Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_026440.1
Length=2243109
Score E
Sequences producing significant alignments: (Bits) Value
seq2944 194 2e-43
seq1379 190 3e-42
seq2908 176 6e-38
seq2388 176 6e-38
seq513 167 3e-35
seq3478 120 4e-21
seq3467 89.7 7e-12
>seq2944
Length=6283502
Score = 194 bits (214), Expect = 2e-43
Identities = 181/229 (79%), Gaps = 6/229 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 6113046 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 6112993
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | | |||||| |||
Sbjct 6112992 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCTCTGAGGCCTCCCGC 6112933
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 6112932 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 6112873
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCACCA 725142
|| | ||| ||| || ||||||| ||||||||| |||||||||||||
Sbjct 6112872 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCACCA 6112824
Score = 190 bits (210), Expect = 3e-42
Identities = 179/227 (79%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 6083568 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 6083515
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | | |||||| |||
Sbjct 6083514 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCTCTGAGGCCTCCCGC 6083455
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 6083454 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 6083395
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| |||||||||||
Sbjct 6083394 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 6083348
Score = 190 bits (210), Expect = 3e-42
Identities = 179/227 (79%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 6106864 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 6106811
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | | |||||| |||
Sbjct 6106810 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCTCTGAGGCCTCCCGC 6106751
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 6106750 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 6106691
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| |||||||||||
Sbjct 6106690 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 6106644
>seq1379
Length=720876
Score = 190 bits (210), Expect = 3e-42
Identities = 179/227 (79%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| ||||||||||||||| |||| |||| ||| |||| |||||
Sbjct 156407 TACAAGGTGCTGAAGCAGGTGCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 156460
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | | |||||| |||
Sbjct 156461 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCTCTGAGGCCTCCCGC 156520
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | | |||||||||||||||||||||
Sbjct 156521 CTGGCTCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCCGTGCGC 156580
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | ||| ||| || ||||||| ||||||||| |||||||||||
Sbjct 156581 CTCCTGCTGCCCGGTGAGCTGGCCAAGCACGCCGTGTCCGAGGGCAC 156627
>seq2908
Length=213623
Score = 176 bits (194), Expect = 6e-38
Identities = 176/227 (78%), Gaps = 5/227 (2%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| || |||||||| || |||||
Sbjct 4308 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCG---GGATCTCCTCCAA--AGGCCATG 4254
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||||||||||||||| |||| ||||||| ||||||| ||||
Sbjct 4253 AGCATCATGAACTCGTTTGTCAACGACATCTTCGAGCGCATCGCAGCCGAGGCATCTCGC 4194
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | |||||||||||||| ||||||
Sbjct 4193 CTGGCCCACTACAACAAGCGCTCCACCATCACTTCCAGGGAGATCCAGACCGCAGTGCGC 4134
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | | | ||| || ||||||| ||||||||| || ||||||||
Sbjct 4133 CTCCTTCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCAC 4087
>seq2388
Length=499105
Score = 176 bits (194), Expect = 6e-38
Identities = 176/227 (78%), Gaps = 5/227 (2%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| || |||||||| || |||||
Sbjct 452072 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCG---GGATCTCCTCCAA--AGGCCATG 452018
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||||||||||||||| |||| ||||||| ||||||| ||||
Sbjct 452017 AGCATCATGAACTCGTTTGTCAACGACATCTTCGAGCGCATCGCAGCCGAGGCATCTCGC 451958
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | |||||||||||||| ||||||
Sbjct 451957 CTGGCCCACTACAACAAGCGCTCCACCATCACTTCCAGGGAGATCCAGACCGCAGTGCGC 451898
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
|| | | | ||| || ||||||| ||||||||| || ||||||||
Sbjct 451897 CTCCTTCTCCCCGGTGAGCTGGCCAAGCACGCCGTGTCTGAGGGCAC 451851
>seq513
Length=2262107
Score = 167 bits (184), Expect = 3e-35
Identities = 174/227 (77%), Gaps = 6/227 (3%)
Strand=Plus/Minus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| ||| |||| |||||
Sbjct 731066 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCCTCCAAGGCCATG 731013
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||||||||| ||||||||||| |||| ||||||| | | |||||| |||
Sbjct 731012 AGCATCATGAACTCGTTCGTCAACGACATCTTCGAGCGCATCGCCTCTGAGGCCTCCCGC 730953
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | | |||||||||||||| || |||
Sbjct 730952 CTGGCCCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCAGTTCGC 730893
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | | | ||| || ||||||| |||||| || || ||||||||
Sbjct 730892 CTGCTTCTCCCCGGTGAGCTGGCCAAGCACGCAGTGTCTGAGGGCAC 730846
Score = 140 bits (154), Expect = 5e-27
Identities = 168/227 (74%), Gaps = 6/227 (3%)
Strand=Plus/Plus
Query 724914 TACAAGGTGCTCAAGCAGGTGCACCCCCGAACCGTTGGGCCATCCTCCAACAAGTCCATG 724973
||||||||||| |||||||| |||||| |||| |||| || ||| |||||
Sbjct 696023 TACAAGGTGCTGAAGCAGGTCCACCCCGACACCGG-----CATC-TCGTCTAAGGCCATG 696076
Query 724974 TCGATCATGAACTCGTTTGTCAACGACATGATCGACCGCATCGGCACCGAGGCCGGTCGC 725033
|||||||| ||||| ||||| ||||| |||| || |||| | | || ||| |||
Sbjct 696077 AGCATCATGAATTCGTTCGTCAATGACATCTTCGAGCGTATCGCCGCTGAAGCCTCCCGC 696136
Query 725034 CTGGCGCGCTCCAACAAGCGCAACACGATCGGCACGCGCGAGATCCAGACCGCCGTGCGC 725093
||||| | || |||||||||| ||| ||| | | | |||||||||||||| || |||
Sbjct 696137 CTGGCCCACTACAACAAGCGCTCCACCATCACCTCCAGGGAGATCCAGACCGCAGTTCGC 696196
Query 725094 CTGATCATGCGCGGCGAACTGGCCAGGCACGCCGTCTCCGAGGGCAC 725140
||| | | | ||| || ||||||| |||||| || || ||||||||
Sbjct 696197 CTGCTTCTCCCCGGTGAGCTGGCCAAGCACGCAGTGTCTGAGGGCAC 696243
>seq3478
Length=3494213
Score = 120 bits (132), Expect = 4e-21
Identities = 137/184 (74%), Gaps = 0/184 (0%)
Strand=Plus/Plus
Query 262915 CATGGCCTGCGCAACTCGTTGCTCGTGGCGCTCATGCCCACGGCCACGACGTCGCAGATC 262974
|||||| || | ||| |||| || | | |||||||||||| | || | ||||||
Sbjct 2084313 CATGGCGTGAGGAACAGCCTGCTGCTGTCCCCAATGCCCACGGCCTCCACCGCCCAGATC 2084372
Query 262975 CTGGGCAACACCGAGGCGTTCGAGGTCATCACGAGCAACATCTACACGCGCCGCGTGCTC 263034
|||||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||||
Sbjct 2084373 CTGGGCAACAACGAGTCCATCGAGGCCTACACAAGCAACATCTACACCCGCCGGGTGCTC 2084432
Query 263035 TCGGGCGACTTTACCGTGGTCAACCGCCACCTGGTCAAGCGCATGGTGGCGCGCGGCCTG 263094
||||| || ||| | ||||||| ||||||| |||| | || | | | ||||||
Sbjct 2084433 TCGGGGGAGTTTCAGATCGTCAACCCCCACCTGCTCAAAGACCTGACAGAGAGGGGCCTG 2084492
Query 263095 TGGA 263098
||||
Sbjct 2084493 TGGA 2084496
Score = 104 bits (114), Expect = 3e-16
Identities = 198/291 (68%), Gaps = 8/291 (3%)
Strand=Plus/Plus
Query 259896 TGTCGCAGCAGTTGTTCACCTCAGCGACGCCCACGCTCTTTAATGCCGGCACGCCGCGCC 259955
|||| || ||| ||||||| || | || || ||||| ||||| || || | |
Sbjct 2083120 TGTCAGAGAAGTGGTTCACCCACGCCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGC 2083179
Query 259956 CGCAGAATTCGTCGTGCTTTCTGTTGGACATGAAGGCCGATTCGATCGAGGGCATCTATG 260015
||||| || ||||| ||| | | |||||||| || |||||||| ||||| |
Sbjct 2083180 CGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGGATCTACG 2083239
Query 260016 ACACGCTCAAGCAGTGCGCGCTCATCTCCAAGGCGGCCGGCGGCATCGGTTTTGCCGCAC 260075
||||||| ||||| ||||| ||||||||||| | || || || || || | || |
Sbjct 2083240 ACACGCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGGAGGGATTGGCGTGGCAG--- 2083296
Query 260076 ACAAGGTGC----GCGCCGCGGGCGCCTACGTGGCGGGCACCAACGGCCAGTCCAACGGC 260131
|| ||| | || |||| |||| | || |||||||||||| ||||||||
Sbjct 2083297 -TCAGCTGCATTAGATCCACGGGGAGCTACATCGCCGGCACCAACGGCTGTTCCAACGGG 2083355
Query 260132 CTTGTGCCCATGCTTCGCGTTTTTAACGACACGGCGCGCTACGTCGACCAG 260182
|| || || ||| | | |||| ||| |||| ||||| || || || |||
Sbjct 2083356 CTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTATGTTGATCAG 2083406
Score = 89.7 bits (98), Expect = 7e-12
Identities = 107/143 (75%), Gaps = 2/143 (1%)
Strand=Plus/Plus
Query 262091 CAGATCTGGTCGGCCATTGTCGCGGCCCATATCGAGACCGGCACGCCCTACATGGTCTAC 262150
||| | |||| || || ||| | | || | || ||||| ||||| ||||||||||||
Sbjct 2083704 CAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTACATGGTCTAC 2083763
Query 262151 AAGGACGCCGTCAACCTGACCAGCAACCAGCAGAACCTGGGCACCACGACAGAG-GCCAA 262209
|| || ||| |||| || |||||||||||||| |||||||||| | || | |||
Sbjct 2083764 AAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCA-AGTGCAGCAA 2083822
Query 262210 CCTGTGCACCGAGATCGTCCAGT 262232
||| ||||| || |||||| |||
Sbjct 2083823 CCTCTGCACGGAAATCGTCGAGT 2083845
>seq3467
Length=3272559
Score = 89.7 bits (98), Expect = 7e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Plus
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| ||| | || || || | | ||||| || | || ||||| ||||||||||||
Sbjct 2317755 CGCTTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCAGATCGCC 2317814
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|| || ||||||||||| || | ||| || ||||||||||| ||| ||||||||||
Sbjct 2317815 ATGGAGAACATCCACTCAGAGATGTACAGCCTGCTGATCGACACGTACATCAAGGACCC 2317873
Score = 89.7 bits (98), Expect = 7e-12
Identities = 91/119 (76%), Gaps = 0/119 (0%)
Strand=Plus/Minus
Query 1455952 CGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAGATCGCC 1456011
||||| ||| | || || || | | ||||| || | || ||||| ||||||||||||
Sbjct 2329195 CGCTTCATGCAGGAAGTGCAGGTAACGGAGGCCCGGTGTTTCTACGGTTTCCAGATCGCC 2329136
Query 1456012 ATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAGGACCC 1456070
|| || ||||||||||| || | ||| || ||||||||||| ||| ||||||||||
Sbjct 2329135 ATGGAGAACATCCACTCAGAGATGTACAGCCTGCTGATCGACACGTACATCAAGGACCC 2329077
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7177468313715910
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