Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 150 2e-31
seq3522 104 2e-17
>seq3478
Length=3494213
Score = 150 bits (166), Expect = 2e-31
Identities = 963/1531 (63%), Gaps = 59/1531 (4%)
Strand=Plus/Minus
Query 138501 GTTTATGACCTGAAATTCACCGGCCAATACTCGACGAACGTAAATGTTGTTGGTGAAAGG 138560
||| | || |||||| || || | | || || || ||| |||||| | ||| | |
Sbjct 2084456 GTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGC 2084397
Query 138561 CTCAAACGATTCGTTGTTTCCCAGAATCTGAGCCGTGGTCGCGGTCGGCATGTACGCCAC 138620
||| | || |||||||| ||||| ||||| || |||| || || ||||| | ||
Sbjct 2084396 CTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAG 2084337
Query 138621 CAAAAGAGAATTCCGTAAACCGTGAAGCTTGATTCGTTCCTTGAGCGACGACCAGTCCCA 138680
|| || |||| | || || ||| ||||| ||| | |||||||||
Sbjct 2084336 CAGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCA 2084277
Query 138681 CAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACTTGCGGGACT 138740
|| || | || | || | |||||| |||||||| | || ||| ||| | ||
Sbjct 2084276 CAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGA 2084217
Query 138741 GCCTTCGTACGAATCGTATACACCAAACTCTTGCGCCAACTCGTTGCTCGCCTCGAGCGC 138800
||||||||||| || || || | ||| |||| |||| |||||| || | ||
Sbjct 2084216 GCCTTCGTACGTCTCATAGGTGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCTTCCAAAGC 2084157
Query 138801 ACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGGGCCTCGGCGCTCTCGTA 138860
|||| || ||||| || ||||| ||||||| | | ||||||| ||| || |
Sbjct 2084156 GGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCAAA 2084097
Query 138861 CGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCCCACTCCGACAGGGCG 138920
|| || | | |||| || || |||| || || || || | ||| | || |
Sbjct 2084096 GGGATAACGCATAAGGATGAAAGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGCCT 2084037
Query 138921 ATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTTTACATCGATGATTTT 138980
||||||| || ||| | || |||| | || || ||||| | ||||| | ||
Sbjct 2084036 GTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAACCTT 2083977
Query 138981 GTTTAAATTTCGCACGACCACCTTAGTC--GTATGCTTTAATCGTTCAAAATCGTATGTG 139038
||| || || | || | || || ||| | |||| ||| || ||| || || ||
Sbjct 2083976 GTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCC--AATTTTTTAAAGTCATAAGTC 2083919
Query 139039 CCCCCGTTGTCGTCGACGACGTCGACAAATTTGTTGACACAAATCGAGGCTATGTTGCAC 139098
| | | | || ||||| ||| |||||| | | ||||| | |||||
Sbjct 2083918 CGCTCAGGG--GT----GACGT--ACA----TGTTGAGAGCGACAGAGGCCAGATTGCAA 2083871
Query 139099 ACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTG 139158
|||||||| ||||| | |||| ||||| ||||| | || | || || ||||||
Sbjct 2083870 ACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTG 2083811
Query 139159 ATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATAC 139218
|| || || | ||| || || ||||| || | ||| || ||||||||||| | ||| |||
Sbjct 2083810 ATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTAC 2083751
Query 139219 GGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGTCCCTAGCT----TG 139274
|| || || ||||| || | ||| || | ||| | | || ||||| |
Sbjct 2083750 GGCGTCCCGGTTTCTGTCTGCGACTCGATGA-----TTGCATA---CCATAGCTGCTGAG 2083699
Query 139275 TATTTGACGCACG--TAAAGTT--CGTCGCGCTCGTACTTTTCGTAGAGTTCGTCGAATC 139330
|| | |||| | | | | || ||| || | ||||||||| || ||
Sbjct 2083698 CCTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACT 2083639
Query 139331 GTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACCATACGC 139390
|| || || ||| || || | || | | | |||||||| || ||||| |
Sbjct 2083638 CCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTT 2083579
Query 139391 CGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCAAATCGC 139450
|||| || || ||| ||||||| || || || ||||||| ||| | | || || |
Sbjct 2083578 CGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCC 2083519
Query 139451 GCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAACGTCAG 139510
|| || || ||| ||| |||| |||| | ||||| ||||| || ||
Sbjct 2083518 TGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCGA 2083459
Query 139511 CGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTTGATCGA 139567
|||||| || ||||| || ||||| | ||||| | | ||||| || ||||| |
Sbjct 2083458 AGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTGTTGCCCCCCTGATCAA 2083399
Query 139568 CGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTGTTCCGT 139627
| | || | | || ||| | || | |||||| || | || ||| | | ||||
Sbjct 2083398 CATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGT 2083339
Query 139628 TGGTGCTACGGATGGGACTGTTGCGAGCTC-----GGACGTCATGTA---CATTG--ATG 139677
|||||| || | || ||| ||||| ||| | ||| | | || | |
Sbjct 2083338 TGGTGC--CG---GCGA-TGT----AGCTCCCCGTGGATCTAATGCAGCTGACTGCCACG 2083289
Query 139678 CCGATTCCGCCGCCAAATTTGGATATTAAAACGCAATCGCGTAATGTCTCGTATATACCT 139737
|| || || || | ||||||| || | |||||| || || ||||| || ||
Sbjct 2083288 CCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTTAGCGTGTCGTAGATCCCC 2083229
Query 139738 CTTATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTG 139797
|||||||| |||| ||| | || ||| ||||| || || ||||| || ||
Sbjct 2083228 TCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTT 2083169
Query 139798 CCGGCTGCAAACAGAGTAGGACTCGCGTGCGTGAA-CATTTGTTTCGACATCAATTCGTA 139856
|| || || || || || ||||| ||||| || || | | |||| || | |||
Sbjct 2083168 CCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCT-GACAGCAGGTTGTA 2083110
Query 139857 CGTTTCGATGGC-GCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCA 139915
|| |||||| | ||| | |||||| | |||||||| || |||| || | ||| ||||
Sbjct 2083109 GGTCTCGATGACTGCT-TCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATGAGCA 2083051
Query 139916 TATGTTGGATCCGTTCGGCCACCGCGCCCTCGAtttttttCAGATAACCGTTCTCTAGGG 139975
| || || || || || || ||| | ||| ||| ||| || | ||| || |
Sbjct 2083050 TGTGCTGCGGACGCTCAGCTACTTTGCCATTGATCTTTAGCAGGTAGGAGCGCTCCAGAG 2082991
Query 139976 TCTTGTAGCCAAAGTACCTATAGTTGAAATC 140006
||||| |||||||| | | ||| ||||||
Sbjct 2082990 TCTTGAAGCCAAAGAAGTTGTAGGAGAAATC 2082960
>seq3522
Length=4083170
Score = 104 bits (114), Expect = 2e-17
Identities = 154/216 (71%), Gaps = 2/216 (1%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | |||||||| || || || || || || || || || || ||| |
Sbjct 3190309 ATGCAGATCTTTGTGAAAACGCTCACTGGCAAGACCATCACCCTTGAGGTTGAGCCCAGC 3190368
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
||||| | || |||| || | ||| ||||| ||||| ||||| || || || || ||
Sbjct 3190369 GACACCATCGAGAACGTGAAGGCCAAA-ATCCAGGACAAGGAAGGCATTCCCCCTGACCA 3190427
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
|| | |||||||||| || || |||||||| ||| | | | | || || || ||
Sbjct 3190428 GCAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAA 3190487
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
||| || ||||| || || || ||| | || ||||
Sbjct 3190488 CATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3190523
Score = 100 bits (110), Expect = 3e-16
Identities = 151/215 (70%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||||||| | ||||| ||||| ||||| || || || ||||| || || |||
Sbjct 3219631 ATGCAGATCTTTGTGAAAACCCTAACTGGTAAGACCATCACTCTCGAGGTTGAGCCCAGT 3219690
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || || ||||| || || || || || || ||||| ||
Sbjct 3219691 GACACCATTGAGAATGTCAAGGCCAAAATCCAGGATAAGGAGGGCATTCCCCCCGACCAG 3219750
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 3219751 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 3219810
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| | || ||||
Sbjct 3219811 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3219845
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || | |
Sbjct 3190537 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3190596
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | |||| || || || ||||| ||||| ||||| || || ||||| ||
Sbjct 3190597 GACACAATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3190656
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||||| || ||||| || ||| | | | | || || || |||
Sbjct 3190657 CAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAAC 3190716
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| | || ||||
Sbjct 3190717 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3190751
Score = 91.5 bits (100), Expect = 1e-13
Identities = 149/215 (69%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || | |
Sbjct 3191221 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCAAGT 3191280
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
|||||| | |||| || || || ||||| ||||| ||||| || || ||||| ||
Sbjct 3191281 GACACAATTGAAAACGTGAAGGCCAAAATCCAGGACAAGGAAGGCATTCCCCCCGACCAG 3191340
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | ||||||||||||| || ||||| || ||| | | | | || || || |||
Sbjct 3191341 CAGAGGCTGATCTTTGCCGGCAAGCAGCTAGAAGATGGCCGCACCCTCTCTGACTACAAC 3191400
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| | || ||||
Sbjct 3191401 ATCCAGAAGGAGTCCACCCTCCACCTTGTCCTGCG 3191435
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
||||||||||| | || || || || || || || || || || || || || |||
Sbjct 3191449 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACCCTGGAGGTTGAGCCCAGT 3191508
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||||| | || | || || |||||||| || || || || || || ||||| ||
Sbjct 3191509 GACACCATTGAGAACGTCAAGGCCAAGATCCAGGATAAGGAGGGCATTCCCCCCGACCAG 3191568
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| | |||||||||| || || |||||||| ||| | | | | || || || |||
Sbjct 3191569 CAGAGGCTGATCTTTGCTGGCAAGCAGCTGGAAGATGGCCGCACCCTCTCTGACTACAAC 3191628
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918
|| || ||||| || || || ||| | || ||||
Sbjct 3191629 ATCCAGAAGGAGTCCACCCTCCACCTTGTTCTGCG 3191663
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449877607675400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |