Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq3478 208 9e-49 seq1157 91.5 2e-13 seq2977 82.4 9e-11 >seq3478 Length=3494213 Score = 208 bits (230), Expect = 9e-49 Identities = 959/1494 (64%), Gaps = 48/1494 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| ||||| ||||| |||| || | || ||||||||| || || || | ||| Sbjct 2083041 CCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGATATCGAAGCAGTC 2083100 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||| ||| || | |||| | | || ||||| ||||| | || |||||||| Sbjct 2083101 ATCGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCGACCCTCTT 2083159 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||||||| || || |||||| ||||||| |||||||| |||||| ||||| || Sbjct 2083160 CAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 2083219 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 | ||| | || ||||| | || || | | | || || | ||||| || | ||||| Sbjct 2083220 CAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGG 2083279 Query 75451 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCAATAA-ATCTCGTATTCGGGGGAC 75507 || ||||| || || || | || | ||| ||| | || || || || Sbjct 2083280 AGGGATTGGCGTGG-CAGTCA-GCTGCATTAGATCCACGGGGAGCTAC-ATCGCCGGCAC 2083336 Query 75508 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 75567 || || || | || | | |||||| | | || | ||| ||||||||| || Sbjct 2083337 CAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTA 2083396 Query 75568 TGTAAATCAAGCGGGGCGTCGCAAG----GGGTCCATCGCGGTCTACTTGGAACCATGGC 75623 ||| |||| | ||||| | ||| || || |||| | ||| |||| || |||| Sbjct 2083397 TGTTGATCAGG-GGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGC 2083455 Query 75624 ATGCCGATATCATGGAGTTCCTTGAGTT-ACGACTCAACCAAGGTGACGAAGAGGCTCGG 75682 | |||| | | || ||||| ||| | | || ||| || | || ||| || Sbjct 2083456 ACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAG-AACACGGGAAAGGAGGAGCAGCGA 2083514 Query 75683 TGTAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAG 75742 || || || || | |||||||||| || ||||| |||||||||||||| ||| | Sbjct 2083515 GCCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAAC 2083574 Query 75743 GGTGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGA-CGCGGTGGG 75801 | | ||||| || | ||||| | | | || || || || || | ||| Sbjct 2083575 AACGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTG-GGG 2083633 Query 75802 TGAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGT 75861 ||||||||||||| |||||||| | ||||| ||||||| || | || ||| || Sbjct 2083634 GGAGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGAA-GCGTGTGG 2083692 Query 75862 ACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCAT 75920 || | | | | | ||| | || || || | || ||||| || || || || || | Sbjct 2083693 TGAAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGT 2083752 Query 75921 ATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCA 75980 | ||| | ||||| ||||| || |||| |||||| ||||| ||||| |||| || |||| Sbjct 2083753 ACATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCA 2083812 Query 75981 AGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTT 76040 || || || || ||||||||||| | |||||||| ||||| ||| ||| |||| Sbjct 2083813 AGTGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTT 2083872 Query 76041 GCAATTTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATT 76100 ||||| |||| || |||| || | ||| |||| ||| || |||| ||| | Sbjct 2083873 GCAATCTGGCCTCTGTCGCTCTCAACATGTACGTCACCCCTGAG---CGGACTTATGACT 2083929 Query 76101 ATGAAAAACT-TCAT--GAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTG 76157 | ||||| | ||| | | || | ||||| || || | ||| || || | Sbjct 2083930 TTAAAAAATTGGCATCCGTGACCAAAGTAATTGT---CAGGAACTTGAACAAGGTTATCG 2083986 Query 76158 ACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTG 76217 ||| || | || || || || || | | ||| || ||||| ||||| || || | Sbjct 2083987 ACATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAG 2084046 Query 76218 GTTTGGGTGTTCAAGGTCTCGCGGATGTATTTAT-TTTGTGCCGCTACGCATTTGATTCA 76276 | | || || || || | || |||| || || || || || || | ||||| Sbjct 2084047 GAATCGGGGTCCAGGGATTGGCTGATGCTTTCATCCTTATG-CGTTATCCCTTTGA---- 2084101 Query 76277 GATGAAGCCAAGGAGATGAA-TGCT-------CGTATCTTTGAAACCATGTATCACGCAT 76328 ||||| | | | || |||| | |||||||| || |||||| | || Sbjct 2084102 ----AAGCCCCGAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTATGCCG 2084157 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 | |||| ||||| || || |||| | | | || |||||||||| | || || | Sbjct 2084158 CTTTGGAAGCGAGCTGCGAGCTGGCCGCCGAGCTCGGCACCTATGAGACGTACGAAGGCT 2084217 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAA-GCTCAAC 76447 | || | | | || | || |||| || ||||||| || || |||| | | Sbjct 2084218 CGCCGGTGAGTAAGGGCATTCTCCAGTACGACATGTGGG-AGAAGACGCCAACGGACCTG 2084276 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTG 76507 | |||||| | | || ||||| ||| | | || | | ||||| || || Sbjct 2084277 TGGGACTGGAAGCTGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTG 2084336 Query 76508 ATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAA 76567 || | |||||||| || ||||||||||| || ||| |||| || || || | | | || Sbjct 2084337 CTGTCCCCAATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAG 2084396 Query 76568 CCATACACAACAAACATCTACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAAC 76627 | ||||||| ||||||||| | | ||| | || |||||| || |||||| Sbjct 2084397 GCCTACACAAGCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCAGATCGTCAAC 2084456 Query 76628 AAGCACCTCGTCAATGACCTCAAGAAGATTGGTCTCTGGTCCAAGGATATGAAG 76681 ||||| |||| ||||| | ||| || || ||| |||| |||||| Sbjct 2084457 CCCCACCTGCTCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGAGATGAAG 2084510 >seq1157 Length=2784775 Score = 91.5 bits (100), Expect = 2e-13 Identities = 101/135 (75%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 75896 TCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAGT 75955 || ||||| || ||||| |||||||| ||| ||||||||||||| || |||| |||||| Sbjct 2749493 TCGCAGACAGAAACTGGTACACCATACATGGTTTACAAGGATGCCTGCAACAGAAAGAGT 2749552 Query 75956 AACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTAC 76015 || || | || |||| || ||||| | ||||| ||||| || || |||||||| Sbjct 2749553 AATCAGCAAAACCTGGGCACTATCAAATCCAGCAATCTGTGCACAGAGATCGTAGAGTAC 2749612 Query 76016 ACAGATAAGGATGAG 76030 || || |||||| Sbjct 2749613 ACGAGCAAAGATGAG 2749627 >seq2977 Length=7416971 Score = 82.4 bits (90), Expect = 9e-11 Identities = 100/134 (75%), Gaps = 2/134 (1%) Strand=Plus/Minus Query 65077 GAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCATTCTGC-GC 65135 ||||| || | || ||||| |||||| || ||||||||||| || ||||| ||| || Sbjct 6481987 GAGCGGATTGTGGCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGTTCATT-TGCTGC 6481929 Query 65136 TATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATGAACTTAT 65195 ||| || ||| |||||||| |||| | ||||| ||||| ||| ||| || || || || Sbjct 6481928 TATCTACTGGCTGAAGAAGAGGGGGTTAATGCCTGGCCTTAGCTACTCCAACGAGCTCAT 6481869 Query 65196 TTCCCGAGATGAGG 65209 | | | || |||| Sbjct 6481868 TAGCAGGGACGAGG 6481855 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596543089938400