Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq3011 123 2e-23 seq3222 100 2e-16 >seq3011 Length=8691009 Score = 123 bits (136), Expect = 2e-23 Identities = 124/161 (77%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 29714 AGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGC 29773 || || || | ||| || |||||||| || || || || |||||||||||||| || ||| Sbjct 8387944 AGTCCTGTAATGTGTGCAATCATGTAGGTAAGAAGTGAATAGCTGGCGATGTTGAAAGGC 8387885 Query 29774 ACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTGGCACGAGAGCTCTCCGTCGCTC 29833 || || | ||||| || |||| | |||||| ||||| ||||| ||||| ||||||| | Sbjct 8387884 ACTCCTAATCCCATATCAGCTGAGCGCTGGTACAGCTGACACGACAGCTCGCCGTCGCAC 8387825 Query 29834 ACGTAAAACTGACACATGGCATGGCACGGAGGAAGGGCCAT 29874 ||||| ||||| || | || ||||| || || || ||||| Sbjct 8387824 ACGTAGAACTGGCAGAGTGCGTGGCAGGGGGGCAGCGCCAT 8387784 Score = 120 bits (132), Expect = 2e-22 Identities = 119/153 (78%), Gaps = 1/153 (1%) Strand=Plus/Minus Query 30017 AAATGCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAG 30076 || |||||||||||||| || ||||| || || ||||| |||||||| |||| ||| Sbjct 8387109 AAGTGCCTCCACTGGAAACCATACACAGGACCTAGGTCACCCTCTTCTCTGTCAGTGAAC 8387050 Query 30077 CCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG 30136 || ||||||| |||||| | || |||||||| ||||||||||| || || || || Sbjct 8387049 CCAAGGTTGTCCAGAAAGTCCCGAGACCCGTTGGCATCCCAGATCTTCACTCCTTTTTCT 8386990 Query 30137 GAGAGCTCTTTGGAGTTTGTGGA-CCCTCTGAC 30168 || ||||| ||||| ||||| || |||| |||| Sbjct 8386989 GACAGCTCCTTGGAATTTGTTGATCCCTGTGAC 8386957 >seq3222 Length=554146 Score = 100 bits (110), Expect = 2e-16 Identities = 84/103 (82%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 114289 CTCCCTGCTGAGGACTACGTTTAGCCTGTCTCTCAGAGGTCTATTCTTTTCGGGGATGGA 114348 || |||||||||||| | ||| | |||| ||||||||||| ||||| || |||||||| Sbjct 272003 CTTCCTGCTGAGGACAATGTTGACTCTGTTGCTCAGAGGTCTGTTCTTCTCTGGGATGGA 272062 Query 114349 GAACCAAGTCTTTCTACCCATTATCACCACGTTCTGCTTACCT 114391 | |||| ||||| | ||||| |||||||| |||||||| ||| Sbjct 272063 GTACCACGTCTTCTTGCCCATGATCACCACATTCTGCTTGCCT 272105 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406145602344730