Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq3478 150 2e-31 seq3522 104 2e-17 >seq3478 Length=3494213 Score = 150 bits (166), Expect = 2e-31 Identities = 963/1531 (63%), Gaps = 59/1531 (4%) Strand=Plus/Minus Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560 ||| | || |||||| || || | | || || || ||| |||||| | ||| | | Sbjct 2084456 GTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGC 2084397 Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620 ||| | || |||||||| ||||| ||||| || |||| || || ||||| | || Sbjct 2084396 CTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAG 2084337 Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680 || || |||| | || || ||| ||||| ||| | ||||||||| Sbjct 2084336 CAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCA 2084277 Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740 || || | || | || | |||||| |||||||| | || ||| ||| | || Sbjct 2084276 CAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGA 2084217 Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800 ||||||||||| || || || | ||| |||| |||| |||||| || | || Sbjct 2084216 GCCTTCGTACGTCTCATAGGTGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCTTCCAAAGC 2084157 Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860 |||| || ||||| || ||||| ||||||| | | ||||||| ||| || | Sbjct 2084156 GGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCAAA 2084097 Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920 || || | | |||| || || |||| || || || || | ||| | || | Sbjct 2084096 GGGATAACGCATAAGGATGAAAGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGCCT 2084037 Query 138921 ATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTT 138980 ||||||| || ||| | || |||| | || || ||||| | ||||| | || Sbjct 2084036 GTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCTT 2083977 Query 138981 GTTTAAATTTCGCACGACCACCTTAGTC--GTATGCTTTAATCGTTCAAAATCGTATGTG 139038 ||| || || | || | || || ||| | |||| ||| || ||| || || || Sbjct 2083976 GTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCC--AATTTTTTAAAGTCATAAGTC 2083919 Query 139039 CCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCAC 139098 | | | | || ||||| ||| |||||| | | ||||| | ||||| Sbjct 2083918 CGCTCAGGG--GT----GACGT--ACA----TGTTGAGAGCGACAGAGGCCAGATTGCAA 2083871 Query 139099 ACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTG 139158 |||||||| ||||| | |||| ||||| ||||| | || | || || |||||| Sbjct 2083870 ACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTG 2083811 Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218 || || || | ||| || || ||||| || | ||| || ||||||||||| | ||| ||| Sbjct 2083810 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTAC 2083751 Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCT----TG 139274 || || || ||||| || | ||| || | ||| | | || ||||| | Sbjct 2083750 GGCGTCCCGGTTTCTGTCTGCGACTCGATGA-----TTGCATA---CCATAGCTGCTGAG 2083699 Query 139275 TATTTGACGCACG--TAAAGTT--CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATC 139330 || | |||| | | | | || ||| || | ||||||||| || || Sbjct 2083698 CCTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACT 2083639 Query 139331 GTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGC 139390 || || || ||| || || | || | | | |||||||| || ||||| | Sbjct 2083638 CCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTT 2083579 Query 139391 CGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGC 139450 |||| || || ||| ||||||| || || || ||||||| ||| | | || || | Sbjct 2083578 CGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCC 2083519 Query 139451 GCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAG 139510 || || || ||| ||| |||| |||| | ||||| ||||| || || Sbjct 2083518 TGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGA 2083459 Query 139511 CGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATCGA 139567 |||||| || ||||| || ||||| | ||||| | | ||||| || ||||| | Sbjct 2083458 AGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTGTTGCCCCCCTGATCAA 2083399 Query 139568 CGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGT 139627 | | || | | || ||| | || | |||||| || | || ||| | | |||| Sbjct 2083398 CATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGT 2083339 Query 139628 TGGTGCTACGGATGGGACTGTTGCGAGCTC-----GGACGTCATGTA---CATTG--ATG 139677 |||||| || | || ||| ||||| ||| | ||| | | || | | Sbjct 2083338 TGGTGC--CG---GCGA-TGT----AGCTCCCCGTGGATCTAATGCAGCTGACTGCCACG 2083289 Query 139678 CCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCT 139737 || || || || | ||||||| || | |||||| || || ||||| || || Sbjct 2083288 CCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTTAGCGTGTCGTAGATCCCC 2083229 Query 139738 CTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTG 139797 |||||||| |||| ||| | || ||| ||||| || || ||||| || || Sbjct 2083228 TCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTT 2083169 Query 139798 CCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCAATTCGTA 139856 || || || || || || ||||| ||||| || || | | |||| || | ||| Sbjct 2083168 CCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCT-GACAGCAGGTTGTA 2083110 Query 139857 CGTTTCGATGGC-GCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCA 139915 || |||||| | ||| | |||||| | |||||||| || |||| || | ||| |||| Sbjct 2083109 GGTCTCGATGACTGCT-TCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATGAGCA 2083051 Query 139916 TATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGG 139975 | || || || || || || ||| | ||| ||| ||| || | ||| || | Sbjct 2083050 TGTGCTGCGGACGCTCAGCTACTTTGCCATTGATCTTTAGCAGGTAGGAGCGCTCCAGAG 2082991 Query 139976 TCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006 ||||| |||||||| | | ||| |||||| Sbjct 2082990 TCTTGAAGCCAAAGAAGTTGTAGGAGAAATC 2082960 >seq3522 Length=4083170 Score = 104 bits (114), Expect = 2e-17 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | |||||||| || || || || || || || || || || ||| | Sbjct 3190309 ATGCAGATCTTTGTGAAAACGCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGC 3190368 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||||| | || |||| || | ||| ||||| ||||| ||||| || || || || || Sbjct 3190369 GACACCATCGAGAACGTGAAGGCCAAA-ATCCAGGACAAGGAAGGCATTCCCCCTGACCA 3190427 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | |||||||||| || || |||||||| ||| | | | | || || || || Sbjct 3190428 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3190487 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||| || ||||| || || || ||| | || |||| Sbjct 3190488 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3190523 Score = 100 bits (110), Expect = 3e-16 Identities = 151/215 (70%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||||||| | ||||| ||||| ||||| || || || ||||| || || ||| Sbjct 3219631 ATGCAGATCTTTGTGAAAACCCTAACTGGTAAGACCATCACTCTCGAGGTTGAGCCCAGT 3219690 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || || ||||| || || || || || || ||||| || Sbjct 3219691 GACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCGACCAG 3219750 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 3219751 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 3219810 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 3219811 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3219845 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || | | Sbjct 3190537 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3190596 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || ||||| ||||| ||||| || || ||||| || Sbjct 3190597 GACACAATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3190656 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||||| || ||||| || ||| | | | | || || || ||| Sbjct 3190657 CAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAAC 3190716 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 3190717 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3190751 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || | | Sbjct 3191221 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3191280 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || || ||||| ||||| ||||| || || ||||| || Sbjct 3191281 GACACAATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3191340 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | ||||||||||||| || ||||| || ||| | | | | || || || ||| Sbjct 3191341 CAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAAC 3191400 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 3191401 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3191435 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||||||||| | || || || || || || || || || || || || || ||| Sbjct 3191449 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3191508 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 ||||| | || | || || |||||||| || || || || || || ||||| || Sbjct 3191509 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCAG 3191568 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | |||||||||| || || |||||||| ||| | | | | || || || ||| Sbjct 3191569 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 3191628 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 || || ||||| || || || ||| | || |||| Sbjct 3191629 ATCCAGAAGGAGTCCACCCTCCACCTTGTTCTGCG 3191663 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449877607675400