Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 147 2e-30
seq3467 111 2e-19
seq2977 95.1 1e-14
>seq3522
Length=4083170
Score = 147 bits (162), Expect = 2e-30
Identities = 174/233 (75%), Gaps = 2/233 (1%)
Strand=Plus/Plus
Query 38240 AAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGC 38299
||| ||||| || || || ||||||||||| ||||| ||||||||| | || || ||| |
Sbjct 3190305 AAACATGCAGATCTTTGTGAAAACGCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCC 3190364
Query 38300 CACCGACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
|| ||||| | | | |||| | || | ||||||| ||||| || || |||||| | |
Sbjct 3190365 CAGCGACACCATCGAGAACG-TGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCTG 3190423
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||| |||| || | || ||||| |||||||| || | ||||||||| ||||
Sbjct 3190424 ACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACT 3190483
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||||||| ||||| | || || || | || |||||| | || || |||
Sbjct 3190484 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3190536
Score = 140 bits (154), Expect = 3e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| |||
Sbjct 3190765 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3190824
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| || || ||||| |||||| |||||||
Sbjct 3190825 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCGACCA 3190883
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| |||||||| || | ||||||||| ||||||||
Sbjct 3190884 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3190943
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || || || | || |||||| | || || |||
Sbjct 3190944 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3190992
Score = 140 bits (154), Expect = 3e-28
Identities = 170/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| |||
Sbjct 3190993 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3191052
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | ||||||| || || ||||| |||||| |||||||
Sbjct 3191053 GACACCATTGAGAACG-TCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCGACCA 3191111
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| |||||||| || | ||||||||| ||||||||
Sbjct 3191112 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3191171
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || || || | || |||||| | || || |||
Sbjct 3191172 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3191220
Score = 134 bits (148), Expect = 1e-26
Identities = 168/228 (74%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| |||
Sbjct 3191449 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3191508
Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | | |||| | || | || |||| || || ||||| |||||| |||||||
Sbjct 3191509 GACACCATTGAGAACG-TCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCA 3191567
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| |||||||| || | ||||||||| ||||||||
Sbjct 3191568 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3191627
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
|||||| ||||| | || || || | || |||||| | || || ||
Sbjct 3191628 CATCCAGAAGGAGTCCACCCTCCACCTTGTTCTGCGTCTCAGGGGTGG 3191675
Score = 134 bits (148), Expect = 1e-26
Identities = 170/234 (73%), Gaps = 0/234 (0%)
Strand=Plus/Plus
Query 38239 AAAAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGG 38298
|||| ||||| || || || ||||| || || || || |||||||| |||| || |||
Sbjct 3219626 AAAACATGCAGATCTTTGTGAAAACCCTAACTGGTAAGACCATCACTCTCGAGGTTGAGC 3219685
Query 38299 CCACCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCG 38358
||| |||| | | | | | || | ||||||| || || ||||| |||||| |||
Sbjct 3219686 CCAGTGACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCG 3219745
Query 38359 ACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACT 38418
|||| ||| |||| || | || ||||| |||||||| || | ||||||||| ||||
Sbjct 3219746 ACCAGCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACT 3219805
Query 38419 ACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472
|||||||||| ||||| | || || || | || |||||| | || || ||||
Sbjct 3219806 ACAACATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGCC 3219859
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | |
Sbjct 3190537 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3190596
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | ||||| | || | ||||||| ||||| || || |||||| |||||||
Sbjct 3190597 GACACAATTGAAAACG-TGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCA 3190655
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| ||||| || || | ||||||||| ||||||||
Sbjct 3190656 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAA 3190715
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || || || | || |||||| | || || |||
Sbjct 3190716 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3190764
Score = 131 bits (144), Expect = 2e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || ||||| || || ||||| ||||| ||||||||| | || || ||| | |
Sbjct 3191221 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3191280
Query 38304 GACAGCGT-GCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362
|||| | | ||||| | || | ||||||| ||||| || || |||||| |||||||
Sbjct 3191281 GACACAATTGAAAACG-TGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCA 3191339
Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422
||| |||| || | || ||||| ||||| || || | ||||||||| ||||||||
Sbjct 3191340 GCAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAA 3191399
Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGC 38471
|||||| ||||| | || || || | || |||||| | || || |||
Sbjct 3191400 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCGTCTCAGGGGTGGC 3191448
>seq3467
Length=3272559
Score = 111 bits (122), Expect = 2e-19
Identities = 101/126 (80%), Gaps = 1/126 (1%)
Strand=Plus/Minus
Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333
|||| ||||| || || ||||||||||||||||||||||| || ||||||| ||||||
Sbjct 2317671 GCTC-ACCAGGTTCTCATTGACGATGCCGTCGCTGGCGGCAAAGAAGGCCAACACGTGGG 2317613
Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393
|||||| | |||||| | ||| |||| | ||||||| || |||||||||||| |
Sbjct 2317612 AGATGAAGTAGCGCTCTTCGTCCTTCATGGCATCCCAGTGCTGCAGGTCCTTGGACAGAT 2317553
Query 133394 CCACCT 133399
||||||
Sbjct 2317552 CCACCT 2317547
Score = 111 bits (122), Expect = 2e-19
Identities = 101/126 (80%), Gaps = 1/126 (1%)
Strand=Plus/Plus
Query 133274 GCTCGACCAGATTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCT 133333
|||| ||||| || || ||||||||||||||||||||||| || ||||||| ||||||
Sbjct 2329279 GCTC-ACCAGGTTCTCATTGACGATGCCGTCGCTGGCGGCAAAGAAGGCCAACACGTGGG 2329337
Query 133334 TGATGAAATGGCGCTCGTTGTCGTTCAAGCGCTCCCAGTCGCGCGTGTCCTTGGACAGGT 133393
|||||| | |||||| | ||| |||| | ||||||| || |||||||||||| |
Sbjct 2329338 AGATGAAGTAGCGCTCTTCGTCCTTCATGGCATCCCAGTGCTGCAGGTCCTTGGACAGAT 2329397
Query 133394 CCACCT 133399
||||||
Sbjct 2329398 CCACCT 2329403
Score = 105 bits (116), Expect = 7e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| ||| ||||| |||||| ||| |||| ||||||||| ||||| | || |
Sbjct 2318294 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 2318235
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| || ||||||||||| ||||| ||||||| ||||| || || || || |
Sbjct 2318234 TCAGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGG 2318175
Query 133037 CCACCAGGCGCTCGCC 133052
|||||| |||||| ||
Sbjct 2318174 CCACCACGCGCTCTCC 2318159
Score = 105 bits (116), Expect = 7e-18
Identities = 105/136 (77%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 132917 CCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTT 132976
||||||| ||| ||||| |||||| ||| |||| ||||||||| ||||| | || |
Sbjct 2328656 CCTCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCT 2328715
Query 132977 TGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAG 133036
| ||||| || ||||||||||| ||||| ||||||| ||||| || || || || |
Sbjct 2328716 TCAGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGG 2328775
Query 133037 CCACCAGGCGCTCGCC 133052
|||||| |||||| ||
Sbjct 2328776 CCACCACGCGCTCTCC 2328791
>seq2977
Length=7416971
Score = 95.1 bits (104), Expect = 1e-14
Identities = 90/115 (78%), Gaps = 0/115 (0%)
Strand=Plus/Plus
Query 133394 CCACCTCCTCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCG 133453
|||||||||| |||||||| || || |||| ||| | ||||||||| |||| |||||
Sbjct 6484061 CCACCTCCTCCACGGTCCAGAAAGAGGCCTGGGCCTGTTTGTACATCTTCCAGATGTCTC 6484120
Query 133454 AATATTGTATGGGAAAAATCACAAACCGGCGGGGGTTTTCGCGCAACAGCGGCTC 133508
|| || ||||||||||| |||||||| | |||||| || || | ||| || ||
Sbjct 6484121 GGTACTGGATGGGAAAAATGACAAACCGCCTGGGGTTCTCTCGGAGCAGAGGTTC 6484175
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500150573571200
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