Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3478 159 3e-34 >seq3478 Length=3494213 Score = 159 bits (176), Expect = 3e-34 Identities = 962/1515 (63%), Gaps = 56/1515 (4%) Strand=Plus/Minus Query 146893 TTGACCACTTGAAACTCGCCCGCCAGCACACGTCTGAGATACACATTGCTAGTGAAAGGC 146952 ||||| | |||||||| |||| ||||| || | | || | ||||| ||| | | | Sbjct 2084455 TTGACGATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCC 2084396 Query 146953 TCAAAAGACTCATTATTGCCTAATATTTGGGCCGTGGTTGCGGTAGGCATGTACGCCACC 147012 || | ||||| || ||||| | || ||||| |||| || || ||||| | || | Sbjct 2084395 TCGATGGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAGC 2084336 Query 147013 AACAATGAATTTCGCAGACCGTACGCACGGATGTTGTCCTTCAA-AGTTTGCCAGTCCCA 147071 | || || | || || | ||| || ||||||| || || ||||||||| Sbjct 2084335 AGCAGGCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTT-CCAGTCCCA 2084277 Query 147072 CATCGACGAGGGCGTCACGTTCCACATGTCGTACTGGAGCACTCCTCGACTGGCGGGACT 147131 || || |||||| | |||||||||||||||||| | || ||| | || Sbjct 2084276 CAGGTCCGTTGGCGTCTTCTCCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGA 2084217 Query 147132 GCCAGCGAACGTAGTGTAGCTTCCGTCGCGCTGCG-CCAATTCACAGCTTGCCTCGAGCG 147190 ||| || |||| ||| | ||| || | ||| ||| || ||||| || || | | Sbjct 2084216 GCCTTCGTACGTCTCATAGGTGCCGA-GCTCGGCGGCCAGCTCGCAGCTCGCTTCCAAAG 2084158 Query 147191 CTCCATAGTATATGGTTTCGGCGATTTGTTTGTTTAGGACGGTCGCTTCTTCGCTCTCGT 147250 | |||| || || || || ||| || |||| || | || || ||| || Sbjct 2084157 CGGCATAATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTTTCA- 2084099 Query 147251 AAGGCATA-CGCAGAAGCACAAAGGCATCGGCCAAACCCTGGATACCGACGCCGATAGGT 147309 |||| ||| |||| ||| | || ||||| ||||| ||||||| |||| || || || Sbjct 2084098 AAGGGATAACGCATAAGGATGAAAGCATCAGCCAATCCCTGGACCCCGATTCCTATCGGC 2084039 Query 147310 CGATGC----TTTTCGT--TGCTGCGCTTCGCGCTCGCTATGGGATAGTGGTTGCGATCA 147363 | || | |||| | ||| ||||| | | || |||| |||| || Sbjct 2084038 CTGTGGCGCATGTTCGACCTCCTG-GCTTCTTCCACC-----GGGTAGTAGTTGATGTCG 2083985 Query 147364 ATAATCTTGTTGAGGTTACGCACTACAACTTTAGTTATTGTTTTGAGTTTCTCGAAATCA 147423 |||| |||||| | ||| | || | ||||| || | | | | ||| | || ||| Sbjct 2083984 ATAACCTTGTTCAAGTTCCTGACAATTACTTTGGTCACGGATGCCAATTTTTTAAAGTCA 2083925 Query 147424 TAAGTCCCGTCTTCGAC-ACGTACGCATTGGTTCACGGCGATAGACGCCAGATTGCAGAC 147482 ||||||| || | |||||| || ||| | |||| ||| ||||||||||| || Sbjct 2083924 TAAGTCCGCTCAGGGGTGACGTAC--AT--GTTGAGAGCGACAGAGGCCAGATTGCAAAC 2083869 Query 147483 GGCCGTCTCTTCGGCGTCGCTGTACTGCACGATTTCGGCGCACAGGTTGCTGCATTTTAT 147542 ||| ||| || | |||||| |||||||| | ||| ||||||||||| || || Sbjct 2083868 CGCCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGAT 2083809 Query 147543 GACTCCCAAATTTTGCTGATTGCTTTTCCGATTGCACGCGTCTTTGAAGAGCATGTACGG 147602 | |||| ||| ||||| ||||| |||| ||||| || |||||| ||| ||||||||| Sbjct 2083808 GGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGG 2083749 Query 147603 TCCGCCGGTCTCGACTTGCGTTTCAACGAT---AAACCTATGCAGGTCCTGCGC--TC-G 147656 ||||| || |||| || | ||| | ||| || || | ||| || || Sbjct 2083748 CGTCCCGGTTTCTGTCTGCGACTCGATGATTGCATACC-AT--AGCTGCTGAGCCTTCAC 2083692 Query 147657 CACCCGCTGCCGATAGCGGCCCTCGTTTTCGTACCGCTCGTACAACCGCTCAAACTCGTC 147716 ||| |||| | | ||||| || || || | ||| | |||||||| || Sbjct 2083691 CACACGCTTC---ACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTC 2083635 Query 147717 GCCGTAGCAATCGGCAAGGCCGGGACACTGATGCGGACACATCAGCGACCACATGTCGTC 147776 || |||| || | || ||||| || | |||||||||||| ||||| ||| || Sbjct 2083634 CCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCA---GTCTTC 2083578 Query 147777 CGCGTT---AACGCGTCGCATAAACAGATCCGGCACCCACAGCGCGTACATAAGATCGC- 147832 ||| || || ||| || || || || | |||||| ||||| | || || | Sbjct 2083577 GTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCT 2083518 Query 147833 -GCGCTTTGCAATCCTCGGCGCCCATGTTGCGTTTCAAATTAAGCACGCTATAGATGTCG 147891 || | ||| ||||| ||| |||| |||| | || | | | | | ||| Sbjct 2083517 GGCTCGCTGC--TCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAGGAAGTCAAACACATCG 2083460 Query 147892 GCGTGCCAGGGTTCAATGTAGACGGCCAGCGCACC---TTTACGCTTTCCGCCCTGGTCG 147948 ||||||||| || | ||| | ||| | || || | | || || ||||| || Sbjct 2083459 AAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTGTTGCCCCCCTGATCA 2083400 Query 147949 ACATGGCGCACCATGTTGTTAAACACGCGCACCATGGGTTCCAGGCCGCTCGCAGTGCCG 148008 |||| ||| | ||||||| | || | || ||| || | || ||| | | | |||| Sbjct 2083399 ACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCG 2083340 Query 148009 TTGGTGGAATTGATCTTGCTGCCGCGGGCTCGCACTTCGTGCACGTTAACGCCAATGCCG 148068 |||||| ||| | ||| || || || | | || |||||||| || Sbjct 2083339 TTGGTGCCGGCGATGTAGCTCCCCGTGGATCTAATGCAGCTGACTGCCACGCCAATCCCT 2083280 Query 148069 CCGCCGTACTTTGATATGGCAGCGCAATCGCCCAA---TGTCGTGTAGATGCCGTCGATG 148125 || | | || || ||| ||||||| || | |||| |||||| || |||||| Sbjct 2083279 CCAGCTGATTTGGAGATGAGGGCGCAAT-GCTTTAGCGTGTC--GTAGATCCCCTCGATG 2083223 Query 148126 CTGTCGTTTTTGACGCCAAGCAAAAAACACGAACACATTTGCGGAATCCGCGTTCCCGCC 148185 ||||| | || | | | |||| || || ||| ||||| | ||||| || Sbjct 2083222 CTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCA 2083163 Query 148186 GAGAAAAGGGTGGGACTCGCGTGCGTAAACAATTTTTGACTCATCATGCGATACGTCTCA 148245 ||| ||||| || ||||| || ||| | || | || || | || ||||| Sbjct 2083162 TTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCTGACAGCAGGTTGTAGGTCTCG 2083103 Query 148246 ATAGCGTCTTCGATGT-CGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGCATGTGCTG 148304 || | ||||||| | |||| ||||| || |||| || || | ||||||||||||||| Sbjct 2083102 ATGACTGCTTCGATATCCGTC-CCGTGGATTCCCACAGCCACCCTCATGAGCATGTGCTG 2083044 Query 148305 TGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGGGTTTTGTA 148364 || || || || |||| |||||||| || || || || || || ||| | Sbjct 2083043 CGGACGCTCAGCTACTTTGCCATTGATCTTTAGCAGGTAGGAGCGCTCCAGAGTCTTGAA 2082984 Query 148365 ACCAAAGTACTTGTA 148379 |||||| | ||||| Sbjct 2082983 GCCAAAGAAGTTGTA 2082969 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476590020589800