Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_028461.1 Length=127011 Score E Sequences producing significant alignments: (Bits) Value seq3011 145 6e-30 seq3222 105 5e-18 >seq3011 Length=8691009 Score = 145 bits (160), Expect = 6e-30 Identities = 138/175 (79%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 30223 CATGTCCGTGTACTCTGCTCCGAAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTC 30282 |||||| ||||||||||| || || |||||||||||||| || ||||| || || ||||| Sbjct 8387131 CATGTCTGTGTACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTC 8387072 Query 30283 TCCCTCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTC 30342 |||||||| |||| ||| || ||||||| |||||| | || |||||||| || Sbjct 8387071 ACCCTCTTCTCTGTCAGTGAACCCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATC 8387012 Query 30343 CCAGATCTTTACCCCCTTCTCAGAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30396 ||||||||| || || || || || ||||| ||||| ||||| || |||| |||| Sbjct 8387011 CCAGATCTTCACTCCTTTTTCTGACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 8386957 Score = 123 bits (136), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 29942 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGT 30001 || || || | ||| || |||||||| || || || || |||||||||||||| || || Sbjct 8387944 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 8387885 Query 30002 ACCCCGAGCCCCATGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTC 30061 || || | ||||| || | || | |||||| ||||||||||| ||||| ||||||| | Sbjct 8387884 ACTCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCAC 8387825 Query 30062 ACGTAAAACTGACACATGGCGTGGCACGGAGGAAGAGCCAT 30102 ||||| ||||| || | |||||||| || || || ||||| Sbjct 8387824 ACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 8387784 >seq3222 Length=554146 Score = 105 bits (116), Expect = 5e-18 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 110406 CTCCCTGCTGAGGACTACGTTTATCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 110465 || |||||||||||| | ||| | |||| ||||||||||| ||||| || |||||||| Sbjct 272003 CTTCCTGCTGAGGACAATGTTGACTCTGTTGCTCAGAGGTCTGTTCTTCTCTGGGATGGA 272062 Query 110466 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTGCCT 110508 | |||| ||||| | ||||| |||||||| |||||||||||| Sbjct 272063 GTACCACGTCTTCTTGCCCATGATCACCACATTCTGCTTGCCT 272105 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 110159 ACTCTGGCAGTAGACGATATCTCTCTAGACTTTTCTCTGGGAGAAAAGTGTCGCACGCAA 110218 |||||||||| ||||||||| | || ||||| |||| || | || ||||||||| || Sbjct 271314 ACTCTGGCAGCAGACGATATTTGTCCAGACTGATCTCAGGTAAGAATGTGTCGCACTGAA 271373 Query 110219 ATTGCGTCGACACGTGAGTGACAAACAGCCTCTTTATCCCCGGGCTCTCCATGAGCTCC 110277 | ||| || | |||||||||||||| || | || |||| |||| |||| | |||| Sbjct 271374 ACTGCTTCAGAATTTGAGTGACAAACAGTCTTCTCATTCCCGTGCTCCCCATCATCTCC 271432 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406292795967060