Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq3478 212 6e-50 seq3522 123 2e-23 seq1157 113 4e-20 seq3467 89.7 5e-13 >seq3478 Length=3494213 Score = 212 bits (234), Expect = 6e-50 Identities = 975/1529 (64%), Gaps = 42/1529 (3%) Strand=Plus/Minus Query 148237 TCAGGTCATCGATCAGATACTGATTCACCACCTGAAACTCGCCGGCGAGCACGCGCCGCA 148296 ||||||| | || ||| | | || || | ||||||||| || | |||||| || || Sbjct 2084478 TCAGGTCTTTGAGCAGGTGGGGGTTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGG 2084419 Query 148297 GATACACGTTGCTCGTAAACGGTTCAAACGACTCGTTGTTGCCCAAAATCTGCGCGGTCG 148356 || | |||||| || | | || | |||||||||||||||| ||||| ||||| | Sbjct 2084418 TGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGG 2084359 Query 148357 TTGCCGTGGGCATGTACGCTACCAGCAGCGAGTTGCGCAAACCGCGATTTTT---TATTT 148413 ||||||||||| | | |||||| ||| | || ||| || ||| || | Sbjct 2084358 AGGCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCA---CGCCATGTTTGGCGATCT 2084302 Query 148414 TGCGCTTCAGAGCCGCCCAGTCCCAGAGCGGCGACGGTGTCACGTTCCACATGTCGTACT 148473 | |||||| | ||||||||| || || || ||| | |||||||||||||| Sbjct 2084301 TCTCCTTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACT 2084242 Query 148474 GCAGAATGCCGCGGCTAGCGGGGCTGCCCTCGTACGAGCTGTACGGTCCGTGCGCCGCCG 148533 | |||||||| || | || ||| ||||||| || | ||| || | || | Sbjct 2084241 GGAGAATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGAGCTCGGCGG 2084182 Query 148534 CCAGTTCGCAGCTCGCCTCGAGCGCGCCGTAGTAAATCGTCTCGGCAATTTGCCTGTTGA 148593 |||| ||||||||||| || | ||| | || || || ||||| || || |||||| Sbjct 2084181 CCAGCTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGATGTTGA 2084122 Query 148594 GCAGCGCCGCCGACTCGCTTTCGTACGGCATACGCAGCCGCACAAACGCGTCGGCAAGGC 148653 |||| ||| |||||| | || ||||| | | || || || || | | Sbjct 2084121 GCAGTTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAAGCATCAGCCAATC 2084062 Query 148654 CCTGTACGCCCACGCCAATGGGCCGGTGTTTAATGTTGGAGAGGCGCGCGCTCTCGAGCG 148713 |||| || || | || || |||| ||| ||||| || | || || | || Sbjct 2084061 CCTGGACCCCGATTCCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCG 2084002 Query 148714 GATAGTGGTTGCGGTCGATGATCTTG-TCAAGATTGCGCACCACCACCTTTGT-AATTCT 148771 | |||| |||| |||||| | |||| ||||| || | || | || || || | | Sbjct 2084001 GGTAGTAGTTGATGTCGATAACCTTGTTCAAG-TTCCTGACAATTACTTTGGTCACGGAT 2083943 Query 148772 GCGCAGCAATTCAAAATCGTA---CTTGTCATCTACGATGCATCGGTTCACGGCGATAGA 148828 || || || ||| || || | ||| || | | ||| | |||| ||| Sbjct 2083942 GC-CAATTTTTTAAAGTCATAAGTCCGCTCAGGGGTGACGTACATGTTGAGAGCGACAGA 2083884 Query 148829 GGCTAGATTGCACACGGCCGTCTCATCCGGGGCGCTGTACTCTACGATCTCGGCGCACAG 148888 ||| |||||||| || ||| ||| ||| | ||||||| ||||| || | ||| || Sbjct 2083883 GGCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAG 2083824 Query 148889 ATTGCTGCATTTGATCACGCCCACGTTCTTTTGATTGCTCTTGCTGTTGCACGCGTCCTT 148948 |||||||| ||||| ||||| |||| || |||||||| |||||||| || || || Sbjct 2083823 GTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTT 2083764 Query 148949 GTACAGCATGTACGGTCCGCCAGTTTCCACCTGCGTTTCCACTAT---GAACC---GATG 149002 ||| | ||||||||| || ||||| ||||| || | || ||| | || Sbjct 2083763 GTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCATAGCTG 2083704 Query 149003 CAGGTCCTGCGCGCGCACTTGCTGCTCGTAGCGACCCTCCTGCTCGTATAAAGTATACAG 149062 | | ||| | | ||| ||| | | | ||||||| ||| ||| || || || Sbjct 2083703 CTGAGCCTTCAC---CACACGCTTCAC---CCTCCCCTCCTTCTCATATCTGGTGTAGAG 2083650 Query 149063 CCGCTCGAACGCCTCGCCGTAGCAATCGTCGAGACCGGGGCACTTGTGCGGGCACATGAG 149122 || ||| |||| || |||| || || || |||||||| | | ||| ||||| || Sbjct 2083649 TTCTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAG 2083590 Query 149123 CGACCACACGCCGTCCGCGTACACGCGCTTCATAAACAGATCGGGCACCCAGAGCGCGTA 149182 ||||| | ||| | ||| |||||||| || || || || | ||| || ||||| Sbjct 2083589 GGACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTA 2083530 Query 149183 CATGAGGTCGCGCGCCTTGCAG-TCTTCGGCGCCCATGTTGCGGCGCAGGTTGAGCACGC 149241 | ||||| | | || || | || || ||| |||| ||| | || | | Sbjct 2083529 GAACAGGTC-CCTGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGT 2083471 Query 149242 TGAATATGTCCGCGTGCCACGGCTCAATGTACACCGCGAGCGCGCC----CTTGCGCTTG 149297 || | || |||||| ||||| | ||||| |||| ||||| ||| | ||| Sbjct 2083470 CAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTG-TTG 2083412 Query 149298 CCGCCCTGGTCGACGTGGCGCACCATGTTGT--TAAACACTCGAACCATAGGTTCAATGC 149355 || ||||| || || | ||| | |||||| ||||| ||| | ||| || | | | Sbjct 2083411 CCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTC--AACATTGGGACGAGCC 2083354 Query 149356 CACTGGCAGTGCCGTTAGTAGAGCTAATGCGACTGCCGCGCGCTCGCACTTTGTGCACGT 149415 | ||| | |||||| || | ||| || || | || | | || Sbjct 2083353 CGTTGGAACAGCCGTTGGTGCCGGCGATGTAGCTCCCCGTGGATCTAATGCAGCTGACTG 2083294 Query 149416 TGACGCCGATGCCGCCGCCGTACTTTGAGATGGCCGCGCAGTCGCCGAGCGTCGAGTAGA 149475 ||||| || || || | | || |||||| ||||| | ||||| ||||| Sbjct 2083293 CCACGCCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTTAGCGTGTCGTAGA 2083234 Query 149476 TGCCCTCGATGCTGTCGCGCTTCATGGTCAGCAGAAAGCACGAGCACATTTGCGGAAAAC 149535 | |||||||||||||| |||||||| ||||| ||||| | ||| ||||| Sbjct 2083233 TCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGT 2083174 Query 149536 GCGTGCCGGCCGCGAACATGGTGGGGCTGGCGTGTGTAAAATATTTCTGGCTCATCATCT 149595 || || || ||| | ||| ||| |||||| || || | |||| || || | Sbjct 2083173 TGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGT 2083114 Query 149596 CGTACGACTCGAGCACGCGGTCCATGTCATCGCCATGGATGCCTATGGCGACGCGCATCA 149655 ||| | ||||| || || || || || ||||| || | || || | ||| | Sbjct 2083113 TGTAGGTCTCGATGACTGCTTCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATGA 2083054 Query 149656 GCATATGCTGCGGTCGCTCCGCCACTTTGTTTCCA---ATTTTGAGCAAGTAGCCGTTTT 149712 |||| |||||||| ||||| || |||||| ||| || || |||| |||| | | Sbjct 2083053 GCATGTGCTGCGGACGCTCAGCTACTTTG---CCATTGATCTTTAGCAGGTAGGAGCGCT 2082997 Query 149713 CTAGTGTCTTGTAGCCAAAGTACTTGTAG 149741 | || |||||| |||||||| | |||||| Sbjct 2082996 CCAGAGTCTTGAAGCCAAAGAAGTTGTAG 2082968 >seq3522 Length=4083170 Score = 123 bits (136), Expect = 2e-23 Identities = 149/200 (75%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3191646 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 3191588 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||||||||| || ||||| ||||| || |||||| || Sbjct 3191587 CAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATCTTGGCCT 3191528 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| || || | Sbjct 3191527 TGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGG 3191468 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 3191467 TCTTCACGAAGATCTGCATG 3191448 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3190506 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 3190448 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| ||||||||| || || |||||||||||||| ||| || || Sbjct 3190447 CAGCAAAGATCAGCCTCTGCTGGTCAGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCT 3190388 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | ||| | |||||| ||||||| || || | ||||| ||| ||||| || || | Sbjct 3190387 TCACGTTCTCGATGGTGTCGCTGGGCTCAACCTCAAGGGTGATGGTCTTGCCAGTGAGCG 3190328 Query 133642 TTTTTACGAAAATCTGCATG 133661 |||| || || ||||||||| Sbjct 3190327 TTTTCACAAAGATCTGCATG 3190308 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3190962 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 3190904 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||||||||| || ||||| ||||| || ||| || || Sbjct 3190903 CAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCT 3190844 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| || || | Sbjct 3190843 TGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGG 3190784 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 3190783 TCTTCACGAAGATCTGCATG 3190764 Score = 120 bits (132), Expect = 3e-22 Identities = 148/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3191190 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 3191132 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||||||||| || ||||| ||||| || ||| || || Sbjct 3191131 CAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCT 3191072 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| ||||||| || || | ||||| ||| ||||| || || | Sbjct 3191071 TGACGTTCTCAATGGTGTCACTGGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGG 3191012 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 3191011 TCTTCACGAAGATCTGCATG 3190992 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3190734 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCTAGCTGCTTGC 3190676 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||||||||| || |||||||||||||| ||| || || Sbjct 3190675 CGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCT 3190616 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||||| || || | ||||| ||| ||||| || || | Sbjct 3190615 TCACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGG 3190556 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 3190555 TCTTCACGAAGATCTGCATG 3190536 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3191418 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCTAGCTGCTTGC 3191360 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||||||||| || |||||||||||||| ||| || || Sbjct 3191359 CGGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCTTCCTTGTCCTGGATTTTGGCCT 3191300 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 | | | |||| ||||| | ||||| || || | ||||| ||| ||||| || || | Sbjct 3191299 TCACGTTTTCAATTGTGTCACTTGGCTCAACCTCCAGGGTGATGGTCTTGCCAGTGAGGG 3191240 Query 133642 TTTTTACGAAAATCTGCATG 133661 | || ||||| ||||||||| Sbjct 3191239 TCTTCACGAAGATCTGCATG 3191220 Score = 114 bits (126), Expect = 1e-20 Identities = 147/200 (74%), Gaps = 2/200 (1%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGC 133521 ||||||||| ||||| || ||||| || | ||| | | | || || |||||||||| Sbjct 3219828 GGTGGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTGCGGCCA-TCTTCCAGCTGCTTGC 3219770 Query 133522 CCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCT 133581 | || | || |||| |||||||||||| || ||||| ||||| || ||| || || Sbjct 3219769 CAGCAAAGATCAGCCTCTGCTGGTCGGGGGGAATGCCCTCCTTATCCTGGATTTTGGCCT 3219710 Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641 ||| | ||||| ||||| ||||||| || |||| |||| ||| || || || || | Sbjct 3219709 TGACATTCTCAATGGTGTCACTGGGCTCAACCTCGAGAGTGATGGTCTTACCAGTTAGGG 3219650 Query 133642 TTTTTACGAAAATCTGCATG 133661 |||| || || ||||||||| Sbjct 3219649 TTTTCACAAAGATCTGCATG 3219630 >seq1157 Length=2784775 Score = 113 bits (124), Expect = 4e-20 Identities = 97/120 (81%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 148864 TGTACTCTACGATCTCGGCGCACAGATTGCTGCATTTGATCACGCCCACGTTCTTTTGAT 148923 |||||||||||||||| | ||||||||||||| ||||||| ||||| ||| | |||| Sbjct 2749613 TGTACTCTACGATCTCTGTGCACAGATTGCTGGATTTGATAGTGCCCAGGTTTTGCTGAT 2749554 Query 148924 TGCTCTTGCTGTTGCACGCGTCCTTGTACAGCATGTACGGTCCGCCAGTTTCCACCTGCG 148983 | ||||| |||||||| || |||||||| | |||||| ||| |||||||| ||||| Sbjct 2749553 TACTCTTTCTGTTGCAGGCATCCTTGTAAACCATGTATGGTGTACCAGTTTCTGTCTGCG 2749494 >seq3467 Length=3272559 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 120679 ATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATG 120738 || ||||||||| || |||||||||||||| | |||| || |||| | |||| ||| Sbjct 2318280 ATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTCAGCCAGAAGATG 2318221 Query 120739 GCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTC 120797 ||||| || ||||| ||||| | |||||||| ||||||||| |||| |||||| Sbjct 2318220 GCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGGCCACCACGCGCTC 2318162 Score = 89.7 bits (98), Expect = 5e-13 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 120679 ATCAGCTCGTTGCTAAACGTCAGGCCGGGCATGATGCCTTTCGTCTTGATGTAGAATATG 120738 || ||||||||| || |||||||||||||| | |||| || |||| | |||| ||| Sbjct 2328670 ATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTCAGCCAGAAGATG 2328729 Query 120739 GCGGCAAAGCTGCCCGAAAAGAACACGCCCTCCACGATGGCAAAGGCGACCATGCGCTC 120797 ||||| || ||||| ||||| | |||||||| ||||||||| |||| |||||| Sbjct 2328730 GCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGGCCACCACGCGCTC 2328788 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483399317988200