Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06]
3,555 sequences; 859,842,118 total letters
Query= NC_029132.1
Length=140122
Score E
Sequences producing significant alignments: (Bits) Value
seq3011 104 2e-17
>seq3011
Length=8691009
Score = 104 bits (114), Expect = 2e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 34322 GGGGTGAAGATCTGGGACGCTCACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCA 34381
|| |||||||||||||| || |||||||||| |||||||||||||| | |||||| |
Sbjct 8386997 GGAGTGAAGATCTGGGATGCCAACGGGTCTCGGGACTTTCTGGACAACCTTGGGTTCACT 8387056
Query 34382 TCTCGGGAGGAGGGCGACTTGGGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCG 34441
| || ||||| ||| | || || || || || ||||||||||| |||||||| ||
Sbjct 8387057 GACAGAGAAGAGGGTGACCTAGGTCCTGTGTATGGTTTCCAGTGGAGGCACTTTGGTGCA 8387116
Query 34442 GAGTA 34446
|||||
Sbjct 8387117 GAGTA 8387121
Score = 104 bits (114), Expect = 2e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 6899 TACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCC 6958
||||| || |||||||| ||||||||||| || || || || || | ||| ||||| ||
Sbjct 8387121 TACTCTGCACCAAAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTCACCCTCTTCT 8387062
Query 6959 CGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTC 7018
| | |||||| | |||||||||||||| |||||||||| || ||||||||||||
Sbjct 8387061 CTGTCAGTGAACCCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATCCCAGATCTTC 8387002
Query 7019 ACCCC 7023
|| ||
Sbjct 8387001 ACTCC 8386997
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448242480339600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |