Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_026922.1 Length=157977 Score E Sequences producing significant alignments: (Bits) Value seq3478 123 3e-23 seq3522 118 1e-21 >seq3478 Length=3494213 Score = 123 bits (136), Expect = 3e-23 Identities = 892/1430 (62%), Gaps = 32/1430 (2%) Strand=Plus/Plus Query 7524 CTACTTGTTGAAAATCAACGGCGAATGCGCGGAACGAATTCAACACATGCTGTTGCGCGT 7583 |||| || | || ||||| ||| || || || || || |||||||| || | || Sbjct 2083004 CTACCTGCTAAAGATCAATGGCAAAGTAGCTGAGCGTCCGCAGCACATGCTCATGAGGGT 2083063 Query 7584 GGCGGTGGGCATTCACGGCGAAGACATTGACGCCGCCTTGGAAACGTACCAAATGATGTC 7643 ||| ||||| || ||||| || || || || | | | || || ||| | || |||| Sbjct 2083064 GGCTGTGGGAATCCACGGGACGGATATCGAAGCAGTCATCGAGACCTACAACCTGCTGTC 2083123 Query 7644 TTTGAAACAGTTTACGCACGCTTCGCCCACCATGTTTGCCGCGGGCACAAACGCGCCTCA 7703 ||| ||| || ||||| || || ||| | || || || || ||| ||| || Sbjct 2083124 AGAGAAGTGGTTCACCCACGCCTCCCCGACCCTCTTCAATGCTGGAACCAACAGGCCGCA 2083183 Query 7704 ATTGTCCTCGTGTTTTTTGCTAACCATGCGCGAAGACAGCATCGACGGCATTTACAACAC 7763 ||||| || || |||| ||||| || ||||||||||| || || ||| |||| Sbjct 2083184 GCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGACAGCATCGAGGGGATCTACGACAC 2083243 Query 7764 GCTGCGCGATTGCGCCAATATTTCCAAATACGGCGGCGGAATAGGTCTGAACGTAAACGA 7823 ||| |||||||| || ||||||| | || || || || || || | | Sbjct 2083244 GCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGGAGGGATTGGCGTGGCAGTCAGCTG 2083303 Query 7824 CGTGCGCGCCAACGGTAGCCGCATCGTGTCCACCAACGGAAAAGCCAGCGGTTTAGAGCC 7883 | | | ||| || ||| ||||| ||||||||| ||| ||| | | || Sbjct 2083304 CATTAGATCCACGGGGAGCTACATCGCCGGCACCAACGGCTGTTCCAACGGGCTCGTCCC 2083363 Query 7884 CATGTTGCGCGTGTTCAATAACGCGGTGCGACATGTAGACCAGGGGGGAAAGCGCAAA-- 7941 |||||| | || | ||| ||| | | ||| |||| || |||||||| || |||| Sbjct 2083364 AATGTTGAGGGTTTACAACAACACAGCGCGTTATGTTGATCAGGGGGGCAA---CAAAAG 2083420 Query 7942 ----GGCGCCGCTGCCATCTATTTGGAGCCGTGGCACGCGGACATTTACGCAGTGCTAAA 7997 |||||| ||||| || ||||||| |||||| || | | | | || | Sbjct 2083421 ACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCACTTCGATGTGTTTGACTTCCTGGA 2083480 Query 7998 TCTGCGTCGCAACATGGGTTGCGAAGA-CAGCAAAGCGCGCGATCTATTCTTCGGATTGT 8056 ||| |||| ||| || || |||| ||| | || || |||| || ||| Sbjct 2083481 GCTGAAGAAGAACACGGGAAAGGAGGAGCAGC-GAGCCAGGGACCTGTTCTACGCCCTGT 2083539 Query 8057 GGGTGCCCGATCTGTTTATGAGGCGCGTTCATTTCGACGCACAATGGTCGCTCATGTGCC 8116 || | || || || || |||| ||| || | | ||| | | ||||| || ||||| | Sbjct 2083540 GGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAACGAAGACTGGTCCCTGATGTGTC 2083599 Query 8117 CCGATCGTTGCCCTTTATTAAAAAACGTTTACGGTTCAAAATTTGAACAATTGTACAAAC 8176 | | ||||| | | | | || | |||||| || | |||| Sbjct 2083600 CGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGAGGAGTTTGAAGAACTCTACACCA 2083659 Query 8177 AATACGAACACGA-CGGCGCGT---ACGTGCGGCAAGTGAAAGCGCGCGACCTGCACCGC 8232 ||| || | || || | || |||| | ||||| || | | || Sbjct 2083660 GATATGAGAAGGAGGGGAGGGTGAAGCGTGTG----GTGAAGGCTCAGCAGCTATGGTAT 2083715 Query 8233 GCCATTATCGAATGTCAAAACGAAACCGGTATGCCGTACATGCTGTACAAAGACGCTTGC 8292 || || ||||| | || | |||||||| | |||||||||| | |||||||| || ||| Sbjct 2083716 GCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTACATGGTCTACAAAGATGCCTGC 2083775 Query 8293 AACGCCAAAAGCAATCAAAGCAACGTGGGCACCATTTGTTGCAGCAATCTGTGCGCTGAA 8352 ||| || ||||| || || |||||||||| |||||||| || ||| | ||| Sbjct 2083776 AACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAGTGCAGCAACCTCTGCACGGAA 2083835 Query 8353 ATTGTACAGTACAGCGCGC-CCGACGAAGTGGCCGTTTGCAATCTAGCGTCGGTGTGTTT 8411 || || |||||| | || ||||| ||||| ||||||||||| || || || | | Sbjct 2083836 ATCGTCGAGTACA-CTAGCAAGGACGAGGTGGCGGTTTGCAATCTGGCCTCTGTCGCTCT 2083894 Query 8412 AAACGCGTTCGTTGATCGACGCTCA-AACACTTACGACTTTGAACAATTGAAAAACGCCG 8470 ||| || || || | || | ||||| |||||| || ||||| | ||| Sbjct 2083895 CAACATGTACG----TCACCCCTGAGCGGACTTATGACTTTAAAAAATTGGCA---TCCG 2083947 Query 8471 TG---CAAGTGACGGTACGCAATTTAGATCGCATCATTGATGTCAATTTTTATCCCTTGG 8527 || |||| | || | || || | | || || |||| | || || ||| Sbjct 2083948 TGACCAAAGTAATTGTCAGGAACTTGAACAAGGTTATCGACATCAACTACTACCCGGTGG 2084007 Query 8528 AAGAAGCGCGCGTATCGAACATGCGCCACAGACCCGTTGGCGTGGGCGTGCAAGGTCTGG 8587 ||||||| | ||||||||||||||||| || | || | || || || || ||| Sbjct 2084008 AAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAGGAATCGGGGTCCAGGGATTGG 2084067 Query 8588 CCGACGCGTTTGCCATGTTGCGCCTCCCCTACGAAAGCCAAGAAGCGCGCATGCTCAACA 8647 | || || || | | |||| |||| ||||||| || || | ||||||||| Sbjct 2084068 CTGATGCTTTCATCCTTATGCGTTATCCCTTTGAAAGCCCCGAGGCTCAACTGCTCAACA 2084127 Query 8648 TAAAAATAGCGGAAACGGTGTATTACGGCGCATTAGAAGCCAGCTGTCAACTTGCCCGAG 8707 | | || || || ||||||| | ||| || ||||| ||||| | || ||| | Sbjct 2084128 TCCAGATCTTTGAGACTATGTATTATGCCGCTTTGGAAGCGAGCTGCGAGCTGGCCGCCG 2084187 Query 8708 AATTGGGCACGTACGAATCGTACGCGGGCAGCCCTGCCAGCCGCGGAATATTGCAATACG 8767 | | ||||| || || |||||| ||| || | || || || | || |||| Sbjct 2084188 AGCTCGGCACCTATGAGACGTACGAAGGCTCGCCGGTGAGTAAGGGCATTCTCCAGTACG 2084247 Query 8768 ACATGTGGAATGTCACGCCCACCTCTTTGTGGAATTGGAGCGATTTGAAACGCAAAATTG 8827 |||||||| | ||||| || ||||| | |||| |||| || || | Sbjct 2084248 ACATGTGGGAGAAGACGCCAACGGACCTGTGGGACTGGAAGCTGCTGAAGGAGAAGATCG 2084307 Query 8828 CTCAATTCGGTTTGCGCAATTCGCTGTTGGTGGCTTACATGCCCACCGCCACGACTGCTC 8887 | || || || | || ||| || || | |||||||| ||| | || || | Sbjct 2084308 CCAAACATGGCGTGAGGAACAGCCTGCTGCTGTCCCCAATGCCCACGGCCTCCACCGCCC 2084367 Query 8888 AAATAATGGGAAACAACGAATCCTTTGAGCCGTTCACCAACAACGTGTAC 8937 | || |||| |||||||| ||| | ||| | | ||| | |||| | ||| Sbjct 2084368 AGATCCTGGGCAACAACGAGTCCATCGAGGCCTACACAAGCAACATCTAC 2084417 >seq3522 Length=4083170 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 3219857 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3219798 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 3219797 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3219738 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || ||||| ||||| || | ||||| | || || Sbjct 3219737 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACATTCTCAATGGTGTCACTGGGCTCAACC 3219678 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 |||||||| ||||| ||||| |||| ||||| || || || ||||| || Sbjct 3219677 TCGAGAGTGATGGTCTTACCAGTTAGGGTTTTCACAAAGATCTGCATGTT 3219628 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 3190763 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190704 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 3190703 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3190644 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || ||||| || || || | |||||| | || || Sbjct 3190643 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACC 3190584 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || ||||| || ||||| Sbjct 3190583 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190537 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 3191447 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191388 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 3191387 AGGGTGCGGCCATCTTCTAGCTGCTTGCCGGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191328 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || ||||| || || || | |||||| | || || Sbjct 3191327 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTTTCAATTGTGTCACTTGGCTCAACC 3191268 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || ||||| || ||||| Sbjct 3191267 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191221 Score = 100 bits (110), Expect = 3e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 3190535 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190476 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||| || || || Sbjct 3190475 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCAGGGGGA 3190416 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 |||||||| || || || ||||| || || || | |||||| | || || Sbjct 3190415 ATGCCTTCCTTGTCCTGGATTTTGGCCTTCACGTTCTCGATGGTGTCGCTGGGCTCAACC 3190356 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCATTTT 134716 || || || ||||| || || || | ||||| || || || ||||| || Sbjct 3190355 TCAAGGGTGATGGTCTTGCCAGTGAGCGTTTTCACAAAGATCTGCATGTT 3190306 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 3190991 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3190932 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 3190931 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3190872 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || ||||| ||||| || | ||||| | || || Sbjct 3190871 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3190812 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || ||||| || ||||| Sbjct 3190811 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190765 Score = 98.7 bits (108), Expect = 1e-15 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 3191219 CCACCCCTGAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191160 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 3191159 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191100 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || ||||| ||||| || | ||||| | || || Sbjct 3191099 ATGCCCTCCTTATCCTGGATTTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3191040 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || ||||| || ||||| Sbjct 3191039 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3190993 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 134487 CCTCCTCTGAGTCGCAACACGAGGTGTAGCGTGGATTCCTTTTGAATGTTGTAGTCGCCA 134546 || || ||||| |||| || ||||| || ||||| ||||| || ||||||||||| Sbjct 3191675 CCACCCCTGAGACGCAGAACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGAG 3191616 Query 134547 ACGGTGTGAGAGTCGTCGAGCTGTTTGCCTGCAAAAATCAAACGCTGCTGATCGGGCGGT 134606 | |||| | || || ||||| ||||| ||||| |||| | |||||| ||||| || Sbjct 3191615 AGGGTGCGGCCATCTTCCAGCTGCTTGCCAGCAAAGATCAGCCTCTGCTGGTCGGGGGGA 3191556 Query 134607 ATGCCTTCTTTTTCTTGAATTTTTTGTTTGACCGCGTCCAATGTGTCGGACGATTCCACG 134666 ||||| || || || || || || ||||| || | ||||| | || || Sbjct 3191555 ATGCCCTCCTTATCCTGGATCTTGGCCTTGACGTTCTCAATGGTGTCACTGGGCTCAACC 3191496 Query 134667 TCGAGAGTAATGGTTTTACCGGTTAAAGTTTTAACGAAAATTTGCAT 134713 || || || ||||| || || || | || || ||||| || ||||| Sbjct 3191495 TCCAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 3191449 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505375941358600