Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq3522 147 2e-30 seq3467 111 2e-19 seq2977 95.1 1e-14 >seq3522 Length=4083170 Score = 147 bits (162), Expect = 2e-30 Identities = 174/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299 ||| ||||| || || || ||||||||||| ||||| ||||||||| | || || ||| | Sbjct 3190305 AAACATGCAGATCTTTGTGAAAACGCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCC 3190364 Query 38300 CACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 || ||||| | | | |||| | || | ||||||| ||||| || || |||||| | | Sbjct 3190365 CAGCGACACCATCGAGAACG-TGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCTG 3190423 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||| |||| || | || ||||| |||||||| || | ||||||||| |||| Sbjct 3190424 ACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACT 3190483 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||||||| ||||| | || || || | || |||||| | || || ||| Sbjct 3190484 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3190536 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| Sbjct 3190765 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3190824 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| || || ||||| |||||| ||||||| Sbjct 3190825 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCGACCA 3190883 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| |||||||| || | ||||||||| |||||||| Sbjct 3190884 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3190943 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || | || |||||| | || || ||| Sbjct 3190944 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3190992 Score = 140 bits (154), Expect = 3e-28 Identities = 170/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| Sbjct 3190993 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3191052 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | ||||||| || || ||||| |||||| ||||||| Sbjct 3191053 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCGACCA 3191111 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| |||||||| || | ||||||||| |||||||| Sbjct 3191112 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3191171 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || | || |||||| | || || ||| Sbjct 3191172 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3191220 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| ||| Sbjct 3191449 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3191508 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | | |||| | || | || |||| || || ||||| |||||| ||||||| Sbjct 3191509 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCA 3191567 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| |||||||| || | ||||||||| |||||||| Sbjct 3191568 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3191627 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470 |||||| ||||| | || || || | || |||||| | || || || Sbjct 3191628 CATCCAGAAGGAGTCCACCCTCCACCTTGTTCTGCGTCTCAGGGGTGG 3191675 Score = 134 bits (148), Expect = 1e-26 Identities = 170/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298 |||| ||||| || || || ||||| || || || || |||||||| |||| || ||| Sbjct 3219626 AAAACATGCAGATCTTTGTGAAAACCCTAACTGGTAAGACCATCACTCTCGAGGTTGAGC 3219685 Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358 ||| |||| | | | | | || | ||||||| || || ||||| |||||| ||| Sbjct 3219686 CCAGTGACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCG 3219745 Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418 |||| ||| |||| || | || ||||| |||||||| || | ||||||||| |||| Sbjct 3219746 ACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACT 3219805 Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||||||| ||||| | || || || | || |||||| | || || |||| Sbjct 3219806 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGCC 3219859 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | | Sbjct 3190537 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3190596 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| | || | ||||||| ||||| || || |||||| ||||||| Sbjct 3190597 GACACAATTGAAAACG-TGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCA 3190655 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| ||||| || || | ||||||||| |||||||| Sbjct 3190656 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAA 3190715 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || | || |||||| | || || ||| Sbjct 3190716 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3190764 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | | Sbjct 3191221 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3191280 Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 |||| | | ||||| | || | ||||||| ||||| || || |||||| ||||||| Sbjct 3191281 GACACAATTGAAAACG-TGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCA 3191339 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||| |||| || | || ||||| ||||| || || | ||||||||| |||||||| Sbjct 3191340 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAA 3191399 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471 |||||| ||||| | || || || | || |||||| | || || ||| Sbjct 3191400 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3191448 >seq3467 Length=3272559 Score = 111 bits (122), Expect = 2e-19 Identities = 101/126 (80%), Gaps = 1/126 (1%) Strand=Plus/Minus Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333 |||| ||||| || || ||||||||||||||||||||||| || ||||||| |||||| Sbjct 2317671 GCTC-ACCAGGTTCTCATTGACGATGCCGTCGCTGGCGGCAAAGAAGGCCAACACGTGGG 2317613 Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393 |||||| | |||||| | ||| |||| | ||||||| || |||||||||||| | Sbjct 2317612 AGATGAAGTAGCGCTCTTCGTCCTTCATGGCATCCCAGTGCTGCAGGTCCTTGGACAGAT 2317553 Query 133394 CCACCT 133399 |||||| Sbjct 2317552 CCACCT 2317547 Score = 111 bits (122), Expect = 2e-19 Identities = 101/126 (80%), Gaps = 1/126 (1%) Strand=Plus/Plus Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333 |||| ||||| || || ||||||||||||||||||||||| || ||||||| |||||| Sbjct 2329279 GCTC-ACCAGGTTCTCATTGACGATGCCGTCGCTGGCGGCAAAGAAGGCCAACACGTGGG 2329337 Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393 |||||| | |||||| | ||| |||| | ||||||| || |||||||||||| | Sbjct 2329338 AGATGAAGTAGCGCTCTTCGTCCTTCATGGCATCCCAGTGCTGCAGGTCCTTGGACAGAT 2329397 Query 133394 CCACCT 133399 |||||| Sbjct 2329398 CCACCT 2329403 Score = 105 bits (116), Expect = 7e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 ||||||| ||| ||||| |||||| ||| |||| ||||||||| ||||| | || | Sbjct 2318294 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 2318235 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || ||||||||||| ||||| ||||||| ||||| || || || || | Sbjct 2318234 TCAGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGG 2318175 Query 133037 CCACCAGGCGCTCGCC 133052 |||||| |||||| || Sbjct 2318174 CCACCACGCGCTCTCC 2318159 Score = 105 bits (116), Expect = 7e-18 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Plus Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976 ||||||| ||| ||||| |||||| ||| |||| ||||||||| ||||| | || | Sbjct 2328656 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 2328715 Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036 | ||||| || ||||||||||| ||||| ||||||| ||||| || || || || | Sbjct 2328716 TCAGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGG 2328775 Query 133037 CCACCAGGCGCTCGCC 133052 |||||| |||||| || Sbjct 2328776 CCACCACGCGCTCTCC 2328791 >seq2977 Length=7416971 Score = 95.1 bits (104), Expect = 1e-14 Identities = 90/115 (78%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCG 133453 |||||||||| |||||||| || || |||| ||| | ||||||||| |||| ||||| Sbjct 6484061 CCACCTCCTCCACGGTCCAGAAAGAGGCCTGGGCCTGTTTGTACATCTTCCAGATGTCTC 6484120 Query 133454 AATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508 || || ||||||||||| |||||||| | |||||| || || | ||| || || Sbjct 6484121 GGTACTGGATGGGAAAAATGACAAACCGCCTGGGGTTCTCTCGGAGCAGAGGTTC 6484175 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500150573571200