Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_014766.1
Length=194022
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 136 5e-27
seq3467 87.8 2e-12
>seq3478
Length=3494213
Score = 136 bits (150), Expect = 5e-27
Identities = 935/1485 (63%), Gaps = 30/1485 (2%)
Strand=Plus/Plus
Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671
|| ||| ||||| ||||| |||| || | || ||||| ||| ||||| || | ||
Sbjct 2083041 CCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGATATCGAAGCAGTC 2083100
Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730
| ||||| ||| || | |||| | || ||||| |||||| | || ||||||||
Sbjct 2083101 ATCGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCGACCCTCTT 2083159
Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790
||| ||||| || || || || ||||||| || ||||| | || | ||||| ||
Sbjct 2083160 CAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 2083219
Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850
||| | || || |||| ||| || | | || |||| ||||| || | |||||
Sbjct 2083220 CAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGG 2083279
Query 111851 TGGTATCGGGATGCACATCCATGATG--TCAGAGCCAACAAGTCTCGTATTAGAGGTACA 111908
|| || || || || || | || | ||| ||| | || || ||
Sbjct 2083280 AGGGATTGGCGTGG-CAGTCA-GCTGCATTAGATCCACGGGGAGCTACATCGCCGGCACC 2083337
Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968
|| || || | || | | |||||| | | || | ||| ||||||||| |||
Sbjct 2083338 AACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTAT 2083397
Query 111969 GTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024
|| | || | |||| | ||| || | |||| | || || ||||| |||||
Sbjct 2083398 GTTGATCAGGG-GGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCA 2083456
Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084
| ||| | | || ||||| ||| || ||| || | |||||| |||
Sbjct 2083457 CTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGC 2083516
Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144
| | || || |||| ||| || ||||| || || |||||||||||| | || ||| | |
Sbjct 2083517 CAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAA 2083576
Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTG 112203
| | ||||| || | ||||| | | | ||||| || || ||| | ||| |
Sbjct 2083577 CGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTG-GGGGG 2083635
Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACGGTG 112262
|||||||||||| |||||||| | || ||| | || | ||| || ||| ||||
Sbjct 2083636 AGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGA-AGCGTGTGGTG 2083694
Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322
||| | | ||| | || || || |||| || || || || || || || ||
Sbjct 2083695 AAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTAC 2083754
Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382
||| | |||||||| ||||| ||| ||||| || || ||||| |||| ||||||
Sbjct 2083755 ATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAG 2083814
Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442
| ||||||||| || |||||| | || | || ||| || ||| ||| || ||
Sbjct 2083815 TGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTTGC 2083874
Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 112502
|| || || || |||||||| || ||| || || ||| ||| | ||| | |
Sbjct 2083875 AATCTGGCCTCTGTCGCTCTCAACATGTACGTCACCCCTGAG---CGGACTTATGACTTT 2083931
Query 112503 GAAAAACTCCACGAAGTTACGAA---AACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559
||||| | || || || || |||| | ||| | |||| ||||| ||
Sbjct 2083932 AAAAAATTGGCATCCGTGACCAAAGTAATTGTC---AGGAACTTGAACAAGGTTATCGAC 2083988
Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619
| || | ||||| || || || | | || || ||| | ||| | || || ||
Sbjct 2083989 ATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAGGA 2084048
Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 112679
|||| ||||| || | || |||| ||||| ||| || | | ||||| | |
Sbjct 2084049 ATCGGGGTCCAGGGATTGGCTGATGCTTTCATCCTTATGCGTTATCCCTTTGAAAGCCCC 2084108
Query 112680 GAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCG 112739
|| || | |||| | || |||||||| |||||| | |||||| | || |||
Sbjct 2084109 GAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTATGCCGCTTTGGAAGCG 2084168
Query 112740 AGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 112799
|| | ||| |||| | | || | ||||| || | || || || || | |
Sbjct 2084169 AGCTGCGAGCTGGCCGCCGAGCTCGGCACCTATGAGACGTACGAAGGCTCGCC-GGTGAG 2084227
Query 112800 CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGGG 112857
||||| | || || | || ||||||| || || |||| | | | |||| ||
Sbjct 2084228 TAAGGGCATTCTCCAGTACGACATGTGGG-AGAAGACGCCAACGGACCTGTGGGACT-GG 2084285
Query 112858 ACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 112916
| ||| || ||||| ||| | | || | | ||||| || || || | |||
Sbjct 2084286 AAGCTGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTGCTGTCCCCA 2084345
Query 112917 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 112976
||||| || ||||||||||| || ||| |||| || || || | | | || |||||||
Sbjct 2084346 ATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACA 2084405
Query 112977 ACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTC 113036
| |||||||| | | ||| |||| |||||| ||| |||||| || ||
Sbjct 2084406 AGCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCAGATCGTCAACCCCCACCTG 2084465
Query 113037 GTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081
| | ||||| | ||||| || || ||| |||| ||||||
Sbjct 2084466 CTCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGAGATGAAG 2084510
>seq3467
Length=3272559
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251
|| ||||| ||| ||||| ||||||||||| ||||| ||| ||| || | |||||
Sbjct 2318174 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTG 2318233
Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311
|||||| |||| || ||||| || || ||||||||||||||| ||| | ||||||
Sbjct 2318234 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 2318293
Query 102312 G 102312
|
Sbjct 2318294 G 2318294
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251
|| ||||| ||| ||||| ||||||||||| ||||| ||| ||| || | |||||
Sbjct 2328776 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTG 2328717
Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311
|||||| |||| || ||||| || || ||||||||||||||| ||| | ||||||
Sbjct 2328716 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 2328657
Query 102312 G 102312
|
Sbjct 2328656 G 2328656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 620714815759600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |