Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq2944 176 6e-38 seq1379 176 6e-38 seq513 161 1e-33 seq2908 141 1e-27 seq2388 141 1e-27 seq3478 125 9e-23 seq3467 95.1 1e-13 seq413 95.1 1e-13 seq824 87.8 2e-11 seq2977 86.0 8e-11 seq480 86.0 8e-11 >seq2944 Length=6283502 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 6083367 GCTTGGCCAGCTCACCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 6083426 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| |||||| | | ||||||| |||| | Sbjct 6083427 TGGTGGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCGAAGA 6083486 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 6083487 TGTCGTTGACGAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 6083546 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 6083547 GCACCTGCTTCAGCACCTTGTA 6083568 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 6106663 GCTTGGCCAGCTCACCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 6106722 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| |||||| | | ||||||| |||| | Sbjct 6106723 TGGTGGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCGAAGA 6106782 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 6106783 TGTCGTTGACGAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 6106842 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 6106843 GCACCTGCTTCAGCACCTTGTA 6106864 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 6112845 GCTTGGCCAGCTCACCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 6112904 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| |||||| | | ||||||| |||| | Sbjct 6112905 TGGTGGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCGAAGA 6112964 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 6112965 TGTCGTTGACGAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 6113024 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 6113025 GCACCTGCTTCAGCACCTTGTA 6113046 >seq1379 Length=720876 Score = 176 bits (194), Expect = 6e-38 Identities = 160/202 (79%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| ||| | ||||||||||||||||||||||| | | | || Sbjct 156608 GCTTGGCCAGCTCACCGGGCAGCAGGAGGCGCACGGCGGTCTGGATCTCCCTGGAGGTGA 156549 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| |||||| | | ||||||| |||| | Sbjct 156548 TGGTGGAGCGCTTGTTGTAGTGAGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCGAAGA 156489 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 156488 TGTCGTTGACGAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 156429 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 |||||||||| ||||||||||| Sbjct 156428 GCACCTGCTTCAGCACCTTGTA 156407 >seq513 Length=2262107 Score = 161 bits (178), Expect = 1e-33 Identities = 157/202 (78%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||| || |||||||||||||| | | | || Sbjct 730865 GCTTGGCCAGCTCACCGGGGAGAAGCAGGCGAACTGCGGTCTGGATCTCCCTGGAGGTGA 730924 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| |||||| | | ||||||| |||| | Sbjct 730925 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCCTCAGAGGCGATGCGCTCGAAGA 730984 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||||||||| ||||||||||||| ||| | |||| ||||||||| |||||||| Sbjct 730985 TGTCGTTGACGAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATGCCGGTGTCGGGGT 731044 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 731045 GGACCTGCTTCAGCACCTTGTA 731066 Score = 134 bits (148), Expect = 2e-25 Identities = 151/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||| || |||||||||||||| | | | || Sbjct 696224 GCTTGGCCAGCTCACCGGGGAGAAGCAGGCGAACTGCGGTCTGGATCTCCCTGGAGGTGA 696165 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| ||| ||| || | | |||| || |||| | Sbjct 696164 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGGGAGGCTTCAGCGGCGATACGCTCGAAGA 696105 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 |||| ||||| ||||| ||||||| ||| | ||| |||||||| |||||||| Sbjct 696104 TGTCATTGACGAACGAATTCATGATGCTCATGGCCTTAGACGAGATGCCGGTGTCGGGGT 696045 Query 1254523 GCACCTGCTTGAGCACCTTGTA 1254544 | |||||||| ||||||||||| Sbjct 696044 GGACCTGCTTCAGCACCTTGTA 696023 >seq2908 Length=213623 Score = 141 bits (156), Expect = 1e-27 Identities = 154/203 (76%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||||| |||||||||||||| | | || Sbjct 4106 GCTTGGCCAGCTCACCGGGGAGAAGGAGGCGCACTGCGGTCTGGATCTCCCTGGAAGTGA 4165 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| || ||||||| ||||||| |||| | Sbjct 4166 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGAGATGCCTCGGCTGCGATGCGCTCGAAGA 4225 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGAC-TTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||||||||||||||||| ||| | | ||| |||||| || ||||||| Sbjct 4226 TGTCGTTGACAAACGAGTTCATGATGCTCATGGCCTTTGGAGGAGATCCCGGTGTCGGGG 4285 Query 1254522 TGCACCTGCTTGAGCACCTTGTA 1254544 || |||||||| ||||||||||| Sbjct 4286 TGGACCTGCTTCAGCACCTTGTA 4308 >seq2388 Length=499105 Score = 141 bits (156), Expect = 1e-27 Identities = 154/203 (76%), Gaps = 1/203 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || ||||||| || ||| | | | |||||||| |||||||||||||| | | || Sbjct 451870 GCTTGGCCAGCTCACCGGGGAGAAGGAGGCGCACTGCGGTCTGGATCTCCCTGGAAGTGA 451929 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||||||||| |||| ||||| || ||||||| ||||||| |||| | Sbjct 451930 TGGTGGAGCGCTTGTTGTAGTGGGCCAGGCGAGATGCCTCGGCTGCGATGCGCTCGAAGA 451989 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGAC-TTGTTGGAGATGCCCACGTCGGGG 1254521 |||||||||||||||||||||||| ||| | | ||| |||||| || ||||||| Sbjct 451990 TGTCGTTGACAAACGAGTTCATGATGCTCATGGCCTTTGGAGGAGATCCCGGTGTCGGGG 452049 Query 1254522 TGCACCTGCTTGAGCACCTTGTA 1254544 || |||||||| ||||||||||| Sbjct 452050 TGGACCTGCTTCAGCACCTTGTA 452072 >seq3478 Length=3494213 Score = 125 bits (138), Expect = 9e-23 Identities = 275/421 (65%), Gaps = 0/421 (0%) Strand=Plus/Minus Query 1628162 ACTGGACGATCTCGGTGCACAGGTTGGCCGACGTCGTCGTACCCAGGTTCTGCTGGTTGG 1628221 ||| |||||| || ||||| |||||| || | | || ||||| |||||||||||| Sbjct 2083845 ACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGC 2083786 Query 1628222 TGGTCAGGTTGACGGCGTCCTTGTGGAGCATGTAGGGCGCGCCGGTCTCGATCTGCGCCG 1628281 | || |||| ||| || |||| || |||||| |||| ||||| || |||||| | Sbjct 2083785 TCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACT 2083726 Query 1628282 CGACGATGGCCGACCAGATCTGGCGCGCGGGCACGACAGTCCGCGCGCGGCCCTNNNNNN 1628341 ||| ||| || |||| | ||| | || ||| ||| | | | | |||| Sbjct 2083725 CGATGATTGCATACCATAGCTGCTGAGCCTTCACCACACGCTTCACCCTCCCCTCCTTCT 2083666 Query 1628342 NNNNNNNNNNNNNNNNNNNNTCAAAGGCCGCGCCGTAGCACTCGTGCAGGCCGGGCGCCT 1628401 ||||| || | || ||||||| | ||| ||||| | Sbjct 2083665 CATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGT 2083606 Query 1628402 CGGACGGACAAAAGAGCGACCAGTCGCCACCGGTCACCGCGCGGCGCATAAAGAGGTCAC 1628461 ||| |||||| | || |||||||| | | || || | || ||| ||||||||| Sbjct 2083605 CGGCCGGACACATCAGGGACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAG 2083546 Query 1628462 ACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCTTGCCGTGGTTCTTTT 1628521 ||||||| ||||| || ||||| | || || | ||||||||| || |||||| | Sbjct 2083545 GGATCCACAGGGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCT 2083486 Query 1628522 TGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGTAGCAGGCAAAGGCGC 1628581 | || || || |||| | | ||| |||||| ||||||||||| ||| ||||||| Sbjct 2083485 TCAGCTCCAGGAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGC 2083426 Query 1628582 C 1628582 | Sbjct 2083425 C 2083425 Score = 120 bits (132), Expect = 4e-21 Identities = 117/151 (77%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 1627295 TCCACAGGCCGCGCGCCATCAGGCGCTTGACCAGGTGGCGGTTGACCACGGTAAAGTCGC 1627354 |||||||||| | | | ||||| |||| ||||||| ||||||| | ||| || | Sbjct 2084496 TCCACAGGCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCC 2084437 Query 1627355 CCGAGAGCACGCGGCGCGTGTAGATGTTGTTGGTGATGACCTCGCACGCCTCGGTGTTGC 1627414 |||||||||| ||||| |||||||||||| | ||| | ||||| | |||| |||||| Sbjct 2084436 CCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGC 2084377 Query 1627415 CCAGGATCTGCGACGTCGTGGCCGTGGGCAT 1627445 |||||||||| | || | |||||||||||| Sbjct 2084376 CCAGGATCTGGGCGGTGGAGGCCGTGGGCAT 2084346 >seq3467 Length=3272559 Score = 95.1 bits (104), Expect = 1e-13 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 869183 TCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTG 869242 ||||| | ||||| | |||||| |||| ||||||||||| ||||| | |||||| Sbjct 2318292 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 2318233 Query 869243 AGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 ||||| ||||||||| ||| |||||||| ||||| ||||| || ||||||||| Sbjct 2318232 AGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAG 2318176 Score = 95.1 bits (104), Expect = 1e-13 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 869183 TCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTCTTG 869242 ||||| | ||||| | |||||| |||| ||||||||||| ||||| | |||||| Sbjct 2328658 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 2328717 Query 869243 AGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 ||||| ||||||||| ||| |||||||| ||||| ||||| || ||||||||| Sbjct 2328718 AGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAG 2328774 >seq413 Length=2963037 Score = 95.1 bits (104), Expect = 1e-13 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 512050 CGTCATCTCCTTTGACGGCACCTACGTCAACGACCGCCACTTTGCGCTGGCCACCGACAC 512109 |||||||||||| ||||| ||||||||||| |||||||||| || ||| | ||||| Sbjct 407516 CGTCATCTCCTTCGACGGTTCCTACGTCAACTACCGCCACTTGGCTCTGCTCTGTGACAC 407575 Query 512110 CATGTGCTGCCGCGGATCGGTGGTGGCCGTCACGCGCCACGGCTTCAACCGC 512161 |||| |||||| || || ||||| |||| || |||||| |||||||| Sbjct 407576 CATGACCTGCCGAGGTCACCTGATGGCCATCACCCGTCACGGCATCAACCGC 407627 >seq824 Length=1399598 Score = 87.8 bits (96), Expect = 2e-11 Identities = 69/83 (83%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 1254462 ATGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGG 1254521 ||||||||||||||||||||||||| ||| | |||| |||||| || ||||||| Sbjct 45036 ATGTCGTTGACAAACGAGTTCATGATGCTCATGGCCTTGGAGGAGATCCCGGTGTCGGGG 45095 Query 1254522 TGCACCTGCTTGAGCACCTTGTA 1254544 || |||||||| ||||||||||| Sbjct 45096 TGGACCTGCTTCAGCACCTTGTA 45118 >seq2977 Length=7416971 Score = 86.0 bits (94), Expect = 8e-11 Identities = 88/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 869829 CCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTACATCTCCCATACTTGCT 869888 |||||||||| ||||||||| ||||||| ||||| ||||||||||| ||| | | Sbjct 6484061 CCACCTCCTCCACGGTCCAGAAAGAGGCCTGGGCCTGTTTGTACATCTTCCAGATGTCTC 6484120 Query 869889 GGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTCGCGCAACAGGGGTTC 869943 |||| |||| || || | |||||| || ||||||| || || | ||| ||||| Sbjct 6484121 GGTACTGGATGGGAAAAATGACAAACCGCCTGGGGTTCTCTCGGAGCAGAGGTTC 6484175 >seq480 Length=3340727 Score = 86.0 bits (94), Expect = 8e-11 Identities = 85/110 (77%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 1592186 GCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTGGGTGCAAGTCTGTGGCCAAC 1592245 ||||||||||| | |||||||| ||| | ||| | |||||| | ||||||||| Sbjct 1103487 GCCGCCAACTATTTGGACATCAAAGGCCTGTTAGATGTCACCTGCAAGACGGTGGCCAAC 1103428 Query 1592246 ATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCTTTAACATCAA 1592295 |||||||| ||||| | || ||||||||| | ||||| || |||||||| Sbjct 1103427 ATGATCAAAGGCAAAACCCCAGAGGAGATCAGGAAGACTTTCAACATCAA 1103378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106847460051935