ||
Sbjct 3219663 CTTACCAGTTAGGGTTTTCACAAAGATCTG 3219634
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178867901963185
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |