Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_014637.1
Length=617453
Score E
Sequences producing significant alignments: (Bits) Value
seq3177 152 2e-31
>seq3177
Length=5359858
Score = 152 bits (168), Expect = 2e-31
Identities = 455/697 (65%), Gaps = 5/697 (1%)
Strand=Plus/Plus
Query 450910 AGTAGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGG 450969
|||| | ||||| |||||||| || ||||||| ||| ||||| || |||| ||| ||||
Sbjct 5196538 AGTATCCATTGGCATTGATCTGGGCACCACCTATTCTTGTGTTGGGGTTTTCCAGCATGG 5196597
Query 450970 AAATGTAGAAATTATAGCAAATGACCAAGGATCACGAACTACTCCTTCATGGGTAAGTTT 451029
|| || || || || || || || || || |||| ||||| | || |||
Sbjct 5196598 CAAAGTTGAGATCATTGCCAACGATCAGGGCAATAGAACCACTCCAAGCTATGTGGCTTT 5196657
Query 451030 TACGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAA-ATCAATGGTAAATTCAAATGCCA 451088
||| || ||||||| ||| | || | ||||| || | | | | | | | || |||
Sbjct 5196658 TACCGACACAGAAAGGCTTATTGGAGATGCTGCCAAGAACCAAGTTGCAATGAACC-CCA 5196716
Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148
| |||||| | | |||||| ||||| | ||||| | | || | |||| ||||
Sbjct 5196717 ATAACACAATCTTTGATGCCAAACGGCTGATTGGAAGAAAGTTTAATGACCCAGTCGTAC 5196776
Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAAAGGAAAGCCCTATATTC 451208
| || | || ||| ||| | || | | | || ||||||||| | | |
Sbjct 5196777 AGTCCGACATGAAGCTCTGGCCTTTCAAGGTGATTGACGATAATGGAAAGCCCAAAGTCC 5196836
Query 451209 AAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTTC 451268
| || | || ||||| || || || | || |||||| |||||||| || ||||| |
Sbjct 5196837 AGGTGGAATACAAAGGGGAGACCAAGGCATTCTATCCTGAGGAAATTTCCTCCATGGTCC 5196896
Query 451269 TTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAA 451328
| ||||||||| || | ||| || || | || || | | ||||| |
Sbjct 5196897 TGGTTAAAATGAAGGAGATAGCTGAGGCCTACCTGGGACAAAGGGTGTCAAACGCAGTCA 5196956
Query 451329 TTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATA 451388
| || || || ||||||||||| || | || | ||||| || || ||||| || |
Sbjct 5196957 TCACAGTGCCAGCTTATTTCAACGACTCCCAGAGACAAGCTACCAAGGATGCTGGGGTGA 5197016
Query 451389 TTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATG 451448
| |||| |||||||||| | || |||||||| || |||||||| || | |||||||
Sbjct 5197017 TCTCTGGACTAAATGTTCTGAGGATCATTAATGAGCCCACAGCAGCAGCCATTGCATATG 5197076
Query 451449 GACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAG 451508
| || ||| || | |||||| |||| ||| | | | |||||| |||| ||||
Sbjct 5197077 GCCT-GGATAA--AGGCAAAACAGGAGAACGCAATGTGCTGATCTTTGATCTTGGCGGAG 5197133
Query 451509 GAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCA 451568
| || |||| ||| | || | ||||||| ||| | ||||| || || || ||
Sbjct 5197134 GCACCTTTGATGTGTCTATTCTGACCATTGAAGCTGGCATCTTTGAGGTCAAAGCCACTT 5197193
Query 451569 ATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605
|| || || || || || || || || |||| ||
Sbjct 5197194 CAGGAGACACACACCTTGGTGGGGAGGACTTTGACAA 5197230
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1975628409113940
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |