Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 132 1e-25
>seq3522
Length=4083170
Score = 132 bits (146), Expect = 1e-25
Identities = 162/221 (73%), Gaps = 0/221 (0%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || |||||||| || |||||||| || || || ||||| || | || ||
Sbjct 3190529 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3190470
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| |||||||| || || ||||| || | || ||||| || |||||||||
Sbjct 3190469 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCT 3190410
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGG 195099
|| ||||| || ||||| ||| |||||||| |||||||| || || ||||||
Sbjct 3190409 TCCTTGTCCTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGG 3190350
Query 195100 GTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||||| || || | ||||| || || | |||||
Sbjct 3190349 GTGATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCAT 3190309
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || |||||||| || |||||||| || || || ||||| || | || ||
Sbjct 3190757 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3190698
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| |||||||| || || ||||| || | || ||||| || |||||||||
Sbjct 3190697 CGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCT 3190638
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096
|| ||||| || ||||| ||| ||||| ||||| ||||| |||| || || ||
Sbjct 3190637 TCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTC---ACTTGGCTCAACCTCC 3190581
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || || | || || ||||| | |||||
Sbjct 3190580 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190537
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || |||||||| || |||||||| || || || ||||| || | || ||
Sbjct 3190985 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3190926
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| |||||||| || || ||||| || | || ||||| || ||||||||
Sbjct 3190925 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3190866
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096
|| || || || ||||| ||||||||||||||||||||| ||| || || ||
Sbjct 3190865 TCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCC 3190809
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || || | || || ||||| | |||||
Sbjct 3190808 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190765
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || |||||||| || |||||||| || || || ||||| || | || ||
Sbjct 3191213 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3191154
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| |||||||| || || ||||| || | || ||||| || ||||||||
Sbjct 3191153 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3191094
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096
|| || || || ||||| ||||||||||||||||||||| ||| || || ||
Sbjct 3191093 TCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCC 3191037
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || || | || || ||||| | |||||
Sbjct 3191036 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190993
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || |||||||| || |||||||| || || || ||||| || | || ||
Sbjct 3191441 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3191382
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| |||||||| || || ||||| || | || ||||| || |||||||||
Sbjct 3191381 CGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCT 3191322
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCA 195096
|| ||||| || ||||| ||| ||||| ||||| ||||| |||| || || ||
Sbjct 3191321 TCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTC---ACTTGGCTCAACCTCC 3191265
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || || | || || ||||| | |||||
Sbjct 3191264 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191221
Score = 131 bits (144), Expect = 4e-25
Identities = 164/224 (73%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || ||||||||| || |||||||| || || || ||||| || | || ||
Sbjct 3191669 CTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3191610
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| |||||||| || || ||||| || | || ||||| || ||||||||
Sbjct 3191609 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3191550
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096
|| || || || || || ||||||||||||||||||||| ||| || || ||
Sbjct 3191549 TCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTC---ACTGGGCTCAACCTCC 3191493
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
||||| | ||||| || || | || || ||||| | |||||
Sbjct 3191492 AGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191449
Score = 122 bits (134), Expect = 2e-22
Identities = 162/224 (72%), Gaps = 6/224 (3%)
Strand=Plus/Minus
Query 194920 CTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTT 194979
||||| | || |||||||| || |||||||| || || || ||||| || | || ||
Sbjct 3219851 CTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTG 3219792
Query 194980 CTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCT 195039
| |||||||| |||||||| || || ||||| || | || ||||| || ||||||||
Sbjct 3219791 CGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCC 3219732
Query 195040 TCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCA 195096
|| || || || ||||| |||||| |||||||||||||| ||| || || ||
Sbjct 3219731 TCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTC---ACTGGGCTCAACCTCG 3219675
Query 195097 AGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| || | ||||| || || | ||||| || || | |||||
Sbjct 3219674 AGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCAT 3219631
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109431064846685
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |