Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_024696.1
Length=180800
Score E
Sequences producing significant alignments: (Bits) Value
seq3033 105 8e-18
>seq3033
Length=6768404
Score = 105 bits (116), Expect = 8e-18
Identities = 239/354 (68%), Gaps = 9/354 (3%)
Strand=Plus/Plus
Query 176946 GCCAGTTCTATAGGGGACGTGTAGTCGTTCACGTGAATGAAAGCGTCTCCCGGGACGTAA 177005
|||| ||| | || || || |||||| || |||||||| | ||||||| ||| |
Sbjct 2484637 GCCAATTCCTTGGGCGAGCTGAAGTCGTCAACATGAATGAAGGAGTCTCCCTGGATAAAG 2484696
Query 177006 TTTTCGTAATTCTCTCTCGATGTTCCGAGTACTATGGGTACCGCACCTGCCATAAGAGAT 177065
|| |||||||||| || | || ||||| || | || || | || | | ||||
Sbjct 2484697 TTCTCGTAATTCTGCCTGGGTGGGCCGAGAACCACTGGCACTGTCCCCAC--TGAGAGTG 2484754
Query 177066 CG--GTAGAGTTTTTCGGTAATATAGTCCCTGTGTACGGAGTTCTCAAACGCGAGATAGA 177123
| ||| ||||| || ||||| || || |||| | ||||||||||||||| |||||||
Sbjct 2484755 GGTTGTACAGTTTCTCAGTAATGTAATCTTTGTGGATGGAGTTCTCAAACGCCAGATAGA 2484814
Query 177124 ATTTACAG--GAAGATAGTAGCGGGATGAAGTCATCATCGGGTATATAATCTCCTACTAC 177181
| || ||| | ||| || || | | |||| | || | || || || || | |
Sbjct 2484815 ACTTGCAGCTGGCGATGGT--GGGAAAGTAGTCTTGGTCAGAGATGTACTCCCCAAAGGC 2484872
Query 177182 GTTCCCGTATACATGTATATCTATGTGTTTACTGAGCTCTAGGTAGTATCTCGATCTCAC 177241
| || ||| |||| | || |||||||| ||| || || ||| || | |||
Sbjct 2484873 CTGTCCATATGCATGAACCTCAATGTGTTTGTAGAGTTCATTATAATATTTCACCCGCAC 2484932
Query 177242 GTGGTCGTTGTTCCAATTGCTGACGACCCAGCAAACTAACTTGCTCTTTGCGGG 177295
||| || | |||||| ||||| || | |||||||| | |||| | ||||| ||
Sbjct 2484933 GTGATCCTGGTTCCAGTTGCTTACAATCCAGCAAATCAGCTTG-TTTTTGCTGG 2484985
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578406295928000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |