Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_024696.1 Length=180800 Score E Sequences producing significant alignments: (Bits) Value seq3033 105 8e-18 >seq3033 Length=6768404 Score = 105 bits (116), Expect = 8e-18 Identities = 239/354 (68%), Gaps = 9/354 (3%) Strand=Plus/Plus Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005 |||| ||| | || || || |||||| || |||||||| | ||||||| ||| | Sbjct 2484637 GCCAATTCCTTGGGCGAGCTGAAGTCGTCAACATGAATGAAGGAGTCTCCCTGGATAAAG 2484696 Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065 || |||||||||| || | || ||||| || | || || | || | | |||| Sbjct 2484697 TTCTCGTAATTCTGCCTGGGTGGGCCGAGAACCACTGGCACTGTCCCCAC--TGAGAGTG 2484754 Query 177066 CG--GTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGA 177123 | ||| ||||| || ||||| || || |||| | ||||||||||||||| ||||||| Sbjct 2484755 GGTTGTACAGTTTCTCAGTAATGTAATCTTTGTGGATGGAGTTCTCAAACGCCAGATAGA 2484814 Query 177124 ATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTAC 177181 | || ||| | ||| || || | | |||| | || | || || || || | | Sbjct 2484815 ACTTGCAGCTGGCGATGGT--GGGAAAGTAGTCTTGGTCAGAGATGTACTCCCCAAAGGC 2484872 Query 177182 GTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCAC 177241 | || ||| |||| | || |||||||| ||| || || ||| || | ||| Sbjct 2484873 CTGTCCATATGCATGAACCTCAATGTGTTTGTAGAGTTCATTATAATATTTCACCCGCAC 2484932 Query 177242 GTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGG 177295 ||| || | |||||| ||||| || | |||||||| | |||| | ||||| || Sbjct 2484933 GTGATCCTGGTTCCAGTTGCTTACAATCCAGCAAATCAGCTTG-TTTTTGCTGG 2484985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578406295928000