Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_019495.1
Length=290304
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 253 4e-62
seq3467 132 9e-26
seq2977 114 2e-20
>seq3478
Length=3494213
Score = 253 bits (280), Expect = 4e-62
Identities = 1042/1625 (64%), Gaps = 61/1625 (4%)
Strand=Plus/Minus
Query 221036 GAGCCCTTGTTGACCAAAAGCTCGGTACGCATCTCGTCCGTCCATAGACCCCTCTCTTCC 221095
||||| ||||| | | |||| | | |||||| || |||| || ||||||||| |
Sbjct 2084536 GAGCCATTGTTAGCGATCAGCTGGTTCTTCATCTCCTCATTCCACAGGCCCCTCTCTGTC 2084477
Query 221096 AGCACCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGG 221155
|| | |||| || ||| ||| || | || || || ||||||||||||| | |
Sbjct 2084476 AGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTG 2084417
Query 221156 TACAGGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTG 221215
|| | ||| ||| | | |||||| ||||||||||||||||||||| || ||| |
Sbjct 2084416 TAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAG 2084357
Query 221216 GCGGTGGGCATGGGTGCCACCAGCAGACTGTTGCGCAGTCCGAATCTATTGATGGACTT- 221274
|| |||||||| || | || |||||| ||||| | || || || | ||| | |||
Sbjct 2084356 GCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCC--ATGT-TTGGCGATCTTC 2084300
Query 221275 TC--TCAGCGTGTTCCAGTCACAGTGTCCTCCCAGGTCNNNNNNNNNNNNNNNNNNNNNN 221332
|| ||||| |||||||| || ||||||
Sbjct 2084299 TCCTTCAGCAGCTTCCAGTCCCA---------CAGGTCCGTTGGCGTCTTCTCCCACATG 2084249
Query 221333 NNNNNNNNNNNNNNNNNNTTAGACACCGGACTCCCATCGTACGACTCGTAGGGACCGTAC 221392
||| |||||| || ||||||| ||| |||| ||| |
Sbjct 2084248 TCGTACTGGAGAATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGAGC 2084189
Query 221393 AGTTCGGCCTGGGCGCAAGACTGCGTC-AGGGCAGCGTGGTAGATGGTCTCAAAGATCAT 221451
||||| | |||| | || || | || || | || || ||||||||||||
Sbjct 2084188 TCGGCGGCCAGCTCGCAGCTC-GCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTG 2084130
Query 221452 CTTGTTGAGTCTCTTG-GCCTCGGGAGAAGTGAAGGGCATA-CGCAGCATC-TGAAAGAC 221508
||||||| | ||| |||||||| | | || || ||| |||| | |||||| |
Sbjct 2084129 GATGTTGAG-CAGTTGAGCCTCGGG-GCTTTCAAAGGGATAACGCATAAGGATGAAAG-C 2084073
Query 221509 GTCGGCCAGTCCCTGTACTCCGATACCGATGGGCCTGTGTCTCCTGTTGGAAGCGGCC-- 221566
|| |||| |||||| || ||||| || || |||||||| | | |||| || | ||
Sbjct 2084072 ATCAGCCAATCCCTGGACCCCGATTCCTATCGGCCTGTGGCGCATGTTCGA--CCTCCTG 2084015
Query 221567 GCTTCTGGCACGGGATAAAAGTTGACGTCGATCAGATTGTTGAGGTTCAGAGTGATGACT 221626
|||||| ||| || || |||||| |||||| | ||||| | |||| ||||
Sbjct 2084014 GCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTTCC------TGAC- 2083962
Query 221627 TTAACCACCTCGGTCA--GCTTCTGGTGATTGAACACCAACTCGCCGCCGTCGTGGAGGG 221684
|| || | ||||| | | | | || || || |||| || ||||
Sbjct 2083961 --AATTACTTTGGTCACGGATGCCAATTTTTTAAAGTCATAAGTCCGC--TC----AGGG 2083910
Query 221685 GTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGTTACACACGGCCACCTCGTCCTTGT 221744
|| | | | | || || || || |||||| || || || |||||||||||||||
Sbjct 2083909 GTGACGTACATG--TTGAGAGCGACAGAGGCCAGATTGCAAACCGCCACCTCGTCCTTGC 2083852
Query 221745 TGGTATACTGTATGATCTCTGTACAGAGGTTGCTGCACTTGATGGTCCCCAGGTGATTGT 221804
| || |||| | ||| || || ||||||||||||||||||||||| ||||| | | |
Sbjct 2083851 TAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCT 2083792
Query 221805 GATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCATAAAGGGACCGCCAGTCTCCAGCT 221864
| || ||| | ||| || || ||||||| ||| | || || || || ||
Sbjct 2083791 GGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCT 2083732
Query 221865 GAGCCACCAGAATCTTGTCCCAGAGTTCTCTG-GCGCTCACCGTCCTCTTGACTGCACCC 221923
| | | | | || | ||| || | ||| || ||||| | ||| || |||
Sbjct 2083731 GCGACTCGATGATTGCATACCATAGCTG-CTGAGCCTTCACCACACGCTTCACCCTCCCC 2083673
Query 221924 TCGGTCTTTTCATACCCGGTATAGAGCATGTCAAACTTTTCACCGTACGCCTCGTCCAGG 221983
|| ||| ||||| | ||| ||||| ||||||| || || | ||| |||||
Sbjct 2083672 TC---CTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGC 2083616
Query 221984 CCTGGACACCTGGCGGGACACATCAGACTCCAGTGCTTGTTGTCTTTGACCCTCTGCATG 222043
|| || || ||| ||||||||||| ||||| | ||||| | |||| || ||||
Sbjct 2083615 CCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCGTTGTTCTCCACCCGCTTCATG 2083556
Query 222044 AAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTCCACGCCG 222103
|||||||| ||||||||||| || | || || || |||| |||||||||||| ||
Sbjct 2083555 AAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCC 2083496
Query 222104 TTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAGATAGACG 222163
|||| ||| |||| |||| || ||||| | || |||||| |||||||| || | |
Sbjct 2083495 GTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATG 2083436
Query 222164 GCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAGAGCGTTGAAG 222223
|| | |||||||||| |||||||| |||||||| || | | | |||| |
Sbjct 2083435 GCGAAGGCGCCGGGTCTTTTGTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAA 2083376
Query 222224 ATGCGAAGGGTCGGTACCAGTCCGTTGGATCGACCGTTGGTGCCCTTAATGTA-CGCACC 222282
| | | | || || || |||||||| | ||||||||||| ||||| | | ||
Sbjct 2083375 ACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTGCCGGCGATGTAGCTCCCC 2083316
Query 222283 GCCGGCCCTCAGGTTACTGGCAGACATGCCGATACCACCGGCGTGTTTCGAGATCATGGC 222342
| || || | | ||| | | || ||| || || || || ||| ||||| | |||
Sbjct 2083315 G-TGGATCTAATGCAGCTGACTGCCACGCCAATCCCTCCAGCTGATTTGGAGATGAGGGC 2083257
Query 222343 GCAGCTCTTGAGAGTGTCCATGATGCCCTCCATAGAGTCCTCCTTGACGTTCAGCAGAAA 222402
||| ||| || ||||| ||| ||||| || ||| ||||| | | ||||| ||
Sbjct 2083256 GCAATGCTTTAGCGTGTCGTAGATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAA 2083197
Query 222403 ACAAGACGACATCTGAGATTTGGTGGAACAGGCGTTAAACAGCGTGGGACTGGCGTGTGT 222462
|| |||| ||| | || ||| | || || || || || || |||||| ||
Sbjct 2083196 GCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGT 2083137
Query 222463 AAAGTAGCCCCTAGACATCAGATCGTACGTCTCTACGACTCTGGCGATGTTGTCCCCGTG 222522
|| | | |||| ||| | ||| ||||| | |||| |||| | ||||||
Sbjct 2083136 GAACCACTTCTCTGACAGCAGGTTGTAGGTCTCGATGACTGCTTCGATATCCGTCCCGTG 2083077
Query 222523 AATCTGCATGGCGCATCTCATGTACATGTACTGGGGCCTCT---CCACAGGACCCTTGGA 222579
|| || || |||||| ||||| ||| || | || | || || || ||
Sbjct 2083076 GATTCCCACAGCCACCCTCATGAGCATGTGCTGCGGACGCTCAGCTACTTTGCCATT-GA 2083018
Query 222580 GCTGGAGAGCAGGTACGATTTTTCCAGAGTCTTGAACCCAAAGTAGTTG-AGGTCAAAGT 222638
|| |||||||| || |||||||||||||| |||||| ||||| ||| ||| |
Sbjct 2083017 TCT--TTAGCAGGTAGGAGCGCTCCAGAGTCTTGAAGCCAAAGAAGTTGTAGGAGAAA-T 2082961
Query 222639 CTCTG 222643
|||||
Sbjct 2082960 CTCTG 2082956
>seq3467
Length=3272559
Score = 132 bits (146), Expect = 9e-26
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Plus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||| |||||||| ||||||||||| ||||| ||| |||||||| ||
Sbjct 2318159 GGAGAGCGCGTGGTGGCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCC 2318218
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|||||||||||||| ||| ||| || |||||||| ||| ||| ||||||||||||
Sbjct 2318219 GCCATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 2318278
Query 25993 ATCAGCAGGGACGAGG 26008
|||||||| |||||||
Sbjct 2318279 ATCAGCAGAGACGAGG 2318294
Score = 132 bits (146), Expect = 9e-26
Identities = 111/136 (82%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| ||||| |||| |||||||| ||||||||||| ||||| ||| |||||||| ||
Sbjct 2328791 GGAGAGCGCGTGGTGGCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCC 2328732
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|||||||||||||| ||| ||| || |||||||| ||| ||| ||||||||||||
Sbjct 2328731 GCCATCTTCTGGCTGAAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTC 2328672
Query 25993 ATCAGCAGGGACGAGG 26008
|||||||| |||||||
Sbjct 2328671 ATCAGCAGAGACGAGG 2328656
>seq2977
Length=7416971
Score = 114 bits (126), Expect = 2e-20
Identities = 107/136 (79%), Gaps = 0/136 (0%)
Strand=Plus/Minus
Query 25873 GGCGAGCGGCTGGTAGCCTTTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCG 25932
|| |||||| | || || ||||| |||||||| |||||||| ||| ||||| |||||
Sbjct 6481990 GGGGAGCGGATTGTGGCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGTTCATTTGCT 6481931
Query 25933 GCCATCTTCTGGCTCAAGCAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTC 25992
|| |||| |||||| ||| ||| |||| ||||| || || || ||||||||||||
Sbjct 6481930 GCTATCTACTGGCTGAAGAAGAGGGGGTTAATGCCTGGCCTTAGCTACTCCAACGAGCTC 6481871
Query 25993 ATCAGCAGGGACGAGG 26008
|| |||||||||||||
Sbjct 6481870 ATTAGCAGGGACGAGG 6481855
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 928803524459200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |