Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_014649.1
Length=1181549
Score E
Sequences producing significant alignments: (Bits) Value
seq3177 304 1e-76
seq303 93.3 3e-13
>seq3177
Length=5359858
Score = 304 bits (336), Expect = 1e-76
Identities = 955/1467 (65%), Gaps = 12/1467 (1%)
Strand=Plus/Minus
Query 517249 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 517308
||| || |||| | ||||| ||||| || |||||||| | |||||||| || || ||
Sbjct 5198005 TTTGTCCACGGCGGATACATTTAGAATGCCGTTGGCATCAATGTCAAATGTTACCTCTAT 5197946
Query 517309 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 517368
|| || || |||| |||| || ||||| ||| | | |||| | |||||| ||
Sbjct 5197945 CTGTGGAACACCTCGGGGAGCTGGAGGGATACCTGTGAGGTCAAATTTGCCCAGAAGGTT 5197886
Query 517369 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 517428
|| ||| || | || || || || || | || || || | | || ||
Sbjct 5197885 GTTGCATTTGGTCATGGCTCTCTCGCCTTCAAATACCTGAATCAATACACCTGGCTGGTT 5197826
Query 517429 ATCTGAATAAGTTGTAAATACTCTGGATTTT-TTACAAGGAATTGTTGTGTTTCTATCAA 517487
|||||| || || | || | |||| | | || || ||||| ||||||| | |
Sbjct 5197825 ATCTGAGTATGTGGAGAAGA-TCTGAGTCTGCTTTGTGGGGATTGTGGTGTTTCGCTTTA 5197767
Query 517488 TAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAA 517547
| | | ||||||| ||| ||||| ||||| | || ||||| || |||| |||||| |
Sbjct 5197766 TCAGAGGTGTCATAACACCGCCTGCGGTTTCAATGCCCAGAGACAGGGGAGCGACATCCA 5197707
Query 517548 CTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAG 517607
|| | | || ||| | || || || | || | || || |||||||| | |
Sbjct 5197706 GCAGCAGCAGATCTTGGACATTCTCTGAGGTGTCGCCCATGAGGATGGCTGCTTGGACTG 5197647
Query 517608 CAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGA 517667
| ||||| || || ||||||||||| || |||| | | || || | ||| ||||| |
Sbjct 5197646 CTGCACCGTAGGCTACAGCTTCATCTGGGTTAATGCTCTTGTTCAGGTCTTTGCCATTAA 5197587
Query 517668 AAAAATT-TGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACA 517726
| || | || |||| || | | || ||||| | | || || ||||| | |||
Sbjct 5197586 AGAAGTCCTGTAAGAGCTTCTGG-ATTTTGGGAATTCTTGTGGAGCCACCAACCAGGACA 5197528
Query 517727 ATTTCATGCA-CCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 517785
|||||||| | |||| ||||||||||| || | |||| | |||| ||||| || |
Sbjct 5197527 ATTTCATGAATCCTG-GATTTATCCAGCTTGGCATCCTGCAGGGCTTTCTCAACTGGGCC 5197469
Query 517786 AAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGAC 517845
||| | || || | ||||| || || || || || || || | | |
Sbjct 5197468 AAGTGTTCCCCTGAAAAGATCTGAGTTGAGCTCCTCAAAACGTGCCCTTGTGATGGAGGT 5197409
Query 517846 ATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGA 517905
| | |||||||||| || || | ||| || | ||||| | | ||||| || ||
Sbjct 5197408 GTAAAAATCAATTCCCTCAAAGAGAGAGTCGATCTCAATGCTTGCCTGAGTGCTGGAGGA 5197349
Query 517906 TAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTG 517965
|| | | || || | ||||| ||||| | | ||| | | ||| | || |||
Sbjct 5197348 TAAGGTCCTCTTTGCCCTCTCACAAGCTGTACGCAATCTCCTCACTGCTCT--CTTATTC 5197291
Query 517966 ATTCAAATCTGTTT--TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGA 518023
| ||| | || ||| |||||| || || || || ||| | | || | |
Sbjct 5197290 TGGCTAATGTCCTTCTTATGTTTTCTTTTAAATTCCTCTACAAAGTGCTTGACCATTTGG 5197231
Query 518024 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 518083
|| ||||| || || || || | | || | |||||| || ||| | || | || |
Sbjct 5197230 TTGTCAAAGTCCTCCCCACCAAGGTGTGTGTCTCCTGAAGTGGCTTTGACCTCAAAGATG 5197171
Query 518084 CCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGT 518143
||| |||||| | || || || |||||| ||| || || || | |||||| || ||
Sbjct 5197170 CCAGCTTCAATGGTCAGAATAGACACATCAAAGGTGCCTCCGCCAAGATCAAAGATCAGC 5197111
Query 518144 ACATTCATTTCTT-TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202
||||| |||| ||| ||| ||| ||| || ||||| |||| || || || || ||
Sbjct 5197110 ACATTGCGTTCTCCTGTTTTGCCTTT-ATCCAGGCCATATGCAATGGCTGCTGCTGTGGG 5197052
Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262
|||||||| || |||| |||||| || |||| || || ||||| || || |||||
Sbjct 5197051 CTCATTAATGATCCTCAGAACATTTAGTCCAGAGATCACCCCAGCATCCTTGGTAGCTTG 5196992
Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACC 518322
||| || || ||||| ||||| || || || || || || || | | || || ||
Sbjct 5196991 TCTCTGGGAGTCGTTGAAATAAGCTGGCACTGTGATGACTGCGTTTGACACCCTTTGTCC 5196932
Query 518323 AATATAAGCGCTTGCCGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGG 518382
| || || || | | ||||||||| | | ||| || ||||||| || ||
Sbjct 5196931 CAGGTAGGCCTCAGCTATCTCCTTCATTTTAACCAGGACCATGGAGGAAATTTCCTCAGG 5196872
Query 518383 GGAATATTGCTTGGATTCATTTTGATATGATACTTCAAAATATGGTTTATTACCAACATT 518442
| || ||||| || || ||| || | | | || || | | | |
Sbjct 5196871 ATAGAATGCCTTGGTCTCCCCTTTGTATTCCACCTGGACTTTGGGCTTTCCATTATCGTC 5196812
Query 518443 AATAACTTTAAATGGCCAGTATTTCATATCTGATTGAACACTTTGGTCATTAAAATCTCT 518502
||| || || || |||||| ||||| || || || || | |||||||||| | |||
Sbjct 5196811 AATCACCTTGAAAGGCCAGAGCTTCATGTCGGACTGTACGACTGGGTCATTAAACTTTCT 5196752
Query 518503 ACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTT 518562
||||| | ||||| |||||||| || || || | || || |||||| |||| | ||
Sbjct 5196751 TCCAATCAGCCGTTTGGCATCAAAGATTGTGTTATTGGGGTTCATTGCAACTTGGTTCTT 5196692
Query 518563 GGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCG 518622
||| ||||||||||| || |||||| || ||||| | ||||| |||||| || |
Sbjct 5196691 GGCAGCATCTCCAATAAGCCTTTCTGTGTCGGTAAAAGCCACATAGCTTGGAGTGGTTCT 5196632
Query 518623 ATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACT 518682
||| || ||||| || ||||| || |||||||| |||| || | || || ||||||
Sbjct 5196631 ATTGCCCTGATCGTTGGCAATGATCTCAACTTTGCCATGCTGGAAAACCCCAACACAAGA 5196572
Query 518683 AAAAGTTGTTCCTAAATCAATACCAAT 518709
| | || || || | |||||| |||||
Sbjct 5196571 ATAGGTGGTGCCCAGATCAATGCCAAT 5196545
>seq303
Length=4018286
Score = 93.3 bits (102), Expect = 3e-13
Identities = 110/149 (74%), Gaps = 0/149 (0%)
Strand=Plus/Minus
Query 518165 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 518224
||||| || || ||||| |||| |||||||| || || ||||| || || | | |||
Sbjct 506723 TTTTTGTCCAGGCCATAGGCAATGGCAGCAGCGGTGGGCTCATTGATGATACGAAGGACA 506664
Query 518225 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 518284
||||| |||| ||| | ||||||||||| ||||| || | || || ||||| || ||
Sbjct 506663 TTAAGCCCAGAAATGGTCCCTGCATCTTTGGTGGCCTGGCGCTGAGAGTCGTTGAAGTAG 506604
Query 518285 GCAGGAACAGTAATAACGGCATCAGTTAC 518313
||||| ||||| | ||| || |||||
Sbjct 506603 GCAGGCACAGTCACTACGACACTTGTTAC 506575
Score = 87.8 bits (96), Expect = 1e-11
Identities = 131/186 (70%), Gaps = 0/186 (0%)
Strand=Plus/Minus
Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582
|||| || || ||| |||| || | || |||| | ||||||||||| ||||||||
Sbjct 506088 CAAATATTGTGTTGTTTGGGTTCAAGGCCACTTGGTTCTTGGCTGCATCCCCAATCAGCC 506029
Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642
||||| || || |||| |||||| || || || | || || || ||||| ||||
Sbjct 506028 TCTCTGTGTCAGTGAATGCAACATAGCTGGGTGTAGTCCTGTTTCCCTGGTCATTGGCAA 505969
Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702
| ||||| ||||| |||| || | || |||||||| | || || || | ||||
Sbjct 505968 TGATTTCCACTTTGCCATGCTGAAAAACTCCTACACAGGAGTAGGTAGTGCCCAGGTCAA 505909
Query 518703 TACCAA 518708
||||||
Sbjct 505908 TACCAA 505903
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 3780645989189830
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |