Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq3011 104 2e-17 >seq3011 Length=8691009 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381 || |||||||||||||| || |||||||||| |||||||||||||| | |||||| | Sbjct 8386997 GGAGTGAAGATCTGGGATGCCAACGGGTCTCGGGACTTTCTGGACAACCTTGGGTTCACT 8387056 Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441 | || ||||| ||| | || || || || || ||||||||||| |||||||| || Sbjct 8387057 GACAGAGAAGAGGGTGACCTAGGTCCTGTGTATGGTTTCCAGTGGAGGCACTTTGGTGCA 8387116 Query 34442 GAGTA 34446 ||||| Sbjct 8387117 GAGTA 8387121 Score = 104 bits (114), Expect = 2e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958 ||||| || |||||||| ||||||||||| || || || || || | ||| ||||| || Sbjct 8387121 TACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTCACCCTCTTCT 8387062 Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018 | | |||||| | |||||||||||||| |||||||||| || |||||||||||| Sbjct 8387061 CTGTCAGTGAACCCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATCCCAGATCTTC 8387002 Query 7019 ACCCC 7023 || || Sbjct 8387001 ACTCC 8386997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448242480339600