Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq3522 150 1e-31
>seq3522
Length=4083170
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||| | | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 3190991 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190932
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | |||||||| | ||
Sbjct 3190931 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3190872
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||| || | ||||| |||||| | || | ||| ||| ||| ||
Sbjct 3190871 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3190812
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || ||||||||||| || ||||||||||||
Sbjct 3190811 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190764
Score = 150 bits (166), Expect = 1e-31
Identities = 170/228 (75%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||| | | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 3191219 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191160
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | |||||||| | ||
Sbjct 3191159 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191100
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||| || | ||||| |||||| | || | ||| ||| ||| ||
Sbjct 3191099 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3191040
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || ||||||||||| || ||||||||||||
Sbjct 3191039 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190992
Score = 145 bits (160), Expect = 5e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||| | | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 3190763 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190704
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || ||||| ||||| |||||||| | |||||||| | ||
Sbjct 3190703 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3190644
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | ||||| || ||| | | || | ||| | | ||| ||
Sbjct 3190643 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACC 3190584
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || ||||||||||| || ||||||||||||
Sbjct 3190583 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3190536
Score = 145 bits (160), Expect = 5e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||| | | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 3191447 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191388
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| || || ||||| ||||| |||||||| | |||||||| | ||
Sbjct 3191387 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191328
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | ||||| || ||| | | || | ||| | | ||| ||
Sbjct 3191327 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACC 3191268
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || ||||||||||| || ||||||||||||
Sbjct 3191267 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3191220
Score = 141 bits (156), Expect = 6e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||| | | |||||| ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 3190535 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190476
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | |||||||| | ||
Sbjct 3190475 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 3190416
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| || |||||||| | ||||| || ||| | || | || ||| ||| ||
Sbjct 3190415 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACC 3190356
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|||| ||| |||||||| || ||||| || || |||||||||||||||
Sbjct 3190355 TCAAGGGTGATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCATG 3190308
Score = 141 bits (156), Expect = 6e-29
Identities = 168/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 34751 CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGAT 34810
|| ||||| | | ||| || ||||| | |||| ||||||||| ||||| ||||| ||
Sbjct 3191675 CCACCCCTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191616
Query 34811 AGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGC 34870
||| |||| |||| ||||| ||||| || || |||||||| | |||||||| | ||
Sbjct 3191615 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191556
Query 34871 ACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACA 34930
| |||||||| || | || || |||||| | || | ||| ||| ||| ||
Sbjct 3191555 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3191496
Query 34931 TCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978
|| | ||| |||||||| || ||||||||||| || ||||||||||||
Sbjct 3191495 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 3191448
Score = 140 bits (154), Expect = 2e-28
Identities = 178/243 (73%), Gaps = 9/243 (4%)
Strand=Plus/Minus
Query 34743 AATCATTT-----CCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAAT 34797
|||||||| || ||||| | | |||||| ||||| | |||| ||||||||| ||
Sbjct 3219870 AATCATTTATTGGCCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGAT 3219811
Query 34798 GTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTG 34857
||| ||||| || ||| |||| |||| ||||| ||||| || || |||||||| | ||
Sbjct 3219810 GTTGTAGTCAGAGAGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTG 3219751
Query 34858 CTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGAT 34915
|||||| | || | |||||||| || | ||||| ||||| || || || |
Sbjct 3219750 CTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCTTGAC--ATTCTCAATGGTG 3219693
Query 34916 TCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGC 34975
||| ||| ||| || || | || |||||||| || || ||||| || ||||||||||||
Sbjct 3219692 TCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGC 3219633
Query 34976 ATG 34978
|||
Sbjct 3219632 ATG 3219630
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325678688850545
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