Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3177 152 2e-31 >seq3177 Length=5359858 Score = 152 bits (168), Expect = 2e-31 Identities = 455/697 (65%), Gaps = 5/697 (1%) Strand=Plus/Plus Query 450910 AGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGG 450969 |||| | ||||| |||||||| || ||||||| ||| ||||| || |||| ||| |||| Sbjct 5196538 AGTATCCATTGGCATTGATCTGGGCACCACCTATTCTTGTGTTGGGGTTTTCCAGCATGG 5196597 Query 450970 AAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTT 451029 || || || || || || || || || || |||| ||||| | || ||| Sbjct 5196598 CAAAGTTGAGATCATTGCCAACGATCAGGGCAATAGAACCACTCCAAGCTATGTGGCTTT 5196657 Query 451030 TACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCA 451088 ||| || ||||||| ||| | || | ||||| || | | | | | | | || ||| Sbjct 5196658 TACCGACACAGAAAGGCTTATTGGAGATGCTGCCAAGAACCAAGTTGCAATGAACC-CCA 5196716 Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 | |||||| | | |||||| ||||| | ||||| | | || | |||| |||| Sbjct 5196717 ATAACACAATCTTTGATGCCAAACGGCTGATTGGAAGAAAGTTTAATGACCCAGTCGTAC 5196776 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208 | || | || ||| ||| | || | | | || ||||||||| | | | Sbjct 5196777 AGTCCGACATGAAGCTCTGGCCTTTCAAGGTGATTGACGATAATGGAAAGCCCAAAGTCC 5196836 Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268 | || | || ||||| || || || | || |||||| |||||||| || ||||| | Sbjct 5196837 AGGTGGAATACAAAGGGGAGACCAAGGCATTCTATCCTGAGGAAATTTCCTCCATGGTCC 5196896 Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328 | ||||||||| || | ||| || || | || || | | ||||| | Sbjct 5196897 TGGTTAAAATGAAGGAGATAGCTGAGGCCTACCTGGGACAAAGGGTGTCAAACGCAGTCA 5196956 Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388 | || || || ||||||||||| || | || | ||||| || || ||||| || | Sbjct 5196957 TCACAGTGCCAGCTTATTTCAACGACTCCCAGAGACAAGCTACCAAGGATGCTGGGGTGA 5197016 Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448 | |||| |||||||||| | || |||||||| || |||||||| || | ||||||| Sbjct 5197017 TCTCTGGACTAAATGTTCTGAGGATCATTAATGAGCCCACAGCAGCAGCCATTGCATATG 5197076 Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508 | || ||| || | |||||| |||| ||| | | | |||||| |||| |||| Sbjct 5197077 GCCT-GGATAA--AGGCAAAACAGGAGAACGCAATGTGCTGATCTTTGATCTTGGCGGAG 5197133 Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568 | || |||| ||| | || | ||||||| ||| | ||||| || || || || Sbjct 5197134 GCACCTTTGATGTGTCTATTCTGACCATTGAAGCTGGCATCTTTGAGGTCAAAGCCACTT 5197193 Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || || || || || || || || |||| || Sbjct 5197194 CAGGAGACACACACCTTGGTGGGGAGGACTTTGACAA 5197230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975628409113940