Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq3522 132 1e-25 >seq3522 Length=4083170 Score = 132 bits (146), Expect = 1e-25 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || |||||||| || |||||||| || || || ||||| || | || || Sbjct 3190529 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3190470 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || ||||||||| Sbjct 3190469 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCT 3190410 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099 || ||||| || ||||| ||| |||||||| |||||||| || || |||||| Sbjct 3190409 TCCTTGTCCTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGG 3190350 Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | ||||| || || | ||||| || || | ||||| Sbjct 3190349 GTGATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCAT 3190309 Score = 131 bits (144), Expect = 4e-25 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || |||||||| || |||||||| || || || ||||| || | || || Sbjct 3190757 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3190698 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || ||||||||| Sbjct 3190697 CGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCT 3190638 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096 || ||||| || ||||| ||| ||||| ||||| ||||| |||| || || || Sbjct 3190637 TCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTC---ACTTGGCTCAACCTCC 3190581 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | || || ||||| | ||||| Sbjct 3190580 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190537 Score = 131 bits (144), Expect = 4e-25 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || |||||||| || |||||||| || || || ||||| || | || || Sbjct 3190985 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3190926 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || |||||||| Sbjct 3190925 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3190866 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 || || || || ||||| ||||||||||||||||||||| ||| || || || Sbjct 3190865 TCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCC 3190809 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | || || ||||| | ||||| Sbjct 3190808 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190765 Score = 131 bits (144), Expect = 4e-25 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || |||||||| || |||||||| || || || ||||| || | || || Sbjct 3191213 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3191154 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || |||||||| Sbjct 3191153 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3191094 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 || || || || ||||| ||||||||||||||||||||| ||| || || || Sbjct 3191093 TCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCC 3191037 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | || || ||||| | ||||| Sbjct 3191036 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190993 Score = 131 bits (144), Expect = 4e-25 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || |||||||| || |||||||| || || || ||||| || | || || Sbjct 3191441 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3191382 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || ||||||||| Sbjct 3191381 CGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCT 3191322 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096 || ||||| || ||||| ||| ||||| ||||| ||||| |||| || || || Sbjct 3191321 TCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTC---ACTTGGCTCAACCTCC 3191265 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | || || ||||| | ||||| Sbjct 3191264 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191221 Score = 131 bits (144), Expect = 4e-25 Identities = 164/224 (73%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || ||||||||| || |||||||| || || || ||||| || | || || Sbjct 3191669 CTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3191610 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || |||||||| Sbjct 3191609 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3191550 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 || || || || || || ||||||||||||||||||||| ||| || || || Sbjct 3191549 TCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCC 3191493 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| | ||||| || || | || || ||||| | ||||| Sbjct 3191492 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191449 Score = 122 bits (134), Expect = 2e-22 Identities = 162/224 (72%), Gaps = 6/224 (3%) Strand=Plus/Minus Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979 ||||| | || |||||||| || |||||||| || || || ||||| || | || || Sbjct 3219851 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3219792 Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039 | |||||||| |||||||| || || ||||| || | || ||||| || |||||||| Sbjct 3219791 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3219732 Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096 || || || || ||||| |||||| |||||||||||||| ||| || || || Sbjct 3219731 TCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCG 3219675 Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || || | ||||| || || | ||||| || || | ||||| Sbjct 3219674 AGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCAT 3219631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109431064846685