Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_028091.1
Length=196300
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 208 1e-48
>seq3478
Length=3494213
Score = 208 bits (230), Expect = 1e-48
Identities = 959/1494 (64%), Gaps = 48/1494 (3%)
Strand=Plus/Minus
Query 110614 CTTCATATCCTTGGACCAGAGACCAATCTTCTTGAGGTCATTGACGAGGTGCTTGTTGAC 110673
|||||| |||| ||| || || ||| | ||||| |||| ||||| ||||||
Sbjct 2084510 CTTCATCTCCTCATTCCACAGGCCCCTCTCTGTCAGGTCTTTGAGCAGGTGGGGGTTGAC 2084451
Query 110674 AATGACAAACTCACCTGCGAGGGTTCTTCTCAGGTAGATGTTTGTTGTGTATGGTTCAAA 110733
|| |||||| || | ||| | | ||||||||| ||||||| | || |
Sbjct 2084450 GATCTGAAACTCCCCCGAGAGCACCCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCGAT 2084391
Query 110734 GCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCATCAAAAG 110793
| | || || || |||| ||| || ||||||||||| || |||||||| | || || ||
Sbjct 2084390 GGACTCGTTGTTGCCCAGGATCTGGGCGGTGGAGGCCGTGGGCATTGGGGACAGCAGCAG 2084331
Query 110794 ACTGTTACGAAGACCCTTCTCCTTGATGCGTTCCTTGAGAACATCCCAGTCGTAGTTGAG 110853
||||| | | || | | ||| ||||| || | | |||||| | |
Sbjct 2084330 GCTGTTCCTCACGCCATGTTTGGCGATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTC 2084271
Query 110854 C-TTGGTTTCACCTTCCCACATGTCAAACTGAAGCACCCCTTGGGACGCGGGAGAACCCT 110912
| |||| || || |||||||||| |||| || | || | | | || || || |
Sbjct 2084270 CGTTGGCGTCTTCT-CCCACATGTCGTACTGGAGAATGCCCTTACTCACCGGCGAGCCTT 2084212
Query 110913 CAAAGGTTTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTCCAGGGATGCGT 110972
| | || ||||||| || | | | |||| || |||||||| |||| | || |
Sbjct 2084211 CGTACGTCTCATAGGTGCCGAGCTCGGCGGCCAGCTCGCAGCTCGCTTCCAAAGCGGCAT 2084152
Query 110973 GATACATGGTTTCAAAGATACG-------AGCA-TTCATCTCCTTGGCTTCATCTGAATC 111024
|||||| || |||||||| | |||| || | | | ||||| ||
Sbjct 2084151 AATACATAGTCTCAAAGATCTGGATGTTGAGCAGTTGAGCCTCGGGGCTT--------TC 2084100
Query 111025 AAATGCGTAGCGGCACAAA-ATAAATACATCCGCGAGACCTTGAACACCCAAACCAATAG 111083
||| | || || || || || || |||| || | || || || || | || || |
Sbjct 2084099 AAAGGGATAACG-CATAAGGATGAAAGCATCAGCCAATCCCTGGACCCCGATTCCTATCG 2084041
Query 111084 GTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAATGA 111143
| ||||| ||||| || ||| | | || || || || || | || |||| || |
Sbjct 2084040 GCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTCCACCGGGTAGTAGTTGATGTCGATAA 2083981
Query 111144 CTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTC--ATGA-AGTTTTTCATAATCAA 111200
| ||| | || || ||||| | || | | ||| | ||||| | | |||
Sbjct 2083980 CCTTGTTCAAGTTCCTG---ACAATTACTTTGGTCACGGATGCCAATTTTTTAAAGTCAT 2083924
Query 111201 AAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAACAG 111260
|||| || ||| |||| ||| | || |||| || |||| ||||||||| |
Sbjct 2083923 AAGTCCG---CTCAGGGGTGACGTACATGTTGAGAGCGACAGAGGCCAGATTGCAAACCG 2083867
Query 111261 CCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACATAAGTTGGAACTCTTAATCG 111320
|| ||| ||||| |||||||| | ||||| || || | |||| | ||| || |
Sbjct 2083866 CCACCTCGTCCTTGCTAGTGTACTCGACGATTTCCGTGCAGAGGTTGCTGCACTTGATGG 2083807
Query 111321 TCCCCAAATTCTTTTGGTTACTCTTCTTGTTGCACGCATCCTTGTAGAGCATGTAGGGCG 111380
| |||| ||||| ||||| |||||| ||||||| ||||| ||||||| |||||| ||||
Sbjct 2083806 TGCCCAGATTCTGCTGGTTGCTCTTCCTGTTGCAGGCATCTTTGTAGACCATGTACGGCG 2083747
Query 111381 TCCCCGTCTCCGTCTGTGATTTGAGAATAGCCTTCCAAACAT-CGGCGGCTGGTACAATG 111439
|||| || || ||||| || | || || || | ||| | | | | | || ||
Sbjct 2083746 TCCCGGTTTCTGTCTGCGACTCGATGATTGCATACCATAGCTGCTGAGCCTTCACCACAC 2083687
Query 111440 GCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACCCACC 111499
|| || ||| |||||| ||| || | |||||||| ||||||||||||| ||| |
Sbjct 2083686 GC-TTCACCCTCCCCTCCTTCTCATATCTGGTGTAGAGTTCTTCAAACTCCTCCCCC-CA 2083629
Query 111500 GCG-TCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCTTCCTC 111558
|| || || || || | | | ||||| | || ||||| | | | |||
Sbjct 2083628 GCACTCATCCAGCCCGGGGCAGTCGGCCGGACACATCAGGGACCAGTCTTCGTTGTTCTC 2083569
Query 111559 AACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCGAGC 111618
|||||||||||||| ||||| || |||||||||| | || || || || ||
Sbjct 2083568 CACCCGCTTCATGAAGAGGTCAGGGATCCACAGGGCGTAGAACAGGTCCCTGGCTCGCTG 2083509
Query 111619 CTCTTCGTCACCTTGGTTGAGTCGT-AACTCAAGGAACTCCATGATATCCGCGTGCCATG 111677
||| || | || ||| || | | ||| ||||| || | | ||| |||||| |
Sbjct 2083508 CTCCTCCTTTCCCGTGTT-CTTCTTCAGCTCCAGGAAGTCAAACACATCGAAGTGCCAGG 2083450
Query 111678 GCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATTTACATAGCGC 111733
|||| || || | |||| | || |||| | |||| | |||| ||||| |||
Sbjct 2083449 GCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTTGTTGCCC-CCCTGATCAACATAACGC 2083391
Query 111734 GCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCC 111793
|||||| ||| | || | | |||||| | | || | || || || || ||
Sbjct 2083390 GCTGTGTTGTTGTAAACCCTCAACATTGGGACGAGCCCGTTGGAACAGCCGTTGGTGCCG 2083331
Query 111794 CGAATACGAGAT-TTATTGGCTCTCA--CATCATGGATGTGCATCCCAATACCCCCAGCC 111850
|| || | ||| ||| | || | || || || ||||| || |||||
Sbjct 2083330 GCGAT-GTAGCTCCCCGTGGATCTAATGCAGC-TGACTG-CCACGCCAATCCCTCCAGCT 2083274
Query 111851 CACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCC 111910
| || ||||| | || || | | | || || | ||||| || | ||| ||| |||
Sbjct 2083273 GATTTGGAGATGAGGGCGCAATGCTTTAGCGTGTCGTAGATCCCCTCGATGCTGTCATCC 2083214
Query 111911 TTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGG 111970
|| |||||| |||||||| ||||||| |||||| || || |||||||||||||||
Sbjct 2083213 TTCATGGCGAGCAGGAAGCAGCTGGACAGCTGCGGCCTGTTGGTTCCAGCATTGAAGAGG 2083154
Query 111971 GTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGA 112029
|| || | ||||| ||||| || | | |||| | || ||| ||||| | ||| |
Sbjct 2083153 GTCGGGGAGGCGTGGGTGAAC-CACTTCTCTGACAGCAGGTTGTAGGTCTCGATGACTGC 2083095
Query 112030 ATCAATGTCTTCCCCGTGGATGCCGATTGCGACCCGCATGAACATGTACTGTGG 112083
|| || || ||||||||| || | || |||| ||||| ||||| ||| ||
Sbjct 2083094 TTCGATATCCGTCCCGTGGATTCCCACAGCCACCCTCATGAGCATGTGCTGCGG 2083041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 628004091828000
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