Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_024447.1
Length=282356
Score E
Sequences producing significant alignments: (Bits) Value
seq3511 89.7 9e-13
seq92 87.8 3e-12
seq1446 84.2 4e-11
>seq3511
Length=2785928
Score = 89.7 bits (98), Expect = 9e-13
Identities = 118/164 (72%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436
|||| | ||| |||| | || || ||||| || || || | || || ||||||||||
Sbjct 696756 GAGCTCTGTGGAGGTATTTCATCTCCAAAGGCATTGAGTATCTGGACACTGTGTTTTTCA 696697
Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496
| || |||||||| ||||| || || | ||| || ||||| || ||||||| | ||||
Sbjct 696696 TCCTGAGGAAAAAATTTAACCAGGTCACCTTCCTGCACGTCTACCATCATTGCTCCATGT 696637
Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540
| || | | ||| | || || || ||| | |||||||| |||
Sbjct 696636 TCACGCTCTGGTGGATTGGCATCAAGTGGGTGGCAGGAGGACAG 696593
>seq92
Length=4710119
Score = 87.8 bits (96), Expect = 3e-12
Identities = 122/171 (71%), Gaps = 0/171 (0%)
Strand=Plus/Plus
Query 58369 GATAGCCAGAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGT 58428
||||||| || | ||||||||||| || || ||||| | || | | | || || ||
Sbjct 4561672 GATAGCCTCGGCTCTTTGGTGGTACTACATCTCCAAAGGAGTGGAGTTCCTGGACACTGT 4561731
Query 58429 GTTTTTCATACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTT 58488
||||||||||| ||||| ||||| || || || ||||| || ||||| || ||||| |
Sbjct 4561732 CTTTTTCATACTGAGGAAGAAGTTCAACCAAGTCAGCTTCCTCCACGTCTACCATCACTG 4561791
Query 58489 TACTATGTTTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCA 58539
|| ||||| | | | ||| | || || |||||| || | || || ||
Sbjct 4561792 CACCATGTTCATCCTCTGGTGGATTGGAATCAAATGGGTTCCCGGTGGACA 4561842
>seq1446
Length=1813966
Score = 84.2 bits (92), Expect = 4e-11
Identities = 117/164 (71%), Gaps = 0/164 (0%)
Strand=Plus/Minus
Query 58377 GAGCATTATGGTGGTACTATATATCTAAAGGGATAGAATACTTAGATACAGTGTTTTTCA 58436
|||| | |||||||| | || || || || || || || | || || ||||||||||
Sbjct 709163 GAGCTCTGTGGTGGTATTTCATCTCCAAGGGCATTGAGTATCTGGACACTGTGTTTTTCA 709104
Query 58437 TACTTAGGAAAAAGTTTAATCATGTTAGCTTTCTACACGTATATCATCATTTTACTATGT 58496
| | |||||||| ||||| || || | ||| || ||||| || ||||||| | ||||
Sbjct 709103 TCTTGAGGAAAAAATTTAACCAGGTCACCTTCCTTCACGTCTACCATCATTGCTCCATGT 709044
Query 58497 TTACTTTAGGATGGGTAGGTATTAAATGGTTTGCAGGAGGTCAG 58540
| || | | ||| | || || || ||| | |||||||| |||
Sbjct 709043 TCACGCTCTGGTGGATTGGCATCAAGTGGGTGGCAGGAGGACAG 709000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 903371054664800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |