Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_028093.1
Length=182309
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 161 1e-34
seq3467 87.8 2e-12
seq1157 86.0 7e-12
>seq3478
Length=3494213
Score = 161 bits (178), Expect = 1e-34
Identities = 943/1486 (63%), Gaps = 32/1486 (2%)
Strand=Plus/Plus
Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281
|| ||| ||||| ||||| | ||||| | || || || ||| || || || | |||
Sbjct 2083041 CCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGGGACGGATATCGAAGCAGTC 2083100
Query 104282 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 104340
| ||||| ||| || | |||| | | || ||||| ||||| | || ||||||||
Sbjct 2083101 ATCGAGACCTACAACCTGCTGTCAGAGAAGTG-GTTCACCCACGCCTCCCCGACCCTCTT 2083159
Query 104341 CAATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 104400
||||||||| || || || || ||||||| |||||||| |||||| ||||| ||
Sbjct 2083160 CAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 2083219
Query 104401 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 104460
| ||| | || ||||| | || || | | | || || | ||||| || | |||||
Sbjct 2083220 CAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGG 2083279
Query 104461 GGGTATTGGGATGCACATCCATGATG--TGAGAGCCAATAA-ATCTCGTATTCGGGGGAC 104517
|| ||||| || || || | || | ||| ||| | || || || ||
Sbjct 2083280 AGGGATTGGCGTGG-CAGTCA-GCTGCATTAGATCCACGGGGAGCTAC-ATCGCCGGCAC 2083336
Query 104518 AAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTA 104577
|| || || | || | | |||||| | | || | ||| ||||||||| ||
Sbjct 2083337 CAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTA 2083396
Query 104578 TGTAAATCAAGCTGGGCGTCGAAAG----GGATCTATCGCAGTCTATCTTGAGCCATGGC 104633
||| |||| | |||| | |||| || | |||| | || || ||||| ||||
Sbjct 2083397 TGTTGATCAGGG-GGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGC 2083455
Query 104634 ACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGT 104693
|| ||| | | || ||||| ||| || ||| || | |||||| |||
Sbjct 2083456 ACTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAG 2083515
Query 104694 GCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGA 104753
| | || || |||| ||| || ||||| || || |||||||||||| | || ||| | |
Sbjct 2083516 CCAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACA 2083575
Query 104754 GTGGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGA-TGCCGTGGGT 104812
| | ||||| || | ||||| | | | || || || || ||| | |||
Sbjct 2083576 ACGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTG-GGGG 2083634
Query 104813 GAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCG-ACGGT 104871
||||||||||||| || ||||| | || ||| | || || ||| || ||| |||
Sbjct 2083635 GAGGAGTTTGAAGAACTCTACACCAGATATGAGAAGGAGGGGAGGGTGA-AGCGTGTGGT 2083693
Query 104872 GCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATA 104931
| ||| | | ||| | || || || |||| || || || || || || || ||
Sbjct 2083694 GAAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTA 2083753
Query 104932 CATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAA 104991
|||| | |||||||| ||||| ||| ||||| || || ||||| |||| |||||
Sbjct 2083754 CATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAA 2083813
Query 104992 GAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGACGGCTGTGTG 105051
| | ||| ||||| || |||||| | || | || ||| || ||| ||| || ||
Sbjct 2083814 GTGCAGCAACCTCTGCACGGAAATCGTCGAGTACACTAGCAAGGACGAGGTGGCGGTTTG 2083873
Query 105052 TAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATCCAGAGACAAAGACATTTGATTA 105111
|| || || || |||||||| || ||| || || ||| ||| | ||| |
Sbjct 2083874 CAATCTGGCCTCTGTCGCTCTCAACATGTACGTCACCCCTGAG---CGGACTTATGACTT 2083930
Query 105112 TGAAAAACTCCACGAAGTTACGAA---AACTGTCACCAAAAACCTAAACAGAGTTATTGA 105168
| ||||| | || || || || ||| || ||| | |||| ||||| ||
Sbjct 2083931 TAAAAAATTGGCATCCGTGACCAAAGTAATTGT---CAGGAACTTGAACAAGGTTATCGA 2083987
Query 105169 TAGAAATTTTTACCCCGTTGAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGG 105228
| || | ||||| || || || | | || || ||| | ||| | || || ||
Sbjct 2083988 CATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAGG 2084047
Query 105229 TCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGA 105288
|||| || ||||| | || |||| ||||| ||| || | | ||||| |
Sbjct 2084048 AATCGGGGTCCAGGGATTGGCTGATGCTTTCATCCTTATGCGTTATCCCTTTGAAAGCCC 2084107
Query 105289 CGAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGC 105348
||| || | |||| | || |||||||| |||||| | |||||| | || ||
Sbjct 2084108 CGAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTATGCCGCTTTGGAAGC 2084167
Query 105349 GAGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTC 105408
||| | ||| |||| | | || | ||||| || | || || || || | |
Sbjct 2084168 GAGCTGCGAGCTGGCCGCCGAGCTCGGCACCTATGAGACGTACGAAGGCTCGCC-GGTGA 2084226
Query 105409 ACAAGGG-GTGCTTCAATTTGATATGTGGGAAGGTGAGACCAA-GCTTCACTACGACTGG 105466
||||| | || || | || ||||||| || || |||| | | | |||| |
Sbjct 2084227 GTAAGGGCATTCTCCAGTACGACATGTGGG-AGAAGACGCCAACGGACCTGTGGGACT-G 2084284
Query 105467 GAAGCT-CTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCC 105525
|||||| || ||||| ||| | | || | | ||||| || || || | ||
Sbjct 2084285 GAAGCTGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTGCTGTCCCC 2084344
Query 105526 AATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACAC 105585
|||||| || ||||||||||| || ||| |||| || || || | | | || |||||||
Sbjct 2084345 AATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTACAC 2084404
Query 105586 GACGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAACAAGCATCT 105645
| |||||||| | | ||| |||| |||||| ||| |||||| || ||
Sbjct 2084405 AAGCAACATCTACACCCGCCGGGTGCTCTCGGGGGAGTTTCAGATCGTCAACCCCCACCT 2084464
Query 105646 CGTGGATGACCTCAAAGAGATTGGTCTCTGGTCCAAGGATATGAAG 105691
| | ||||| | ||||| || || ||| |||| ||||||
Sbjct 2084465 GCTCAAAGACCTGACAGAGAGGGGCCTGTGGAATGAGGAGATGAAG 2084510
>seq3467
Length=3272559
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Plus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|| ||||| ||| ||||| ||||||||||| ||||| ||| ||| || | |||||
Sbjct 2318174 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTG 2318233
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
|||||| |||| || ||||| || || ||||||||||||||| ||| | ||||||
Sbjct 2318234 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 2318293
Query 94936 G 94936
|
Sbjct 2318294 G 2318294
Score = 87.8 bits (96), Expect = 2e-12
Identities = 92/121 (76%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 94816 GCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTC 94875
|| ||||| ||| ||||| ||||||||||| ||||| ||| ||| || | |||||
Sbjct 2328776 GCCTTTGCCGCTGTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTG 2328717
Query 94876 AAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAG 94935
|||||| |||| || ||||| || || ||||||||||||||| ||| | ||||||
Sbjct 2328716 AAGAAGAGAGGCCTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAG 2328657
Query 94936 G 94936
|
Sbjct 2328656 G 2328656
>seq1157
Length=2784775
Score = 86.0 bits (94), Expect = 7e-12
Identities = 112/155 (72%), Gaps = 0/155 (0%)
Strand=Plus/Plus
Query 104886 TGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATGCTTTACAAAG 104945
||||| | || || | |||| || || || |||||||||||||||||| ||||||| |
Sbjct 2749473 TGTGGTACGCCATCATTGAGTCGCAGACAGAAACTGGTACACCATACATGGTTTACAAGG 2749532
Query 104946 ACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCT 105005
| ||||| ||| |||||||||||| | || |||| ||||| |||||| |
Sbjct 2749533 ATGCCTGCAACAGAAAGAGTAATCAGCAAAACCTGGGCACTATCAAATCCAGCAATCTGT 2749592
Query 105006 GTACAGAAATCTTGGAATTTACAGACAAAGATGAG 105040
| ||||| ||| | || | || ||||||||||
Sbjct 2749593 GCACAGAGATCGTAGAGTACACGAGCAAAGATGAG 2749627
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 583234881348200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |