Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq3011 145 6e-30
seq3222 105 5e-18
>seq3011
Length=8691009
Score = 145 bits (160), Expect = 6e-30
Identities = 138/175 (79%), Gaps = 1/175 (1%)
Strand=Plus/Minus
Query 30150 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30209
|||||| ||||||||||| || || |||||||||||||| || ||||| || || |||||
Sbjct 8387131 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTC 8387072
Query 30210 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30269
|||||||| |||| ||| || ||||||| |||||| | || |||||||| ||
Sbjct 8387071 ACCCTCTTCTCTGTCAGTGAACCCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATC 8387012
Query 30270 CCAGATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30323
||||||||| || || || || || ||||| ||||| ||||| || |||| ||||
Sbjct 8387011 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 8386957
Score = 120 bits (132), Expect = 2e-22
Identities = 123/161 (76%), Gaps = 0/161 (0%)
Strand=Plus/Minus
Query 29869 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 29928
|| || || | ||| || |||||||| || || || || |||||||||||||| || ||
Sbjct 8387944 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 8387885
Query 29929 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 29988
|| || | ||||| || | || | |||||| ||||||||||| ||||| ||||||| |
Sbjct 8387884 ACTCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCAC 8387825
Query 29989 ACGTAAAACTGACACATGGTGTGGCACGGAGGAAGAGCCAT 30029
||||| ||||| || | | |||||| || || || |||||
Sbjct 8387824 ACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 8387784
>seq3222
Length=554146
Score = 105 bits (116), Expect = 5e-18
Identities = 85/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 112107 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 112166
|| |||||||||||| | ||| | |||| ||||||||||| ||||| || ||||||||
Sbjct 272003 CTTCCTGCTGAGGACAATGTTGACTCTGTTGCTCAGAGGTCTGTTCTTCTCTGGGATGGA 272062
Query 112167 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 112209
| |||| ||||| | ||||| |||||||| ||||||||||||
Sbjct 272063 GTACCACGTCTTCTTGCCCATGATCACCACATTCTGCTTGCCT 272105
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408599896004015
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |