Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_026922.1
Length=157977
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 123 3e-23
seq3522 118 1e-21
>seq3478
Length=3494213
Score = 123 bits (136), Expect = 3e-23
Identities = 892/1430 (62%), Gaps = 32/1430 (2%)
Strand=Plus/Plus
Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583
|||| || | || ||||| ||| || || || || || |||||||| || | ||
Sbjct 2083004 CTACCTGCTAAAGATCAATGGCAAAGTAGCTGAGCGTCCGCAGCACATGCTCATGAGGGT 2083063
Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643
||| ||||| || ||||| || || || || | | | || || ||| | || ||||
Sbjct 2083064 GGCTGTGGGAATCCACGGGACGGATATCGAAGCAGTCATCGAGACCTACAACCTGCTGTC 2083123
Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703
||| ||| || ||||| || || ||| | || || || || ||| ||| ||
Sbjct 2083124 AGAGAAGTGGTTCACCCACGCCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGCCGCA 2083183
Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763
||||| || || |||| ||||| || ||||||||||| || || ||| ||||
Sbjct 2083184 GCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGGATCTACGACAC 2083243
Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGA 7823
||| |||||||| || ||||||| | || || || || || || | |
Sbjct 2083244 GCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGGAGGGATTGGCGTGGCAGTCAGCTG 2083303
Query 7824 CGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCC 7883
| | | ||| || ||| ||||| ||||||||| ||| ||| | | ||
Sbjct 2083304 CATTAGATCCACGGGGAGCTACATCGCCGGCACCAACGGCTGTTCCAACGGGCTCGTCCC 2083363
Query 7884 CATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAAGCGCAAA-- 7941
|||||| | || | ||| ||| | | ||| |||| || |||||||| || ||||
Sbjct 2083364 AATGTTGAGGGTTTACAACAACACAGCGCGTTATGTTGATCAGGGGGGCAA---CAAAAG 2083420
Query 7942 ----GGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAA 7997
|||||| ||||| || ||||||| |||||| || | | | | || |
Sbjct 2083421 ACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACTTCGATGTGTTTGACTTCCTGGA 2083480
Query 7998 TCTGCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGCGCGATCTATTCTTCGGATTGT 8056
||| |||| ||| || || |||| ||| | || || |||| || |||
Sbjct 2083481 GCTGAAGAAGAACACGGGAAAGGAGGAGCAGC-GAGCCAGGGACCTGTTCTACGCCCTGT 2083539
Query 8057 GGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCC 8116
|| | || || || || |||| ||| || | | ||| | | ||||| || ||||| |
Sbjct 2083540 GGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAACGAAGACTGGTCCCTGATGTGTC 2083599
Query 8117 CCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAAC 8176
| | ||||| | | | | || | |||||| || | ||||
Sbjct 2083600 CGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGAGGAGTTTGAAGAACTCTACACCA 2083659
Query 8177 AATACGAACACGA-CGGCGCGT---ACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGC 8232
||| || | || || | || |||| | ||||| || | | ||
Sbjct 2083660 GATATGAGAAGGAGGGGAGGGTGAAGCGTGTG----GTGAAGGCTCAGCAGCTATGGTAT 2083715
Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292
|| || ||||| | || | |||||||| | |||||||||| | |||||||| || |||
Sbjct 2083716 GCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTACATGGTCTACAAAGATGCCTGC 2083775
Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352
||| || ||||| || || |||||||||| |||||||| || ||| | |||
Sbjct 2083776 AACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGTGCAGCAACCTCTGCACGGAA 2083835
Query 8353 ATTGTACAGTACAGCGCGC-CCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411
|| || |||||| | || ||||| ||||| ||||||||||| || || || | |
Sbjct 2083836 ATCGTCGAGTACA-CTAGCAAGGACGAGGTGGCGGTTTGCAATCTGGCCTCTGTCGCTCT 2083894
Query 8412 AAACGCGTTCGTTGATCGACGCTCA-AACACTTACGACTTTGAACAATTGAAAAACGCCG 8470
||| || || || | || | ||||| |||||| || ||||| | |||
Sbjct 2083895 CAACATGTACG----TCACCCCTGAGCGGACTTATGACTTTAAAAAATTGGCA---TCCG 2083947
Query 8471 TG---CAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGG 8527
|| |||| | || | || || | | || || |||| | || || |||
Sbjct 2083948 TGACCAAAGTAATTGTCAGGAACTTGAACAAGGTTATCGACATCAACTACTACCCGGTGG 2084007
Query 8528 AAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGG 8587
||||||| | ||||||||||||||||| || | || | || || || || |||
Sbjct 2084008 AAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAGGAATCGGGGTCCAGGGATTGG 2084067
Query 8588 CCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACA 8647
| || || || | | |||| |||| ||||||| || || | |||||||||
Sbjct 2084068 CTGATGCTTTCATCCTTATGCGTTATCCCTTTGAAAGCCCCGAGGCTCAACTGCTCAACA 2084127
Query 8648 TAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAG 8707
| | || || || ||||||| | ||| || ||||| ||||| | || ||| |
Sbjct 2084128 TCCAGATCTTTGAGACTATGTATTATGCCGCTTTGGAAGCGAGCTGCGAGCTGGCCGCCG 2084187
Query 8708 AATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACG 8767
| | ||||| || || |||||| ||| || | || || || | || ||||
Sbjct 2084188 AGCTCGGCACCTATGAGACGTACGAAGGCTCGCCGGTGAGTAAGGGCATTCTCCAGTACG 2084247
Query 8768 ACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTG 8827
|||||||| | ||||| || ||||| | |||| |||| || || |
Sbjct 2084248 ACATGTGGGAGAAGACGCCAACGGACCTGTGGGACTGGAAGCTGCTGAAGGAGAAGATCG 2084307
Query 8828 CTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTC 8887
| || || || | || ||| || || | |||||||| ||| | || || |
Sbjct 2084308 CCAAACATGGCGTGAGGAACAGCCTGCTGCTGTCCCCAATGCCCACGGCCTCCACCGCCC 2084367
Query 8888 AAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937
| || |||| |||||||| ||| | ||| | | ||| | |||| | |||
Sbjct 2084368 AGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACAAGCAACATCTAC 2084417
>seq3522
Length=4083170
Score = 118 bits (130), Expect = 1e-21
Identities = 164/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| |||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 3219857 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3219798
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 3219797 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3219738
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || ||||| ||||| || | ||||| | || ||
Sbjct 3219737 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 3219678
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|||||||| ||||| ||||| |||| ||||| || || || ||||| ||
Sbjct 3219677 TCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCATGTT 3219628
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| |||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 3190763 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190704
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 3190703 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3190644
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || ||||| || || || | |||||| | || ||
Sbjct 3190643 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACC 3190584
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || ||||| || |||||
Sbjct 3190583 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190537
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| |||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 3191447 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191388
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 3191387 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191328
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || ||||| || || || | |||||| | || ||
Sbjct 3191327 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACC 3191268
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || ||||| || |||||
Sbjct 3191267 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191221
Score = 100 bits (110), Expect = 3e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| |||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 3190535 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190476
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| || || ||
Sbjct 3190475 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 3190416
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
|||||||| || || || ||||| || || || | |||||| | || ||
Sbjct 3190415 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACC 3190356
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716
|| || || ||||| || || || | ||||| || || || ||||| ||
Sbjct 3190355 TCAAGGGTGATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCATGTT 3190306
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| |||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 3190991 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190932
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 3190931 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3190872
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || ||||| ||||| || | ||||| | || ||
Sbjct 3190871 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3190812
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || ||||| || |||||
Sbjct 3190811 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190765
Score = 98.7 bits (108), Expect = 1e-15
Identities = 158/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| |||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 3191219 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191160
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 3191159 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191100
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || ||||| ||||| || | ||||| | || ||
Sbjct 3191099 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3191040
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || ||||| || |||||
Sbjct 3191039 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190993
Score = 95.1 bits (104), Expect = 1e-14
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546
|| || ||||| |||| || ||||| || ||||| ||||| || |||||||||||
Sbjct 3191675 CCACCCCTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191616
Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606
| |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| ||
Sbjct 3191615 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191556
Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666
||||| || || || || || || ||||| || | ||||| | || ||
Sbjct 3191555 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3191496
Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713
|| || || ||||| || || || | || || ||||| || |||||
Sbjct 3191495 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191449
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 505375941358600
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