Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Maylandia_20zebra_20[genbank_20GCA_5F000238955.3_202015-10-06] 3,555 sequences; 859,842,118 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq3467 89.7 4e-13 >seq3467 Length=3272559 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Minus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 ||||||||||| || || ||||| || || || | |||||||| | |||||||| || Sbjct 2318292 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 2318233 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || ||||| || || || || ||||| || || || || |||||||| || Sbjct 2318232 AGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGGCC 2318173 Query 4692 AC 4693 || Sbjct 2318172 AC 2318171 Score = 89.7 bits (98), Expect = 4e-13 Identities = 93/122 (76%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 4572 TCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTA 4631 ||||||||||| || || ||||| || || || | |||||||| | |||||||| || Sbjct 2328658 TCGTCTCTGCTGATGAGCTCGTTGGAGAAGGTCAGGCCGGGCATCAGGCCTCTCTTCTTC 2328717 Query 4632 AGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCT 4691 ||||| || || ||||| || || || || ||||| || || || || |||||||| || Sbjct 2328718 AGCCAGAAGATGGCGGCGAACGAACCCGAGAAGAAGATCCCCTCCACAGCGGCAAAGGCC 2328777 Query 4692 AC 4693 || Sbjct 2328778 AC 2328779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427031097408815