Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3478 327 1e-84 seq2977 102 9e-17 seq3467 95.1 1e-14 >seq3478 Length=3494213 Score = 327 bits (362), Expect = 1e-84 Identities = 921/1404 (66%), Gaps = 45/1404 (3%) Strand=Plus/Minus Query 78525 CCGGCGCAGGTAGATGTTGGTCGTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTG 78584 |||||| |||||||||| | ||||| | ||||| | ||||||||| |||| |||||| Sbjct 2084426 CCGGCGGGTGTAGATGTTGCTTGTGTAGGCCTCGATGGACTCGTTGTTGCCCAGGATCTG 2084367 Query 78585 GGCGGTCGAGGCGGTCGGCATGGGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTT 78644 |||||| ||||| || ||||| || | | ||| || |||| | ||||| | Sbjct 2084366 GGCGGTGGAGGCCGTGGGCATTGGGGACAGCAGCAGGCTGTTCCTCACGCCATGTTTGGC 2084307 Query 78645 GATCTCGACCTTTAGG------CCGTCCCAAAATTCATTCGCCGCGATCCCCCACATGTC 78698 ||||| |||| || | |||||| | || | | || || |||||||||| Sbjct 2084306 GATCTTCTCCTTCAGCAGCTTCCAGTCCCACAGGTCCGTTGGCGTCTTCTCCCACATGTC 2084247 Query 78699 CGGTTGAAGGATACCCTCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTC 78758 || || || |||| | ||||||| || | | ||||||| || | || ||| Sbjct 2084246 GTACTGGAGAATGCCCTTACTCACCGGCGAGCCTTCGTACGTCTCATAGGTGCCGAGCTC 2084187 Query 78759 CTTGGCGAGTTCGCATGACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTT 78818 ||| || ||||| | | || || || | |||| || ||| ||||| | Sbjct 2084186 GGCGGCCAGCTCGCAGCTCGCTTCCAAAGCGGCATAATACATAGTCTCAAAGATCTGGAT 2084127 Query 78819 GTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAAGGCCGAGCATCATGAAGACATCGGC 78878 ||||||| | |||| || || || | | | | | ||||| |||| || Sbjct 2084126 GTTGAGCAGTTGAGCCTCGGGGCTTTCAAAGGGATAACGCATAAGGATGAAAGCATCAGC 2084067 Query 78879 CAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTC 78938 || |||||||| ||||| | ||||| | |||||||||||| | | | ||| | || Sbjct 2084066 CAATCCCTGGACCCCGATTCCTATCGGCCTGTGGCGCATGTTCGACCTCCTGGCTTCTTC 2084007 Query 78939 GGTCGGGTAAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGA---CCCGAGT 78995 |||||| |||| ||||| || ||||| ||| | |||| | | || Sbjct 2084006 CACCGGGTAGTAGTTGATGTCGATAACCTTGTTCAAGTTCC---TGACAATTACTTTGGT 2083950 Query 78996 CACCTCGTACAATTTGGCGAAATCAAAATGATTTCCTTTGA----TGA-----AAGTCGG 79046 ||| |||||| || ||| || ||| | | ||| | || | Sbjct 2083949 CACGGATGCCAATTTTTTAAAGTCATAAG----TCCGCTCAGGGGTGACGTACATGTTGA 2083894 Query 79047 TAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGGGCTAGAAACCTCGATGAT 79106 || |||| | ||||| ||||| || ||| ||||||| ||||| ||||| ||| Sbjct 2083893 GAGCGACAGAG--GCCAGATTGCAAACCGCCACCTCGTCCTTGCTAGTGTACTCGACGAT 2083836 Query 79107 TTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTTCTGGTTGCTCTTCTCGTT 79166 ||| ||||| | || ||||||||||||| | |||| ||||||||||||| ||| Sbjct 2083835 TTCCGTGCAGAGGTTGCTGCACTTGATGGTGCCCAGATTCTGCTGGTTGCTCTTCCTGTT 2083776 Query 79167 ACAGGCGTCCTTGTAGCACATGTACGGCGTCCCGGTCTCAACCTGACTCTTGAGAACGCC 79226 ||||| || |||||| |||||||||||||||||| || ||| || || | | Sbjct 2083775 GCAGGCATCTTTGTAGACCATGTACGGCGTCCCGGTTTCTGTCTGCGACTCGATGATTGC 2083716 Query 79227 GTCCCAGATGTCCCGGGCCCGGACAACCTTCTTGTACCGACCCTGTGCGACGTACGTCCG 79286 | ||| | | | | ||| || || ||| || |||| | || | Sbjct 2083715 ATACCATAGCTGCTGAGCCTTCACCACACGCTTCACCCTCCCCTCCTTCTCATATCTGGT 2083656 Query 79287 GTACAACTCGTTGAAAGCCTCCCCATAGACATCGGGCAGGCCCGGGCACTCGTGCGGGCA 79346 ||| | || | || ||||||| || || ||| || ||||| ||| ||| || Sbjct 2083655 GTAGAGTTCTTCAAACTCCTCCCCCCAGCACTCATCCAGCCCGGGGCAGTCGGCCGGACA 2083596 Query 79347 CATCAGGTGCCAGTCCTCGTCCTTCTCAACCTTCTCCATGAAGAGGTCCGGGATCCACAG 79406 ||||||| |||||| |||| ||||| ||| || |||||||||||| ||||||||||| Sbjct 2083595 CATCAGGGACCAGTCTTCGTTGTTCTCCACCCGCTTCATGAAGAGGTCAGGGATCCACAG 2083536 Query 79407 GGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTCGCCCTGGTTCAGACGCAGCTCGAG 79466 ||| ||| ||||| | | ||| |||||| | ||| |||| |||||| || Sbjct 2083535 GGCGTAGAACAGGTCCCTGGCTCGCTGCTCCTCCTTTCCCGTGTTCTTCTTCAGCTCCAG 2083476 Query 79467 AAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATAGATGGCGAACGAACCCTTGCGCTT 79526 ||||| | | ||| |||||| |||||||| || |||||||| | || | || Sbjct 2083475 GAAGTCAAACACATCGAAGTGCCAGGGCTCCAGGTACATGGCGAAGGCGCCGGGTCTTTT 2083416 Query 79527 GCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTTGAAAACTCGGAGCATGGGCACGAT 79586 | ||| ||||| | || || || || ||||||||| |||| | | ||| || |||| Sbjct 2083415 GTTGCCCCCCTGATCAACATAACGCGCTGTGTTGTTGTAAACCCTCAACATTGGGACGAG 2083356 Query 79587 GCCGTCGGCGACGCCGTTCGTCCCGTTGATTCGTGTACCGCTCGCCCGAATGTTCGA--G 79644 |||| || |||||| || ||| || |||| |||| |||| | || | | Sbjct 2083355 CCCGTTGGAACAGCCGTTGGTGCCGGCGA----TGTA--GCTC-CCCG-TGGATCTAATG 2083304 Query 79645 CAGTGGATT------CCGATGCCCCCGGACCACTTGGAGATGTGCGCGCACTCCTTGAGC 79698 ||| || | || || || || | | ||||||||| | ||||| | ||| ||| Sbjct 2083303 CAGCTGACTGCCACGCCAATCCCTCCAGCTGATTTGGAGATGAGGGCGCAATGCTTTAGC 2083244 Query 79699 GTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCAGCTCGACATC 79758 || |||||||| |||||||| ||| |||||||| |||| |||||||||||| |||| | Sbjct 2083243 GTGTCGTAGATCCCCTCGATGCTGTCATCCTTCATGGCGAGCAGGAAGCAGCTGGACAGC 2083184 Query 79759 TGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTGG 79818 || || |||| || || || |||||||||||||| | ||||| ||||| |||| | Sbjct 2083183 TGCGGCCTGTTGGTTCCAGCATTGAAGAGGGTCGGGGAGGCGTGGGTGAACCACTTCTCT 2083124 Query 79819 CTCATCAGATCGTACGTCTCCTTGAC-GCGCGGGAGGTCGTCGCCGTGGATGCCGACCGC 79877 || ||| | ||| ||||| |||| || | |||| |||||||| || || || Sbjct 2083123 GACAGCAGGTTGTAGGTCTCGATGACTGCTTCGATATCCGTC-CCGTGGATTCCCACAGC 2083065 Query 79878 GACGCGCATGAAGAGGTACTGGGG 79901 || | ||||| | || ||| || Sbjct 2083064 CACCCTCATGAGCATGTGCTGCGG 2083041 Score = 257 bits (284), Expect = 2e-63 Identities = 909/1395 (65%), Gaps = 45/1395 (3%) Strand=Plus/Plus Query 19103 CCTCAGTACCTTTTCATGCGAGTCGCGGTCGGCATCCATGGCGACG-ACCTCCCGCGAGT 19161 || ||| || | ||||| | || || || || ||||| || |||| | || ||| Sbjct 2083041 CCGCAGCACATGCTCATGAGGGTGGCTGTGGGAATCCACGG-GACGGATATCGAAGCAGT 2083099 Query 19162 CCGCGAGACATACGACCTGATGAGCCAGAAGTTCTTCACGCACGCGACGCCGACCCTTTT 19221 | |||||| ||| ||||| || |||||| ||||| ||||| | |||||||| || Sbjct 2083100 CATCGAGACCTACAACCTGCTGTCAGAGAAGTGGTTCACCCACGCCTCCCCGACCCTCTT 2083159 Query 19222 CAACGCCGGTACGAACAACCCGCAGATGTCGAGCTGTTTCCTAGTGGCTATGAAGGATGA 19281 ||| || || || |||| |||||| |||| ||||| ||||| | || ||||||||||| Sbjct 2083160 CAATGCTGGAACCAACAGGCCGCAGCTGTCCAGCTGCTTCCTGCTCGCCATGAAGGATGA 2083219 Query 19282 CAGCATTGAGGGCATCTACGAGACGCTCAAGGAGTGCGCGCACATCTCCAAGTGGTCCGG 19341 |||||| ||||| |||||||| ||||| ||| | ||||| | ||||||||| | | || Sbjct 2083220 CAGCATCGAGGGGATCTACGACACGCTAAAGCATTGCGCCCTCATCTCCAAATCAGCTGG 2083279 Query 19342 GGGTATCGG-GATCCA--CTGCTCGAATATCCGGTCGAGTGGTACACGAATCAATGGGAC 19398 || || || | || | ||| | || | || | || | ||| || || Sbjct 2083280 AGGGATTGGCGTGGCAGTCAGCTGCATTA---GATCCACGGGGAGCTACATCGCCGGCAC 2083336 Query 19399 GAACGGAGTAGCCGACGGTATCGTCCCAATGCTCCGCGTCTTCAACAACACGGCCAGGTA 19458 ||||| || |||| ||||||||||| | | || | ||||||||| || | || Sbjct 2083337 CAACGGCTGTTCCAACGGGCTCGTCCCAATGTTGAGGGTTTACAACAACACAGCGCGTTA 2083396 Query 19459 CGTCAACCAGGGGGGCGGCAAACGCAAGGGCTCGTTCGCCATCTACCTCGAGCCATGGCA 19518 || | ||||||||| |||| | ||| | |||||||| ||||| ||||| ||||| Sbjct 2083397 TGTTGATCAGGGGGGCAACAAAAGACCCGGCGCCTTCGCCATGTACCTGGAGCCCTGGCA 2083456 Query 19519 CGCGGACGTCATGGATTTCCTCGAACTGCGCCTGAACCAGGGTGACGAGGAGATGCGCTG 19578 | || || | || ||||| || ||| |||| ||| | |||||| ||| Sbjct 2083457 CTTCGATGTGTTTGACTTCCTGGAGCTGAAGAAGAACACGGGAAAGGAGGAGCAGCGAGC 2083516 Query 19579 TCGCGACCTCTTCACGGCCTTGTGGATTCCGGACCTATTCATGGAGAAGGTTGAGAAGGA 19638 | ||||| ||| ||| ||||||| || ||||| |||||| || ||| ||||| | Sbjct 2083517 CAGGGACCTGTTCTACGCCCTGTGGATCCCTGACCTCTTCATGAAGCGGGTGGAGAACAA 2083576 Query 19639 CGAAGAATGGCACCTGATGTGCCCGCACGAATGCCCTGGCCTACCCGACGTCTACGGCGA 19698 |||||| ||| ||||||||| ||| ||| ||||| || || || || || || Sbjct 2083577 CGAAGACTGGTCCCTGATGTGTCCGGCCGACTGCCCCGGGCTGGATGAGTGCTGGGGGGA 2083636 Query 19699 GGCGTTCAATGAGTTGT--ACCGGACTTACGTAGCCCAGGGCCGGTTCAAGAAGGTGGTC 19756 || ||| | || | | ||| || | | || |||| || | ||| ||||| Sbjct 2083637 GGAGTTTGAAGAACTCTACACCAGATATGAGAAG--GAGGGGAGGGTGAAGCGTGTGGTG 2083694 Query 19757 CGGGCCCGGGACGTCTGGGACCGCGTCCTCAAAAGCCAGGTCGAGACCGGCACACCGTAC 19816 ||| | | | | ||| | || || | ||| || ||||| || |||||| Sbjct 2083695 AAGGCTCAGCAGCTATGGTATGCAATCATCGAGTCGCAGACAGAAACCGGGACGCCGTAC 2083754 Query 19817 ATGTGCTACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAG 19876 ||| |||||| || ||| ||| ||| || ||| |||| | ||| | |||||| Sbjct 2083755 ATGGTCTACAAAGATGCCTGCAACAGGAAGAGCAACCAGCAGAATCTGGGCACCATCAAG 2083814 Query 19877 TCGTCCAACCTGTGTACTGAAATCATGGAGGTTTCCAAGC-CGGACGAGACTGCCGTGTG 19935 | |||||| || || |||||| | || || | ||| ||||||| || || || Sbjct 2083815 TGCAGCAACCTCTGCACGGAAATCGTCGA-GTACACTAGCAAGGACGAGGTGGCGGTTTG 2083873 Query 19936 TAATCTGGCGTCCCTGTGCCTGCCGAC--TTTCGTCAAGGCCT---CCTCCTT-CGACTT 19989 |||||||| | |||| || | || | |||| | ||| | ||| ||||| Sbjct 2083874 CAATCTGGC--CTCTGTCGCTCTCAACATGTACGTC-ACCCCTGAGCGGACTTATGACTT 2083930 Query 19990 TGCCAAATTGTACGAGGTGACCCGGG---TCGTCACGCGTAATCTGAATCGCGTCATCGA 20046 | |||||| |||||| | | |||| | || |||| || ||||| Sbjct 2083931 TAAAAAATTGGCATCCGTGACCAAAGTAATTGTCA---GGAACTTGAACAAGGTTATCGA 2083987 Query 20047 TCGGAACTTTTACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGC 20106 |||| |||||| || | || | | |||||| ||||||||| ||||||| | Sbjct 2083988 CATCAACTACTACCCGGTGGAAGAAGCCAGGAGGTCGAACATGCGCCACAGGCCGATAGG 2084047 Query 20107 GATCGGCGTCCAGGGCCTGGCCGACGTTTTCATGATGCT-CGGCCTCTCATTCGACGATC 20165 ||||| |||||||| |||| || | |||||| | | || || | || || | Sbjct 2084048 AATCGGGGTCCAGGGATTGGCTGATGCTTTCATCCTTATGCGTTATC-CCTTTGAAAGCC 2084106 Query 20166 CCAAGGCGCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGG 20225 || |||| | |||||||| ||||| ||| | |||| | || || ||| Sbjct 2084107 CCGAGGCTCAACTGCTCAACATCCAGATCTTTGAGACTATGTATTATGCCGC---TTTGG 2084163 Query 20226 AATCG---TGCGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCG 20282 || || ||||| || ||| ||| |||| | || ||||||| | | || ||||| | Sbjct 2084164 AAGCGAGCTGCGAGCTGGCCGCCGAGCTCGGCACCTATGAGACGTACGAAGGCTCGCCGG 2084223 Query 20283 CGTCCGAGGGTATCCTCCAGCCGGACATGTGG-----GGCGTC-ACTGA-GAATGAGTTT 20335 | |||| || |||||| ||||||||| | || | || || || | | Sbjct 2084224 TGAGTAAGGGCATTCTCCAGTACGACATGTGGGAGAAGACGCCAACGGACCTGTGGGACT 2084283 Query 20336 TGGAGCGCCCTCAAGGTTGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCG 20395 | ||| || |||| ||||| | || || | | ||| |||| | | Sbjct 2084284 GGAAGC-TGCTGAAGGAGAAGATCGCCAAACATGGCGTGAGGAACAGCCTGCTGCTGTCC 2084342 Query 20396 CCCATGCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTAC 20455 || ||||| || ||||| |||||||||||| |||| ||||||||| | ||||| | ||| Sbjct 2084343 CCAATGCCCACGGCCTCCACCGCCCAGATCCTGGGCAACAACGAGTCCATCGAGGCCTAC 2084402 Query 20456 ACGACCAACATCTAC 20470 || | |||||||||| Sbjct 2084403 ACAAGCAACATCTAC 2084417 >seq2977 Length=7416971 Score = 102 bits (112), Expect = 9e-17 Identities = 95/121 (79%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 59991 GCTTTTGCATGCGTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTC 60050 ||||||||| |||||||| |||||||||||||| || || |||||| | |||||| Sbjct 6481975 GCTTTTGCAGCTGTGGAAGGCATCTTCTTCTCTGGTTCATTTGCTGCTATCTACTGGCTG 6481916 Query 60051 AAAAAGCGTGGCCTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAG 60110 || ||| | || | ||||| ||||| || | |||||||||||| ||| | |||||||| Sbjct 6481915 AAGAAGAGGGGGTTAATGCCTGGCCTTAGCTACTCCAACGAGCTCATTAGCAGGGACGAG 6481856 Query 60111 G 60111 | Sbjct 6481855 G 6481855 >seq3467 Length=3272559 Score = 95.1 bits (104), Expect = 1e-14 Identities = 95/120 (79%), Gaps = 4/120 (3%) Strand=Plus/Plus Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389 || ||| | ||| | |||||||| |||| ||||||| |||||| |||| || |||||| Sbjct 2319089 ATCTACCGGGTGGAGAACCCTTTTGACTTCATGGAGAACATCTCCCTGGAGGGAAAGACC 2319148 Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAGCACATGGTCGTCGAGGGCGACGCC 60449 |||||||||||||||||||| || || || || || |||| ||| || ||||||||| Sbjct 2319149 AACTTCTTTGAGAAGCGGGTGGGCGAGTA-CCAGAG--GATGGGCGT-GATGGCGACGCC 2319204 Score = 95.1 bits (104), Expect = 1e-14 Identities = 95/120 (79%), Gaps = 4/120 (3%) Strand=Plus/Minus Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389 || ||| | ||| | |||||||| |||| ||||||| |||||| |||| || |||||| Sbjct 2327861 ATCTACCGGGTGGAGAACCCTTTTGACTTCATGGAGAACATCTCCCTGGAGGGAAAGACC 2327802 Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAGCACATGGTCGTCGAGGGCGACGCC 60449 |||||||||||||||||||| || || || || || |||| ||| || ||||||||| Sbjct 2327801 AACTTCTTTGAGAAGCGGGTGGGCGAGTA-CCAGAG--GATGGGCGT-GATGGCGACGCC 2327746 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Plus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||| || ||||||||||| || |||||| || || |||||||| || ||| | ||| Sbjct 2318186 GTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGGC 2318245 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 || ||||| ||||||| |||||||||||||| || | | ||||||| Sbjct 2318246 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 2318294 Score = 93.3 bits (102), Expect = 5e-14 Identities = 86/109 (79%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 60003 GTGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGC 60062 ||||| || ||||||||||| || |||||| || || |||||||| || ||| | ||| Sbjct 2328764 GTGGAGGGGATCTTCTTCTCGGGTTCGTTCGCCGCCATCTTCTGGCTGAAGAAGAGAGGC 2328705 Query 60063 CTCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGG 60111 || ||||| ||||||| |||||||||||||| || | | ||||||| Sbjct 2328704 CTGATGCCCGGCCTGACCTTCTCCAACGAGCTCATCAGCAGAGACGAGG 2328656 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548500424929200