Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq3511 111 2e-19 seq1446 107 2e-18 >seq3511 Length=2785928 Score = 111 bits (122), Expect = 2e-19 Identities = 123/164 (75%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 32668 GAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCA 32727 |||| ||||| ||||| ||||| ||||| || || ||||| || ||| | || |||| Sbjct 696756 GAGCTCTGTGGAGGTATTTCATCTCCAAAGGCATTGAGTATCTGGACACTGTGTTTTTCA 696697 Query 32728 TAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGT 32787 | |||| || ||||||||||| || | ||| ||||||| ||||| |||| |||||| Sbjct 696696 TCCTGAGGAAAAAATTTAACCAGGTCACCTTCCTGCACGTCTACCATCATTGCTCCATGT 696637 Query 32788 TTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 | || | | ||||| || || || ||| | |||||||||||| Sbjct 696636 TCACGCTCTGGTGGATTGGCATCAAGTGGGTGGCAGGAGGACAG 696593 >seq1446 Length=1813966 Score = 107 bits (118), Expect = 2e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 32668 GAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATACTATTTTCTTCA 32727 |||| |||||| ||||| ||||| || || || || ||||| || ||| | || |||| Sbjct 709163 GAGCTCTGTGGTGGTATTTCATCTCCAAGGGCATTGAGTATCTGGACACTGTGTTTTTCA 709104 Query 32728 TAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACCATTTTACCATGT 32787 | |||| || ||||||||||| || | ||| | ||||| ||||| |||| |||||| Sbjct 709103 TCTTGAGGAAAAAATTTAACCAGGTCACCTTCCTTCACGTCTACCATCATTGCTCCATGT 709044 Query 32788 TTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACAG 32831 | || | | ||||| || || || ||| | |||||||||||| Sbjct 709043 TCACGCTCTGGTGGATTGGCATCAAGTGGGTGGCAGGAGGACAG 709000 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 603153996153200