Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_026141.2 Length=4988 Score E Sequences producing significant alignments: (Bits) Value seq3300 102 3e-18 seq2844 102 3e-18 seq325 98.7 3e-17 seq281 98.7 3e-17 seq2988 95.1 4e-16 seq48 87.8 6e-14 seq2532 80.6 8e-12 seq203 78.8 3e-11 >seq3300 Length=4147525 Score = 102 bits (112), Expect = 3e-18 Identities = 68/76 (89%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 2765 TATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTC 2824 ||| || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 146667 TATAGCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTC 146608 Query 2825 AACCCCGGGCTTCAGC 2840 | |||||| ||| || Sbjct 146607 GATCCCGGGTTTCGGC 146592 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 97455 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 97396 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 97395 CCGGGTTTCGGC 97384 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 151507 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 151448 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 151447 CCGGGTTTCGGC 151436 Score = 87.8 bits (96), Expect = 6e-14 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 2768 GGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAAC 2827 ||| ||| |||||||||||||| ||| |||||| |||||||| |||||||||||||| | Sbjct 149311 GGCCGAAATAGCTCAGTTGGGATAGCGTTAGACGGAAGATCTGAAGGTCCCTGGTTCGAT 149252 Query 2828 CCCGGGCTTCAGC 2840 |||||| ||| || Sbjct 149251 CCCGGGTTTCGGC 149239 >seq2844 Length=8921268 Score = 102 bits (112), Expect = 3e-18 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 2762 GTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGG 2821 |||| |||| ||| |||||||||||||||||| | ||||||||||||| ||||||||||| Sbjct 4584531 GTTTGTGGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGG 4584590 Query 2822 TTCAACCCCGGGCTTCAGC 2840 ||||| |||||| ||| || Sbjct 4584591 TTCAATCCCGGGTTTCGGC 4584609 Score = 95.1 bits (104), Expect = 4e-16 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2761 TGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820 ||||| | || ||| |||||||| ||||||||| | ||||||||||||| |||||||||| Sbjct 6548442 TGTTTGTTGCCGAAATAGCTCAGCTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTG 6548383 Query 2821 GTTCAACCCCGGGCTTCAGC 2840 |||||| |||||| ||| || Sbjct 6548382 GTTCAATCCCGGGTTTCGGC 6548363 Score = 95.1 bits (104), Expect = 4e-16 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| | ||||||||||||| |||||||||||||||| | Sbjct 6548784 GCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 6548725 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 6548724 CCGGGTTTCGGC 6548713 Score = 89.7 bits (98), Expect = 2e-14 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| ||||||||| |||||||| | ||||||||||||| |||||||||||||||| | Sbjct 4585473 GCCGAAATAGCTCAGTAGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTGGTTCAATC 4585414 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 4585413 CCGGGTTTCGGC 4585402 Score = 82.4 bits (90), Expect = 2e-12 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 2766 ATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCA 2825 || || ||| ||||||||||||||| || | ||||||||| ||| ||||||||||||||| Sbjct 4583150 ATAGCCGAAATAGCTCAGTTGGGAGCGCGTCAGACTGAAGCTCTGAAGGTCCCTGGTTCA 4583209 Query 2826 ACCCCGGGCTTCAGC 2840 | || ||| ||| || Sbjct 4583210 ATCCTGGGTTTCGGC 4583224 >seq325 Length=3959912 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 1746470 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 1746529 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 1746530 CCGGGTTTCGGC 1746541 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 3789234 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 3789175 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 3789174 CCGGGTTTCGGC 3789163 >seq281 Length=3866097 Score = 98.7 bits (108), Expect = 3e-17 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||||||||||||| |||||||||||||||||||||||||||||| | | Sbjct 2378722 GCCGAAATAGCTCAGTTGGGAGAGCGTTAGACTGAAGATCTAAAGGTCCCTGGTTCGATC 2378663 Query 2829 CCGGGCTTCAGC 2840 ||||| ||| || Sbjct 2378662 CCGGGTTTCGGC 2378651 >seq2988 Length=7258707 Score = 95.1 bits (104), Expect = 4e-16 Identities = 69/80 (86%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 2761 TGTTTATGGCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTG 2820 ||| | |||| ||| |||||||||||||||||| | ||||||||||||| |||||||||| Sbjct 5098675 TGTGTGTGGCCGAAATAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAAGGTCCCTG 5098616 Query 2821 GTTCAACCCCGGGCTTCAGC 2840 |||| | |||||| ||| || Sbjct 5098615 GTTCGATCCCGGGTTTCGGC 5098596 >seq48 Length=2406019 Score = 87.8 bits (96), Expect = 6e-14 Identities = 60/68 (88%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 ||||||||||||||||||||||||| ||| || | |||||||||||||||||||| || | Sbjct 73596 GCTGAAGTAGCTCAGTTGGGAGAGCGTTACACCGTAGATCTAAAGGTCCCTGGTTTAATC 73537 Query 2829 CCGGGCTT 2836 | ||| || Sbjct 73536 CTGGGGTT 73529 >seq2532 Length=830449 Score = 80.6 bits (88), Expect = 8e-12 Identities = 61/72 (85%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAACC 2828 || ||| |||||||| ||||||||| |||||||||||||||||||| |||| |||| | | Sbjct 829589 GCCGAAATAGCTCAGCTGGGAGAGCGTTAGACTGAAGATCTAAAGGACCCTAGTTCGATC 829648 Query 2829 CCGGGCTTCAGC 2840 | ||| ||| || Sbjct 829649 CTGGGTTTCGGC 829660 >seq203 Length=3319988 Score = 78.8 bits (86), Expect = 3e-11 Identities = 52/58 (90%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 2769 GCTGAAGTAGCTCAGTTGGGAGAGCATTAGACTGAAGATCTAAAGGTCCCTGGTTCAA 2826 || ||| |||||||||||||||||| | | ||||||||||| |||||||||||||||| Sbjct 3055173 GCCGAAATAGCTCAGTTGGGAGAGCGTCACACTGAAGATCTGAAGGTCCCTGGTTCAA 3055116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 15848983722975