Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3478 136 5e-27 seq3467 87.8 2e-12 >seq3478 Length=3494213 Score = 136 bits (150), Expect = 5e-27 Identities = 935/1485 (63%), Gaps = 30/1485 (2%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| ||||| ||||| |||| || | || ||||| ||| ||||| || | || Sbjct 2083041 CCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGATATCGAAGCAGTC 2083100 Query 111672 TTGGAGACATACGACAAGATGTCCC-GTGGTATGTTCATCCACGCAACACCAACCCTCTT 111730 | ||||| ||| || | |||| | || ||||| |||||| | || |||||||| Sbjct 2083101 ATCGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCGACCCTCTT 2083159 Query 111731 CAACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGA 111790 ||| ||||| || || || || ||||||| || ||||| | || | ||||| || Sbjct 2083160 CAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 2083219 Query 111791 TTCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGG 111850 ||| | || || |||| ||| || | | || |||| ||||| || | ||||| Sbjct 2083220 CAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGG 2083279 Query 111851 TGGTATCGGGATGCACATCCATGATG--TCAGAGCCAACAAGTCTCGTATTAGAGGTACA 111908 || || || || || || | || | ||| ||| | || || || Sbjct 2083280 AGGGATTGGCGTGG-CAGTCA-GCTGCATTAGATCCACGGGGAGCTACATCGCCGGCACC 2083337 Query 111909 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 111968 || || || | || | | |||||| | | || | ||| ||||||||| ||| Sbjct 2083338 AACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTAT 2083397 Query 111969 GTAAACCAAGCTGGGCGTCGCAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGCA 112024 || | || | |||| | ||| || | |||| | || || ||||| ||||| Sbjct 2083398 GTTGATCAGGG-GGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCA 2083456 Query 112025 CGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGATGAGGAGGCGCGGTG 112084 | ||| | | || ||||| ||| || ||| || | |||||| ||| Sbjct 2083457 CTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGC 2083516 Query 112085 CCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAG 112144 | | || || |||| ||| || ||||| || || |||||||||||| | || ||| | | Sbjct 2083517 CAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAA 2083576 Query 112145 TGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCCGGTCTCTCCGA-TGCCGTGGGTG 112203 | | ||||| || | ||||| | | | ||||| || || ||| | ||| | Sbjct 2083577 CGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTG-GGGGG 2083635 Query 112204 AGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCGGGCGACTGCG-ACGGTG 112262 |||||||||||| |||||||| | || ||| | || | ||| || ||| |||| Sbjct 2083636 AGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGA-AGCGTGTGGTG 2083694 Query 112263 CCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATAT 112322 ||| | | ||| | || || || |||| || || || || || || || || Sbjct 2083695 AAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTAC 2083754 Query 112323 ATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAG 112382 ||| | |||||||| ||||| ||| ||||| || || ||||| |||| |||||| Sbjct 2083755 ATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAG 2083814 Query 112383 AGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTGT 112442 | ||||||||| || |||||| | || | || ||| || ||| ||| || || Sbjct 2083815 TGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTTGC 2083874 Query 112443 AACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTAT 112502 || || || || |||||||| || ||| || || ||| ||| | ||| | | Sbjct 2083875 AATCTGGCCTCTGTCGCTCTCAACATGTACGTCACCCCTGAG---CGGACTTATGACTTT 2083931 Query 112503 GAAAAACTCCACGAAGTTACGAA---AACTGTCACAAAAAACCTAAACAGAGTTATTGAT 112559 ||||| | || || || || |||| | ||| | |||| ||||| || Sbjct 2083932 AAAAAATTGGCATCCGTGACCAAAGTAATTGTC---AGGAACTTGAACAAGGTTATCGAC 2083988 Query 112560 AGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 112619 | || | ||||| || || || | | || || ||| | ||| | || || || Sbjct 2083989 ATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAGGA 2084048 Query 112620 CTCGGTGTCCAAGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 112679 |||| ||||| || | || |||| ||||| ||| || | | ||||| | | Sbjct 2084049 ATCGGGGTCCAGGGATTGGCTGATGCTTTCATCCTTATGCGTTATCCCTTTGAAAGCCCC 2084108 Query 112680 GAAGCGAAGGAAATCAATGCGCGTATATTTGAGACAATGTATCACGCCGCTCTTGAGGCG 112739 || || | |||| | || |||||||| |||||| | |||||| | || ||| Sbjct 2084109 GAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTATGCCGCTTTGGAAGCG 2084168 Query 112740 AGTTCGGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 112799 || | ||| |||| | | || | ||||| || | || || || || | | Sbjct 2084169 AGCTGCGAGCTGGCCGCCGAGCTCGGCACCTATGAGACGTACGAAGGCTCGCC-GGTGAG 2084227 Query 112800 CAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGGG 112857 ||||| | || || | || ||||||| || || |||| | | | |||| || Sbjct 2084228 TAAGGGCATTCTCCAGTACGACATGTGGG-AGAAGACGCCAACGGACCTGTGGGACT-GG 2084285 Query 112858 ACGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCA 112916 | ||| || ||||| ||| | | || | | ||||| || || || | ||| Sbjct 2084286 AAGCTGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTGCTGTCCCCA 2084345 Query 112917 ATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACG 112976 ||||| || ||||||||||| || ||| |||| || || || | | | || ||||||| Sbjct 2084346 ATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACA 2084405 Query 112977 ACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCTC 113036 | |||||||| | | ||| |||| |||||| ||| |||||| || || Sbjct 2084406 AGCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCAGATCGTCAACCCCCACCTG 2084465 Query 113037 GTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 113081 | | ||||| | ||||| || || ||| |||| |||||| Sbjct 2084466 CTCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGAGATGAAG 2084510 >seq3467 Length=3272559 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251 || ||||| ||| ||||| ||||||||||| ||||| ||| ||| || | ||||| Sbjct 2318174 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTG 2318233 Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311 |||||| |||| || ||||| || || ||||||||||||||| ||| | |||||| Sbjct 2318234 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 2318293 Query 102312 G 102312 | Sbjct 2318294 G 2318294 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 102192 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 102251 || ||||| ||| ||||| ||||||||||| ||||| ||| ||| || | ||||| Sbjct 2328776 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTG 2328717 Query 102252 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 102311 |||||| |||| || ||||| || || ||||||||||||||| ||| | |||||| Sbjct 2328716 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 2328657 Query 102312 G 102312 | Sbjct 2328656 G 2328656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620714815759600