Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq3522 98.7 7e-16 >seq3522 Length=4083170 Score = 98.7 bits (108), Expect = 7e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| | || | || || ||| ||| || || |||||||| || ||| Sbjct 3190535 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190476 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | |||||| || | || Sbjct 3190475 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 3190416 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||| ||||| ||||| |||| | | || | ||||||||| | || || Sbjct 3190415 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCA-CGTTCTCGATGGTGTCGCTGGGCTCAAC 3190357 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| || || || || | |||||| |||||||||||||| Sbjct 3190356 CTCAAGGGTGATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCAT 3190309 Score = 84.2 bits (92), Expect = 1e-11 Identities = 157/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| || | ||| | || | || || ||| ||| || || |||||||| || ||| Sbjct 3219857 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3219798 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || ||||| | || |||| || || || ||||| |||| | |||||| || | || Sbjct 3219797 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3219738 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCAC-GGTGTCGCTTGATTCCAC 33701 | || || || || ||||| || | ||| ||| |||||| || | || || Sbjct 3219737 ATGCCCTCCTTATCCTGGATTTTGGCCTTGA-CATTCTCAATGGTGTCACTGGGCTCAAC 3219679 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || | ||||| || ||||| |||| ||||| |||||||||||||| Sbjct 3219678 CTCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCAT 3219631 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328689758385600