Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_028108.1
Length=171454
Score E
Sequences producing significant alignments: (Bits) Value
seq3478 327 1e-84
seq2977 102 9e-17
seq3467 95.1 1e-14
>seq3478
Length=3494213
Score = 327 bits (362), Expect = 1e-84
Identities = 921/1404 (66%), Gaps = 45/1404 (3%)
Strand=Plus/Minus
Query 78525 CCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTG 78584
|||||| |||||||||| | ||||| | ||||| | ||||||||| |||| ||||||
Sbjct 2084426 CCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTG 2084367
Query 78585 GGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTT 78644
|||||| ||||| || ||||| || | | ||| || |||| | ||||| |
Sbjct 2084366 GGCGGTGGAGGCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGC 2084307
Query 78645 GATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTC 78698
||||| |||| || | |||||| | || | | || || ||||||||||
Sbjct 2084306 GATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTC 2084247
Query 78699 CGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTC 78758
|| || || |||| | ||||||| || | | ||||||| || | || |||
Sbjct 2084246 GTACTGGAGAATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGAGCTC 2084187
Query 78759 CTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTT 78818
||| || ||||| | | || || || | |||| || ||| ||||| |
Sbjct 2084186 GGCGGCCAGCTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGAT 2084127
Query 78819 GTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGC 78878
||||||| | |||| || || || | | | | | ||||| |||| ||
Sbjct 2084126 GTTGAGCAGTTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAAGCATCAGC 2084067
Query 78879 CAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTC 78938
|| |||||||| ||||| | ||||| | |||||||||||| | | | ||| | ||
Sbjct 2084066 CAATCCCTGGACCCCGATTCCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTC 2084007
Query 78939 GGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGA---CCCGAGT 78995
|||||| |||| ||||| || ||||| ||| | |||| | | ||
Sbjct 2084006 CACCGGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTTCC---TGACAATTACTTTGGT 2083950
Query 78996 CACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGA----TGA-----AAGTCGG 79046
||| |||||| || ||| || ||| | | ||| | || |
Sbjct 2083949 CACGGATGCCAATTTTTTAAAGTCATAAG----TCCGCTCAGGGGTGACGTACATGTTGA 2083894
Query 79047 TAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGAT 79106
|| |||| | ||||| ||||| || ||| ||||||| ||||| ||||| |||
Sbjct 2083893 GAGCGACAGAG--GCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGAT 2083836
Query 79107 TTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTT 79166
||| ||||| | || ||||||||||||| | |||| ||||||||||||| |||
Sbjct 2083835 TTCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTT 2083776
Query 79167 ACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCC 79226
||||| || |||||| |||||||||||||||||| || ||| || || | |
Sbjct 2083775 GCAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGC 2083716
Query 79227 GTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCG 79286
| ||| | | | | ||| || || ||| || |||| | || |
Sbjct 2083715 ATACCATAGCTGCTGAGCCTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGT 2083656
Query 79287 GTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCA 79346
||| | || | || ||||||| || || ||| || ||||| ||| ||| ||
Sbjct 2083655 GTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACA 2083596
Query 79347 CATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAG 79406
||||||| |||||| |||| ||||| ||| || |||||||||||| |||||||||||
Sbjct 2083595 CATCAGGGACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAG 2083536
Query 79407 GGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAG 79466
||| ||| ||||| | | ||| |||||| | ||| |||| |||||| ||
Sbjct 2083535 GGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAG 2083476
Query 79467 AAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTT 79526
||||| | | ||| |||||| |||||||| || |||||||| | || | ||
Sbjct 2083475 GAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTT 2083416
Query 79527 GCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGAT 79586
| ||| ||||| | || || || || ||||||||| |||| | | ||| || ||||
Sbjct 2083415 GTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAG 2083356
Query 79587 GCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGA--G 79644
|||| || |||||| || ||| || |||| |||| |||| | || | |
Sbjct 2083355 CCCGTTGGAACAGCCGTTGGTGCCGGCGA----TGTA--GCTC-CCCG-TGGATCTAATG 2083304
Query 79645 CAGTGGATT------CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGC 79698
||| || | || || || || | | ||||||||| | ||||| | ||| |||
Sbjct 2083303 CAGCTGACTGCCACGCCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTTAGC 2083244
Query 79699 GTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATC 79758
|| |||||||| |||||||| ||| |||||||| |||| |||||||||||| |||| |
Sbjct 2083243 GTGTCGTAGATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGC 2083184
Query 79759 TGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGG 79818
|| || |||| || || || |||||||||||||| | ||||| ||||| |||| |
Sbjct 2083183 TGCGGCCTGTTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCT 2083124
Query 79819 CTCATCAGATCGTACGTCTCCTTGAC-GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGC 79877
|| ||| | ||| ||||| |||| || | |||| |||||||| || || ||
Sbjct 2083123 GACAGCAGGTTGTAGGTCTCGATGACTGCTTCGATATCCGTC-CCGTGGATTCCCACAGC 2083065
Query 79878 GACGCGCATGAAGAGGTACTGGGG 79901
|| | ||||| | || ||| ||
Sbjct 2083064 CACCCTCATGAGCATGTGCTGCGG 2083041
Score = 257 bits (284), Expect = 2e-63
Identities = 909/1395 (65%), Gaps = 45/1395 (3%)
Strand=Plus/Plus
Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACG-ACCTCCCGCGAGT 19161
|| ||| || | ||||| | || || || || ||||| || |||| | || |||
Sbjct 2083041 CCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGG-GACGGATATCGAAGCAGT 2083099
Query 19162 CCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221
| |||||| ||| ||||| || |||||| ||||| ||||| | |||||||| ||
Sbjct 2083100 CATCGAGACCTACAACCTGCTGTCAGAGAAGTGGTTCACCCACGCCTCCCCGACCCTCTT 2083159
Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281
||| || || || |||| |||||| |||| ||||| ||||| | || |||||||||||
Sbjct 2083160 CAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 2083219
Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341
|||||| ||||| |||||||| ||||| ||| | ||||| | ||||||||| | | ||
Sbjct 2083220 CAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGG 2083279
Query 19342 GGGTATCGG-GATCCA--CTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398
|| || || | || | ||| | || | || | || | ||| || ||
Sbjct 2083280 AGGGATTGGCGTGGCAGTCAGCTGCATTA---GATCCACGGGGAGCTACATCGCCGGCAC 2083336
Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458
||||| || |||| ||||||||||| | | || | ||||||||| || | ||
Sbjct 2083337 CAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTA 2083396
Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518
|| | ||||||||| |||| | ||| | |||||||| ||||| ||||| |||||
Sbjct 2083397 TGTTGATCAGGGGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCA 2083456
Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578
| || || | || ||||| || ||| |||| ||| | |||||| |||
Sbjct 2083457 CTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGC 2083516
Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638
| ||||| ||| ||| ||||||| || ||||| |||||| || ||| ||||| |
Sbjct 2083517 CAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAA 2083576
Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698
|||||| ||| ||||||||| ||| ||| ||||| || || || || || ||
Sbjct 2083577 CGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGA 2083636
Query 19699 GGCGTTCAATGAGTTGT--ACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTC 19756
|| ||| | || | | ||| || | | || |||| || | ||| |||||
Sbjct 2083637 GGAGTTTGAAGAACTCTACACCAGATATGAGAAG--GAGGGGAGGGTGAAGCGTGTGGTG 2083694
Query 19757 CGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTAC 19816
||| | | | | ||| | || || | ||| || ||||| || ||||||
Sbjct 2083695 AAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTAC 2083754
Query 19817 ATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAG 19876
||| |||||| || ||| ||| ||| || ||| |||| | ||| | ||||||
Sbjct 2083755 ATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAG 2083814
Query 19877 TCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGC-CGGACGAGACTGCCGTGTG 19935
| |||||| || || |||||| | || || | ||| ||||||| || || ||
Sbjct 2083815 TGCAGCAACCTCTGCACGGAAATCGTCGA-GTACACTAGCAAGGACGAGGTGGCGGTTTG 2083873
Query 19936 TAATCTGGCGTCCCTGTGCCTGCCGAC--TTTCGTCAAGGCCT---CCTCCTT-CGACTT 19989
|||||||| | |||| || | || | |||| | ||| | ||| |||||
Sbjct 2083874 CAATCTGGC--CTCTGTCGCTCTCAACATGTACGTC-ACCCCTGAGCGGACTTATGACTT 2083930
Query 19990 TGCCAAATTGTACGAGGTGACCCGGG---TCGTCACGCGTAATCTGAATCGCGTCATCGA 20046
| |||||| |||||| | | |||| | || |||| || |||||
Sbjct 2083931 TAAAAAATTGGCATCCGTGACCAAAGTAATTGTCA---GGAACTTGAACAAGGTTATCGA 2083987
Query 20047 TCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGC 20106
|||| |||||| || | || | | |||||| ||||||||| ||||||| |
Sbjct 2083988 CATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAGG 2084047
Query 20107 GATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCT-CGGCCTCTCATTCGACGATC 20165
||||| |||||||| |||| || | |||||| | | || || | || || |
Sbjct 2084048 AATCGGGGTCCAGGGATTGGCTGATGCTTTCATCCTTATGCGTTATC-CCTTTGAAAGCC 2084106
Query 20166 CCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGG 20225
|| |||| | |||||||| ||||| ||| | |||| | || || |||
Sbjct 2084107 CCGAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTATGCCGC---TTTGG 2084163
Query 20226 AATCG---TGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCG 20282
|| || ||||| || ||| ||| |||| | || ||||||| | | || ||||| |
Sbjct 2084164 AAGCGAGCTGCGAGCTGGCCGCCGAGCTCGGCACCTATGAGACGTACGAAGGCTCGCCGG 2084223
Query 20283 CGTCCGAGGGTATCCTCCAGCCGGACATGTGG-----GGCGTC-ACTGA-GAATGAGTTT 20335
| |||| || |||||| ||||||||| | || | || || || | |
Sbjct 2084224 TGAGTAAGGGCATTCTCCAGTACGACATGTGGGAGAAGACGCCAACGGACCTGTGGGACT 2084283
Query 20336 TGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCG 20395
| ||| || |||| ||||| | || || | | ||| |||| | |
Sbjct 2084284 GGAAGC-TGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTGCTGTCC 2084342
Query 20396 CCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTAC 20455
|| ||||| || ||||| |||||||||||| |||| ||||||||| | ||||| | |||
Sbjct 2084343 CCAATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTAC 2084402
Query 20456 ACGACCAACATCTAC 20470
|| | ||||||||||
Sbjct 2084403 ACAAGCAACATCTAC 2084417
>seq2977
Length=7416971
Score = 102 bits (112), Expect = 9e-17
Identities = 95/121 (79%), Gaps = 0/121 (0%)
Strand=Plus/Minus
Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050
||||||||| |||||||| |||||||||||||| || || |||||| | ||||||
Sbjct 6481975 GCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGTTCATTTGCTGCTATCTACTGGCTG 6481916
Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110
|| ||| | || | ||||| ||||| || | |||||||||||| ||| | ||||||||
Sbjct 6481915 AAGAAGAGGGGGTTAATGCCTGGCCTTAGCTACTCCAACGAGCTCATTAGCAGGGACGAG 6481856
Query 60111 G 60111
|
Sbjct 6481855 G 6481855
>seq3467
Length=3272559
Score = 95.1 bits (104), Expect = 1e-14
Identities = 95/120 (79%), Gaps = 4/120 (3%)
Strand=Plus/Plus
Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389
|| ||| | ||| | |||||||| |||| ||||||| |||||| |||| || ||||||
Sbjct 2319089 ATCTACCGGGTGGAGAACCCTTTTGACTTCATGGAGAACATCTCCCTGGAGGGAAAGACC 2319148
Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAGCACATGGTCGTCGAGGGCGACGCC 60449
|||||||||||||||||||| || || || || || |||| ||| || |||||||||
Sbjct 2319149 AACTTCTTTGAGAAGCGGGTGGGCGAGTA-CCAGAG--GATGGGCGT-GATGGCGACGCC 2319204
Score = 95.1 bits (104), Expect = 1e-14
Identities = 95/120 (79%), Gaps = 4/120 (3%)
Strand=Plus/Minus
Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389
|| ||| | ||| | |||||||| |||| ||||||| |||||| |||| || ||||||
Sbjct 2327861 ATCTACCGGGTGGAGAACCCTTTTGACTTCATGGAGAACATCTCCCTGGAGGGAAAGACC 2327802
Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAGCACATGGTCGTCGAGGGCGACGCC 60449
|||||||||||||||||||| || || || || || |||| ||| || |||||||||
Sbjct 2327801 AACTTCTTTGAGAAGCGGGTGGGCGAGTA-CCAGAG--GATGGGCGT-GATGGCGACGCC 2327746
Score = 93.3 bits (102), Expect = 5e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Plus
Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062
||||| || ||||||||||| || |||||| || || |||||||| || ||| | |||
Sbjct 2318186 GTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGGC 2318245
Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111
|| ||||| ||||||| |||||||||||||| || | | |||||||
Sbjct 2318246 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 2318294
Score = 93.3 bits (102), Expect = 5e-14
Identities = 86/109 (79%), Gaps = 0/109 (0%)
Strand=Plus/Minus
Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062
||||| || ||||||||||| || |||||| || || |||||||| || ||| | |||
Sbjct 2328764 GTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGGC 2328705
Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111
|| ||||| ||||||| |||||||||||||| || | | |||||||
Sbjct 2328704 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 2328656
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548500424929200
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